Query FD01847549_02012 hypothetical protein
Match_columns 100
No_of_seqs 107 out of 203
Neff 4.50158
Searched_HMMs 86581
Date Tue Feb 27 21:01:50 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/2560567.hhr -oa3m ../results/2560567.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF15607.10 ; Ntox44 ; Bacteria 99.9 5.6E-24 6.5E-29 139.4 5.0 82 10-99 1-107 (107)
2 PF01730.20 ; UreF ; UreF 29.5 1.9E+02 0.0022 20.5 3.8 26 38-63 101-126 (149)
3 7AM2_BF mL99; RIBOSOME, Mitoch 28.8 1.3E+02 0.0016 22.7 2.9 32 18-50 13-44 (109)
4 6YXY_Bg mL99; mitoribosome, as 25.6 1.6E+02 0.0018 22.2 2.8 31 19-50 10-40 (105)
5 PF11372.12 ; DUF3173 ; Domain 22.5 39 0.00045 22.3 -0.7 14 87-100 27-40 (58)
No 1
>PF15607.10 ; Ntox44 ; Bacterial toxin 44
Probab=99.90 E-value=5.6e-24 Score=139.42 Aligned_cols=82 Identities=33% Similarity=0.507 Sum_probs=72.9 Template_Neff=9.700
Q ss_pred HHHHHhhcCCCCCccccCh-------------------------hhccccccchhHHHHHcCCCHHHHHHHHHHHHHHhC
Q FD01847549_020 10 WFYQMVRNHGPWDYKQGHP-------------------------QYANFGNFHYGAIGAAAGIPDGVLLRGAGAAQILAG 64 (100)
Q Consensus 10 wF~~~Vk~gG~WDyK~~G~-------------------------~yedfGNfhYG~vg~A~G~pe~~llr~AG~aQ~~~g 64 (100)
||+++|+++|+||+|.... .++++||+|||+||+++|||+.+|+.+||++|..++
T Consensus 1 ~~~~~v~~~g~WD~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gNi~yGy~g~a~G~~~~~l~~gag~~q~~~~ 80 (107)
T H6L0H2_SAPGL/4 1 NFANLVTDNAPFDLKSTSRSNLDKIPSYAAIVIGEWSMLNGRLTRYDDYGNISYGYWGRAYGYTTKTLLRGSNDNQIKKD 80 (107)
T ss_pred ChHHHhcCCCCCCCCchhhhhccCCcccccccccccceeCCceeeHhhhcccchhHHhHHcCCCHHHHHhhcCcccccCC
Confidence 6899999999999997511 357899999999999999999999999999999988
Q ss_pred CCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHc
Q FD01847549_020 65 TSNPVEFAQYHAVDAYGDDPVDQSWIKAGIDYARR 99 (100)
Q Consensus 65 ts~~~~~~~~~g~~pygDDP~DQ~~I~~Gi~yy~~ 99 (100)
+... .+ +++|||.|+.+|+.||++|++
T Consensus 81 ~~~~-~~-------~~~d~~~D~~~i~~G~~~~~~ 107 (107)
T H6L0H2_SAPGL/4 81 ESGQ-TD-------GNGDEQRDIDAIKMGIKQYDN 107 (107)
T ss_pred CCCC-CC-------CCCCCHHHHHHHHHHHHHHhC
Confidence 7655 33 799999999999999999975
No 2
>PF01730.20 ; UreF ; UreF
Probab=29.54 E-value=1.9e+02 Score=20.55 Aligned_cols=26 Identities=12% Similarity=-0.047 Sum_probs=0.0 Template_Neff=9.300
Q ss_pred hhHHHHHcCCCHHHHHHHHHHHHHHh
Q FD01847549_020 38 YGAIGAAAGIPDGVLLRGAGAAQILA 63 (100)
Q Consensus 38 YG~vg~A~G~pe~~llr~AG~aQ~~~ 63 (100)
||+++..+|+|.+..+.+-.+....+
T Consensus 101 ~g~~~~~~~i~~~~a~~~~l~~~~~~ 126 (149)
T UREF2_BRUA2/52 101 LGLAFAALDVDGRDAFGAQQYGVATT 126 (149)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHH
No 3
>7AM2_BF mL99; RIBOSOME, Mitochondria, Kinetoplastid; HET: ATP, GTP; 3.4A {Leishmania tarentolae}
Probab=28.84 E-value=1.3e+02 Score=22.72 Aligned_cols=32 Identities=19% Similarity=0.341 Sum_probs=0.0 Template_Neff=2.400
Q ss_pred CCCCCccccChhhccccccchhHHHHHcCCCHH
Q FD01847549_020 18 HGPWDYKQGHPQYANFGNFHYGAIGAAAGIPDG 50 (100)
Q Consensus 18 gG~WDyK~~G~~yedfGNfhYG~vg~A~G~pe~ 50 (100)
.+.|.=|..+ +++..|-||+=-++++++++++
T Consensus 13 e~~w~~k~~~-~~Dr~GrfnldEAAa~L~Ld~~ 44 (109)
T 7AM2_BF 13 ERGWKDKTVH-PLDRRGRFNLDEAAAELQLDEA 44 (109)
T ss_pred ccCCCCCcCC-CCCCCCcccHHHHHHHcCCCHH
No 4
>6YXY_Bg mL99; mitoribosome, assembly, LSU, RIBOSOME; HET: ATP, SPD, MG, PM8, NAD, GTP; 3.1A {Trypanosoma brucei brucei}
Probab=25.58 E-value=1.6e+02 Score=22.24 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=0.0 Template_Neff=2.300
Q ss_pred CCCCccccChhhccccccchhHHHHHcCCCHH
Q FD01847549_020 19 GPWDYKQGHPQYANFGNFHYGAIGAAAGIPDG 50 (100)
Q Consensus 19 G~WDyK~~G~~yedfGNfhYG~vg~A~G~pe~ 50 (100)
++|.=|..+ +++..|-||+--++++++++++
T Consensus 10 ~~w~~k~~~-~~Dr~GrfnldEAAa~L~Ld~~ 40 (105)
T 6YXY_Bg 10 SSWRDYPLG-SRDRRGRFNMDEAAAALQLNPA 40 (105)
T ss_pred ccccCCCCC-CCCCCCcccHHHHHHHcCCCHH
No 5
>PF11372.12 ; DUF3173 ; Domain of unknown function (DUF3173)
Probab=22.52 E-value=39 Score=22.32 Aligned_cols=14 Identities=14% Similarity=0.349 Sum_probs=0.0 Template_Neff=5.100
Q ss_pred HHHHHHHHHHHHcC
Q FD01847549_020 87 QSWIKAGIDYARRS 100 (100)
Q Consensus 87 Q~~I~~Gi~yy~~~ 100 (100)
+.|+++|+.+|+++
T Consensus 27 ~~lV~~G~~~Y~nk 40 (58)
T Q8DX67_STRA5/4 27 NLMVERGYTFYDRK 40 (58)
T ss_pred HHHHHcCCCcccCC