Query FD01848386_04431 DUF4150 domain-containing protein
Match_columns 81
No_of_seqs 106 out of 235
Neff 5.65291
Searched_HMMs 86581
Date Tue Feb 27 21:06:40 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/4270191.hhr -oa3m ../results/4270191.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF11197.12 ; DUF2835 ; Protein 85.3 3.4 4E-05 26.1 3.7 41 29-72 18-65 (71)
2 PF08968.14 ; DUF1885 ; Domain 70.3 3.9 4.5E-05 29.5 0.8 43 7-51 32-77 (140)
3 1T6A_A RBSTP2229 gene product; 68.8 5 5.8E-05 28.5 1.1 40 7-51 30-71 (126)
4 PF07753.15 ; DUF1609 ; Protein 64.6 12 0.00014 29.0 2.4 73 5-79 60-149 (225)
5 8B61_A Conserved hypothetical 63.8 35 0.00041 25.6 4.7 33 32-64 193-231 (238)
6 5I4Q_A Contact-dependent inhib 53.8 88 0.001 20.0 5.8 69 2-81 20-92 (92)
7 6R2H_B HmuY protein; Porphyrom 50.7 74 0.00085 23.6 4.5 32 32-64 152-185 (194)
8 PF08884.15 ; Flagellin_D3 ; Fl 41.8 1.3E+02 0.0015 20.8 4.2 31 37-73 46-77 (98)
9 PF14064.10 ; HmuY ; HmuY prote 40.4 1.5E+02 0.0017 20.2 4.5 32 33-64 116-149 (151)
10 6EWM_F Haemophore HmuY; heme-b 39.0 1.6E+02 0.0018 21.0 4.6 32 32-64 151-184 (191)
11 PF11528.12 ; DUF3224 ; Protein 36.4 1.5E+02 0.0017 20.3 4.0 26 40-65 53-78 (128)
12 2OOJ_A Hypothetical protein; S 29.4 2.2E+02 0.0025 19.8 3.9 26 40-65 59-84 (141)
13 PF18356.5 ; DUF5608 ; Domain o 29.0 2.3E+02 0.0026 17.4 3.5 33 41-73 7-42 (56)
14 PF10262.13 ; Rdx ; Rdx family 27.5 2.2E+02 0.0025 17.2 3.3 25 57-81 39-71 (84)
15 2Q03_B Uncharacterized protein 26.9 2.6E+02 0.0031 19.4 4.0 26 40-65 62-87 (138)
16 6EU8_A Putative heme binding p 24.1 3.7E+02 0.0043 19.7 4.5 32 32-64 156-189 (196)
17 PF12915.11 ; DUF3833 ; Protein 22.3 4.7E+02 0.0054 18.7 6.1 44 35-78 34-78 (160)
18 PF05800.15 ; GvpO ; Gas vesicl 22.0 1.8E+02 0.0021 19.2 2.4 14 60-73 67-80 (94)
19 4GBS_A Putative lipoprotein; P 21.1 4.8E+02 0.0055 19.0 4.5 32 32-64 159-192 (200)
20 3U22_A putative HmuY_like heme 21.1 4.8E+02 0.0056 19.1 4.6 32 32-64 161-194 (202)
21 4LO6_A HA-70; progenitor toxin 20.1 1.7E+02 0.002 22.5 2.2 16 61-76 128-143 (190)
No 1
>PF11197.12 ; DUF2835 ; Protein of unknown function (DUF2835)
Probab=85.29 E-value=3.4 Score=26.09 Aligned_cols=41 Identities=22% Similarity=0.473 Sum_probs=0.0 Template_Neff=5.700
Q ss_pred HHHhCeEEEEeCCCceeEEEEEEecEE-------CCcccEEEEEECCCCCE
Q FD01848386_044 29 FQDAGTVTKITGGDGIVRDMLKIPGRY-------RGKNGNFEFIKEPDGSI 72 (81)
Q Consensus 29 ~~~~g~~~~~~ggDG~~~~~~qi~G~~-------nG~~G~FE~Iv~~~G~i 72 (81)
|....+....+..||. .||.|.+. +|..|.||+..|.+|..
T Consensus 18 Y~G~~~~V~v~~~~G~---~v~fPa~~lr~fvt~~GI~G~F~l~~d~~~kf 65 (71)
T I3Y5V6_THIV6/2 18 YRGAAARVVVRAQDGR---SLSLPASNLRRFVAADGVRGRFRLTVDDDNRM 65 (71)
T ss_pred hCCCCcEEEEEeCCCC---EEEEeHHHeeecEeccceeEEEEEEECCCCCE
No 2
>PF08968.14 ; DUF1885 ; Domain of unknown function (DUF1885)
Probab=70.30 E-value=3.9 Score=29.49 Aligned_cols=43 Identities=19% Similarity=0.251 Sum_probs=0.0 Template_Neff=4.000
Q ss_pred CHHHHHhccCCCC-C-CCcHHHHhHH-HhCeEEEEeCCCceeEEEEEE
Q FD01848386_044 7 TDKVIAQMKSGDL-H-SFPESVRTFQ-DAGTVTKITGGDGIVRDMLKI 51 (81)
Q Consensus 7 ~~rv~~~~k~~D~-H-~fp~~vd~~~-~~g~~~~~~ggDG~~~~~~qi 51 (81)
+.+++.||.+ |. . +||+.+..-. ..+..+.++|.|-. |..+-+
T Consensus 32 t~KTG~QL~W-~Y~~aAFPY~Iee~~e~~~~~l~Lkg~~~~-Y~~i~i 77 (140)
T U5L8K2_9BACI/3 32 TAKTGDQVDW-GYSKAAFPYEIKEYTQGDGKRLWLQSLDDR-YNTILI 77 (140)
T ss_pred HHHHHhhcCC-cchhCCCCEEEEEeeCCCceEEEEEeCCCC-CcEEEE
No 3
>1T6A_A RBSTP2229 gene product; structural genomics, hypothetical protein, Bacillus stearothermophilus, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG; HET: MSE; 2.05A {Geobacillus stearothermophilus} SCOP: d.129.8.1
Probab=68.82 E-value=5 Score=28.49 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=0.0 Template_Neff=3.700
Q ss_pred CHHHHHhccCCCC--CCCcHHHHhHHHhCeEEEEeCCCceeEEEEEE
Q FD01848386_044 7 TDKVIAQMKSGDL--HSFPESVRTFQDAGTVTKITGGDGIVRDMLKI 51 (81)
Q Consensus 7 ~~rv~~~~k~~D~--H~fp~~vd~~~~~g~~~~~~ggDG~~~~~~qi 51 (81)
+.++++||.+ |. ++||+.+.. ..+. +.++|.|-. |..+-+
T Consensus 30 t~kTG~QL~W-~Y~~aAFPY~Iee--~e~~-l~Lkg~~~~-Y~~i~i 71 (126)
T 1T6A_A 30 LKKTGEQLGW-AYEQAAFPYTVRI--HESV-LYLQGDGRL-YKGMAI 71 (126)
T ss_dssp HHHHHHHHHH-HHHHHHCCEEEEE--ETTE-EEEEESSTT-CCEEEE
T ss_pred HHHHHhhhCC-ChhhccCCEEEEe--eCCE-EEEEeCCCC-CCEEEE
No 4
>PF07753.15 ; DUF1609 ; Protein of unknown function (DUF1609)
Probab=64.55 E-value=12 Score=28.99 Aligned_cols=73 Identities=11% Similarity=0.165 Sum_probs=0.0 Template_Neff=4.200
Q ss_pred ccCHHHHHhccCCCC-CCCcHHHHhHH-HhCeEEEEeCCCc----------eeEEEEEEecEECCcccEEEEEEC-----
Q FD01848386_044 5 KYTDKVIAQMKSGDL-HSFPESVRTFQ-DAGTVTKITGGDG----------IVRDMLKIPGRYRGKNGNFEFIKE----- 67 (81)
Q Consensus 5 ~y~~rv~~~~k~~D~-H~fp~~vd~~~-~~g~~~~~~ggDG----------~~~~~~qi~G~~nG~~G~FE~Iv~----- 67 (81)
+|..+....++.+=. |.-+.++.-+. .....|-+..++. .....|+..|. =+.|+.|+.++
T Consensus 60 kyk~~s~eeI~eQK~~HDi~gV~~LL~~~d~d~fF~~t~~y~k~~~~R~~~~Ai~~Le~~g~--~~~GiVEIGi~k~~~~ 137 (225)
T Y208_ENCCU/353 60 RWRGRSLEEIKEQKVFHDIVGVLELLKSPDADRFFMDTGKYTKGGSERQRMVAIGVLERGEK--KMTGVVEVGMFKDSPS 137 (225)
T ss_pred ccCCCCHHHHHHHHHhhchHHHHHHhcCcChhhcceecCcccCCCcceeeEEEEEEEEECCE--EEEEEEEEEeecCCCC
Q ss_pred CCCCEEEEEeCC
Q FD01848386_044 68 PDGSINHRLFKP 79 (81)
Q Consensus 68 ~~G~itHR~F~p 79 (81)
+...|.|.+|+|
T Consensus 138 ~~~vIYHlMFr~ 149 (225)
T Y208_ENCCU/353 138 GCPVVYHLMFRV 149 (225)
T ss_pred CCceEEEEeeEe
No 5
>8B61_A Conserved hypothetical lipoprotein; HMUY like, heme binding, UNKNOWN FUNCTION; HET: P7W, GOL; 1.81A {Bacteroides fragilis NCTC 9343}
Probab=63.80 E-value=35 Score=25.61 Aligned_cols=33 Identities=15% Similarity=0.233 Sum_probs=0.0 Template_Neff=7.700
Q ss_pred hCeEEEEeCCCceeEEEEEEecEECCc------ccEEEE
Q FD01848386_044 32 AGTVTKITGGDGIVRDMLKIPGRYRGK------NGNFEF 64 (81)
Q Consensus 32 ~g~~~~~~ggDG~~~~~~qi~G~~nG~------~G~FE~ 64 (81)
...+|.++..||..+.++|+.+.+++. .|.+.+
T Consensus 193 ~~~vyiirtadG~~y~Klqi~~yy~~~~~~~~~~g~~tf 231 (238)
T 8B61_A 193 SYHTYVVRTADGKHYFKIQIISWYDANVEIGDEGGRLSY 231 (238)
T ss_dssp CCEEEEEECTTSSCEEEEEEEEC-----------CCCEE
T ss_pred CCcEEEEEeCCCCEEEEEEEEEEEcCCCcccCCceeEEE
No 6
>5I4Q_A Contact-dependent inhibitor A; toxin, antitoxin, elongation factor, Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, Structure-Function Analysis of; HET: MSE; 2.35A {Escherichia coli}
Probab=53.83 E-value=88 Score=19.95 Aligned_cols=69 Identities=19% Similarity=0.311 Sum_probs=0.0 Template_Neff=7.800
Q ss_pred CCcccCHHHHHhccCCCC-CCCc-HHHHhHHHhCeEEEE-eCCCceeEEEEEEecEECCcccEEEEEECC-CCCEEEEEe
Q FD01848386_044 2 ANTKYTDKVIAQMKSGDL-HSFP-ESVRTFQDAGTVTKI-TGGDGIVRDMLKIPGRYRGKNGNFEFIKEP-DGSINHRLF 77 (81)
Q Consensus 2 ~~~~y~~rv~~~~k~~D~-H~fp-~~vd~~~~~g~~~~~-~ggDG~~~~~~qi~G~~nG~~G~FE~Iv~~-~G~itHR~F 77 (81)
+.+++++.+.+.| .|+ ...| ......++.|.. + ..+.|. +|.+.-.....|++.++ +++|.|-.+
T Consensus 20 ~~lkfs~~~~~~m--~~~~R~vP~~il~~~i~~g~~--~~~dp~g~-------~g~~~y~~~~lev~~~~~~~ti~h~~~ 88 (92)
T 5I4Q_A 20 DGMKFSKSYYEKL--WEQGRPAPFVQAREVLNSNPK--IEPDPRGA-------PGYLRYEGAGLEMIYNPKTGQVGHIQP 88 (92)
T ss_dssp TTEEEEHHHHHHH--HHTTCCCHHHHHHHHHTSCCE--EEECTTCC-------TTCEEEEETTEEEEEETTTTEEEEEEE
T ss_pred cCCcccHHHHHHH--HhCCCCChHHHHHHHHhcCCC--CCCCCCCC-------CceeeeecCeeEEEEeCCCCeEEEeee
Q ss_pred CCCC
Q FD01848386_044 78 KPDS 81 (81)
Q Consensus 78 ~p~g 81 (81)
.+.+
T Consensus 89 ~~~~ 92 (92)
T 5I4Q_A 89 VKVK 92 (92)
T ss_dssp CCCC
T ss_pred ccCC
No 7
>6R2H_B HmuY protein; Porphyromonas gingivalis, Prevotella intermedia, HmuY, heme, hemophore, heme-binding protein, phylogeny, sequence evolution, METAL BINDING PROTEIN; HET: GOL; 2.46A {Prevotella intermedia}
Probab=50.68 E-value=74 Score=23.56 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=0.0 Template_Neff=6.900
Q ss_pred hCeEEEEeCCCceeEEEEEEecEEC--CcccEEEE
Q FD01848386_044 32 AGTVTKITGGDGIVRDMLKIPGRYR--GKNGNFEF 64 (81)
Q Consensus 32 ~g~~~~~~ggDG~~~~~~qi~G~~n--G~~G~FE~ 64 (81)
.+.+|.++.+||. +.++|+...++ |..|.+.+
T Consensus 152 ~~~vyiik~~dG~-~~Kl~~~~yy~~~g~~G~~tf 185 (194)
T 6R2H_B 152 MGNVFAVKFKNGN-AALIKFKDNLDKTGKKKAVSF 185 (194)
T ss_dssp CCCEEEEEETTSC-EEEEEEEEEECTTSCSEEEEE
T ss_pred cCcEEEEEeCCCC-EEEEEEEEeecCCCCcceEEE
No 8
>PF08884.15 ; Flagellin_D3 ; Flagellin D3 domain
Probab=41.77 E-value=1.3e+02 Score=20.82 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=0.0 Template_Neff=3.600
Q ss_pred EEeCCCceeEEEEEEecEECCcccEEEEEECC-CCCEE
Q FD01848386_044 37 KITGGDGIVRDMLKIPGRYRGKNGNFEFIKEP-DGSIN 73 (81)
Q Consensus 37 ~~~ggDG~~~~~~qi~G~~nG~~G~FE~Iv~~-~G~it 73 (81)
.+.-.||..|..+ .+++|.||.=++. +|.++
T Consensus 46 ~v~~ddGkYYv~V------t~~~GyYev~Vd~~~G~Vt 77 (98)
T Q17ZS2_ECOLX/1 46 KLVEKDGKYYVND------TTNSKYYDAEVDTSKGEIN 77 (98)
T ss_pred EEEEcCCcEEEEE------cCCCceEEEEEeCCCCeEE
No 9
>PF14064.10 ; HmuY ; HmuY protein
Probab=40.41 E-value=1.5e+02 Score=20.25 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=0.0 Template_Neff=8.700
Q ss_pred CeEEEEeCCCceeEEEEEEecEEC--CcccEEEE
Q FD01848386_044 33 GTVTKITGGDGIVRDMLKIPGRYR--GKNGNFEF 64 (81)
Q Consensus 33 g~~~~~~ggDG~~~~~~qi~G~~n--G~~G~FE~ 64 (81)
..+|.++..||..+.++|+...++ |..|.+.+
T Consensus 116 ~~~yvir~~~G~~~~Kl~~~~yy~~~~~~g~~t~ 149 (151)
T Q8EXL6_LEPIN/7 116 YKVFVIRSNTGNEYYLFQITGYYNSEGTSAHPTI 149 (151)
T ss_pred CeEEEEEcCCCCcEEEEEEEEEECCCCCccceEE
No 10
>6EWM_F Haemophore HmuY; heme-binding protein, CELL INVASION; HET: SO4, GOL, MES; 1.4A {Porphyromonas gingivalis}
Probab=38.96 E-value=1.6e+02 Score=21.05 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=0.0 Template_Neff=8.600
Q ss_pred hCeEEEEeCCCceeEEEEEEecEEC--CcccEEEE
Q FD01848386_044 32 AGTVTKITGGDGIVRDMLKIPGRYR--GKNGNFEF 64 (81)
Q Consensus 32 ~g~~~~~~ggDG~~~~~~qi~G~~n--G~~G~FE~ 64 (81)
...+|.++..||. +.++|+...++ |..|.+.+
T Consensus 151 ~~~vyiir~~~G~-y~Kl~~~~~~~~~~~~g~~tf 184 (191)
T 6EWM_F 151 SKRVFFVRGADGN-IAKVQFTDYQDAELKKGVITF 184 (191)
T ss_dssp CCCCEEEECTTSC-EEEEEEEEEECTTCCEEEEEE
T ss_pred cCcEEEEEeCCCC-EEEEEEEEEEeCCCcceEEEE
No 11
>PF11528.12 ; DUF3224 ; Protein of unknown function (DUF3224)
Probab=36.35 E-value=1.5e+02 Score=20.30 Aligned_cols=26 Identities=23% Similarity=0.567 Sum_probs=0.0 Template_Neff=7.400
Q ss_pred CCCceeEEEEEEecEECCcccEEEEE
Q FD01848386_044 40 GGDGIVRDMLKIPGRYRGKNGNFEFI 65 (81)
Q Consensus 40 ggDG~~~~~~qi~G~~nG~~G~FE~I 65 (81)
.+.....-+..+.|+++|++|.|-+.
T Consensus 53 ~g~~~~~G~~~f~G~i~Gr~Gtfvl~ 78 (128)
T D7BY08_STRBB/5 53 DKTGVCAGYELVTGTLGGRTGSFVFV 78 (128)
T ss_pred CCceEEEEEEEEEEEECCeEEEEEEE
No 12
>2OOJ_A Hypothetical protein; STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION; HET: MSE; 1.84A {Shewanella oneidensis} SCOP: b.159.2.1
Probab=29.38 E-value=2.2e+02 Score=19.84 Aligned_cols=26 Identities=19% Similarity=0.397 Sum_probs=0.0 Template_Neff=7.500
Q ss_pred CCCceeEEEEEEecEECCcccEEEEE
Q FD01848386_044 40 GGDGIVRDMLKIPGRYRGKNGNFEFI 65 (81)
Q Consensus 40 ggDG~~~~~~qi~G~~nG~~G~FE~I 65 (81)
.+.....-+....|+++|++|.|-+.
T Consensus 59 ~g~~~f~g~e~f~G~i~Gr~Gtfv~~ 84 (141)
T 2OOJ_A 59 KGSAGYVAIEQVVGKLCGRQGSFVLQ 84 (141)
T ss_dssp TTCEEEEEEEEEEEEETTEEEEEEEE
T ss_pred CCeEEEEEEEEEEEEECCEEEEEEEE
No 13
>PF18356.5 ; DUF5608 ; Domain of unknown function (DUF5608)
Probab=29.03 E-value=2.3e+02 Score=17.38 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=0.0 Template_Neff=1.000
Q ss_pred CCceeEEEEEEecEECC---cccEEEEEECCCCCEE
Q FD01848386_044 41 GDGIVRDMLKIPGRYRG---KNGNFEFIKEPDGSIN 73 (81)
Q Consensus 41 gDG~~~~~~qi~G~~nG---~~G~FE~Iv~~~G~it 73 (81)
+.|+-.+.+-..|...| .-|+||.+++-.|.|.
T Consensus 7 pkgigvtvylangrvqgrlidigvyevlvevggdii 42 (56)
T Q6ZYJ4_PSVY/81 7 PKGIGVTVYLANGRVQGRLIDIGVYEVLVEVGGDII 42 (56)
T ss_pred CCcceeEEEEeCCeEeceEEeeeccEEeeEeCCeEE
No 14
>PF10262.13 ; Rdx ; Rdx family
Probab=27.46 E-value=2.2e+02 Score=17.24 Aligned_cols=25 Identities=8% Similarity=0.052 Sum_probs=0.0 Template_Neff=9.000
Q ss_pred CcccEEEEEECCCCC--------EEEEEeCCCC
Q FD01848386_044 57 GKNGNFEFIKEPDGS--------INHRLFKPDS 81 (81)
Q Consensus 57 G~~G~FE~Iv~~~G~--------itHR~F~p~g 81 (81)
+..|.||+.++.++. +.|..-.-++
T Consensus 39 ~~~G~FeV~v~~~~~~~~~~~~~~i~sk~~~g~ 71 (84)
T C7YNM0_FUSV7/1 39 STGGTFIVSITHQAPEAETASTKVLWDRREDGG 71 (84)
T ss_pred CCCCeEEEEECCCCCcccCCceeEEEeccccCC
No 15
>2Q03_B Uncharacterized protein; YP_563039.1, uncharacterized protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, UNKNOWN; HET: MSE, GOL; 1.8A {Shewanella denitrificans OS217} SCOP: b.159.2.1
Probab=26.86 E-value=2.6e+02 Score=19.41 Aligned_cols=26 Identities=15% Similarity=0.298 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred CCCceeEEEEEEecEECCcccEEEEE
Q FD01848386_044 40 GGDGIVRDMLKIPGRYRGKNGNFEFI 65 (81)
Q Consensus 40 ggDG~~~~~~qi~G~~nG~~G~FE~I 65 (81)
.+.....-.....|+++|++|.|-+.
T Consensus 62 ~g~~~f~G~~~f~Gti~Gr~Gtfv~~ 87 (138)
T 2Q03_B 62 NANATFVGFEHFTGSLGDKKGSFILQ 87 (138)
T ss_dssp TTEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCeEEEEEEEEEEEeCCeEEEEEEE
No 16
>6EU8_A Putative heme binding protein; heme-binding protein; 1.47A {Tannerella forsythia}
Probab=24.07 E-value=3.7e+02 Score=19.73 Aligned_cols=32 Identities=19% Similarity=0.287 Sum_probs=0.0 Template_Neff=7.600
Q ss_pred hCeEEEEeCCCceeEEEEEEecEE--CCcccEEEE
Q FD01848386_044 32 AGTVTKITGGDGIVRDMLKIPGRY--RGKNGNFEF 64 (81)
Q Consensus 32 ~g~~~~~~ggDG~~~~~~qi~G~~--nG~~G~FE~ 64 (81)
...+|.++..||. +.++|+...+ .|..|.+.+
T Consensus 156 ~~~vyivr~~dG~-y~Klq~~~y~~~~~~~g~~tf 189 (196)
T 6EU8_A 156 SKSVFVVKFKDGS-YAKIKFTDATNDKQEKGHVSF 189 (196)
T ss_dssp CCCCEEEECTTSC-EEEEEEEEEECTTCCEEEEEE
T ss_pred CCcEEEEEeCCCC-EEEEEEEEeecCCCcceEEEE
No 17
>PF12915.11 ; DUF3833 ; Protein of unknown function (DUF3833)
Probab=22.31 E-value=4.7e+02 Score=18.74 Aligned_cols=44 Identities=16% Similarity=0.011 Sum_probs=0.0 Template_Neff=7.200
Q ss_pred EEEEeCCCceeEEEEEEecEECCcccEE-EEEECCCCCEEEEEeC
Q FD01848386_044 35 VTKITGGDGIVRDMLKIPGRYRGKNGNF-EFIKEPDGSINHRLFK 78 (81)
Q Consensus 35 ~~~~~ggDG~~~~~~qi~G~~nG~~G~F-E~Iv~~~G~itHR~F~ 78 (81)
++...-+.-..+-.+.+.|+..|..++. |-+.-.||...+|.|.
T Consensus 34 ~~~~~~g~~~r~f~v~~~G~~~~~~l~L~E~~~~~dG~~~~R~W~ 78 (160)
T E8RQB2_ASTEC/2 34 VFEDRSGKVSRTFSVVTRGTPTADGFVLDERFLWNDGERQTRTWT 78 (160)
T ss_pred EEECCCCCeEEEEEEEEEEEEcCCEEEEEEEEEeCCCCeEEEEEE
No 18
>PF05800.15 ; GvpO ; Gas vesicle synthesis protein GvpO
Probab=22.02 E-value=1.8e+02 Score=19.24 Aligned_cols=14 Identities=14% Similarity=0.532 Sum_probs=0.0 Template_Neff=6.200
Q ss_pred cEEEEEECCCCCEE
Q FD01848386_044 60 GNFEFIKEPDGSIN 73 (81)
Q Consensus 60 G~FE~Iv~~~G~it 73 (81)
|+||...|.+|.+.
T Consensus 67 ~~YeV~ld~~gev~ 80 (94)
T C9ZET7_STRSW/4 67 ASYRVELDPRGELT 80 (94)
T ss_pred eEEEEEECCCCCEE
No 19
>4GBS_A Putative lipoprotein; PF14064 family, transport, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, HEME-BINDING; HET: MLY, MSE, SO4; 2.48A {Bacteroides fragilis}
Probab=21.13 E-value=4.8e+02 Score=18.99 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=0.0 Template_Neff=8.200
Q ss_pred hCeEEEEeCCCceeEEEEEEecEEC--CcccEEEE
Q FD01848386_044 32 AGTVTKITGGDGIVRDMLKIPGRYR--GKNGNFEF 64 (81)
Q Consensus 32 ~g~~~~~~ggDG~~~~~~qi~G~~n--G~~G~FE~ 64 (81)
...+|-++..||. +.++|+...++ |..|.+.+
T Consensus 159 ~~~vyvvr~~~G~-y~Kl~~~~~~~~~g~~g~~tf 192 (200)
T 4GBS_A 159 SNKVYLLRMKDDT-MAAIRLVSYMNAAGIKGYMTF 192 (200)
T ss_dssp CCCCEEEECTTSC-EEEEEEEEEECTTCCEEEEEE
T ss_pred CCcEEEEEeCCCC-EEEEEEEEEEcCCCcceEEEE
No 20
>3U22_A putative HmuY_like heme binding protein; transport, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, HEME-BINDING PROTEIN, HEME; HET: GOL, SO4, UNL, MSE; 2.12A {Bacteroides vulgatus}
Probab=21.07 E-value=4.8e+02 Score=19.09 Aligned_cols=32 Identities=16% Similarity=0.269 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred hCeEEEEeCCCceeEEEEEEecEEC--CcccEEEE
Q FD01848386_044 32 AGTVTKITGGDGIVRDMLKIPGRYR--GKNGNFEF 64 (81)
Q Consensus 32 ~g~~~~~~ggDG~~~~~~qi~G~~n--G~~G~FE~ 64 (81)
...+|-++..|| .+.++|+...++ |..|.+.+
T Consensus 161 ~~~vyvVr~~dG-~y~Kl~~~~y~~~~g~~g~~tf 194 (202)
T 3U22_A 161 SNKVYMVKLKDG-TYAAVRLTNYMNASGVKGFMTI 194 (202)
T ss_dssp CCCCEEEECTTS-CEEEEEEEEEECTTCCEEEEEE
T ss_pred CCeEEEEEeCCC-CEEEEEEEEeEcCCCCeeEEEE
No 21
>4LO6_A HA-70; progenitor toxin complex, botulinum neurotoxin, botulism, neurotoxin associated protein, hemagglutinin, carbohydrate/sugar binding, secreted protein, PROTEIN TRANSPORT; HET: GAL, SIA; 2.3A {Clostridium botulinum}
Probab=20.12 E-value=1.7e+02 Score=22.47 Aligned_cols=16 Identities=31% Similarity=0.372 Sum_probs=0.0 Template_Neff=3.500
Q ss_pred EEEEEECCCCCEEEEE
Q FD01848386_044 61 NFEFIKEPDGSINHRL 76 (81)
Q Consensus 61 ~FE~Iv~~~G~itHR~ 76 (81)
+||+|+-.+|+|+|+.
T Consensus 128 RYdvI~V~ng~Ii~~A 143 (190)
T 4LO6_A 128 RYEIIKVLQHEIIERA 143 (190)
T ss_pred eeEEEEEeCCeEEEeE