Query FD01845954_00561 hypothetical protein
Match_columns 88
No_of_seqs 115 out of 242
Neff 5.6316
Searched_HMMs 86581
Date Tue Feb 27 20:58:13 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/1023231.hhr -oa3m ../results/1023231.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF15607.10 ; Ntox44 ; Bacteria 99.9 2.4E-21 2.8E-26 123.5 6.3 85 2-86 2-107 (107)
2 6IGZ_M Photosystem I reaction 52.0 18 0.00021 20.2 1.2 11 76-86 22-32 (32)
3 7DR1_M Photosystem I reaction 52.0 20 0.00024 19.9 1.4 11 76-86 21-31 (31)
4 PF07465.17 ; PsaM ; Photosyste 39.6 31 0.00036 18.9 0.9 10 76-85 20-29 (29)
5 7Y5E_M2 Photosystem I reaction 39.5 29 0.00033 19.2 0.8 10 76-85 21-30 (30)
6 7Y7B_M Photosystem I reaction 39.3 33 0.00038 19.0 1.0 10 76-85 21-30 (30)
7 7COY_bM Photosystem I protein 38.5 33 0.00038 19.1 0.9 10 76-85 22-31 (31)
8 6K61_m Photosystem I reaction 38.4 34 0.00039 19.2 0.9 10 76-85 23-32 (32)
9 7YCA_M Photosystem I reaction 38.3 33 0.00038 19.1 0.9 10 76-85 22-31 (31)
10 6ZZY_M Photosystem I reaction 38.1 35 0.0004 19.0 0.9 10 76-85 22-31 (31)
11 6L4U_M Photosystem I reaction 37.1 36 0.00041 18.8 0.9 10 76-85 21-30 (30)
12 7XQP_M Photosystem I reaction 35.2 40 0.00046 18.9 0.9 10 76-85 23-32 (32)
13 8T0P_A Inner kinetochore subun 34.7 39 0.00046 25.3 1.1 13 8-20 3-15 (152)
14 6KMW_aM Photosystem I reaction 33.6 45 0.00052 18.6 0.9 10 76-85 22-31 (31)
15 6KMX_cM Photosystem I reaction 33.6 45 0.00052 18.6 0.9 10 76-85 22-31 (31)
16 7S3D_M PsaM; Photosystem I, Fa 33.5 46 0.00053 18.5 0.9 10 76-85 22-31 (31)
17 2K19_A Putative piscicolin 126 30.6 31 0.00036 23.6 -0.0 7 39-45 92-98 (98)
18 7Y3F_M PsaM; Photosystem I, EL 28.3 62 0.00071 19.2 0.9 10 76-85 31-40 (40)
19 PF10777.13 ; YlaC ; Inner memb 25.3 61 0.00071 24.4 0.7 29 5-39 121-149 (154)
20 6A7F_c major coat protein p8; 25.0 84 0.00097 19.4 1.2 9 79-87 40-48 (53)
21 8B3Q_EnE Capsid protein G8P; V 23.5 94 0.0011 18.9 1.2 9 79-87 37-45 (50)
22 PF19857.3 ; DUF6332 ; Family o 21.6 1.6E+02 0.0018 20.1 2.0 12 73-84 8-19 (85)
23 PF08038.16 ; Tom7 ; TOM7 famil 20.8 59 0.00068 18.6 -0.1 6 41-46 14-19 (40)
No 1
>PF15607.10 ; Ntox44 ; Bacterial toxin 44
Probab=99.85 E-value=2.4e-21 Score=123.47 Aligned_cols=85 Identities=19% Similarity=0.231 Sum_probs=69.9 Template_Neff=9.700
Q ss_pred ccc--CCCCCCCChHHHHHHhccccc---c------CCCCeEEEeeccccCeeehHHHhcCCCHHHHHHHhcCC------
Q FD01845954_005 2 WGD--TKISIYDFKEPIRQHYGAMLR---I------GNDAKIYSNEGFSNLDWGILSYQVGIGPDNAKMFANMD------ 64 (88)
Q Consensus 2 W~~--~~g~~WDhK~~i~~~~g~~~~---~------~~~~~~~~yDvwSNIHYGYVG~aaGf~~~~L~~GA~~~------ 64 (88)
|.+ .++++||+|+.+...++.... + ......+.||+|+||||||||+++||++.+|+.||+++
T Consensus 2 ~~~~v~~~g~WD~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gNi~yGy~g~a~G~~~~~l~~gag~~q~~~~~ 81 (107)
T H6L0H2_SAPGL/4 2 FANLVTDNAPFDLKSTSRSNLDKIPSYAAIVIGEWSMLNGRLTRYDDYGNISYGYWGRAYGYTTKTLLRGSNDNQIKKDE 81 (107)
T ss_pred hHHHhcCCCCCCCCchhhhhccCCcccccccccccceeCCceeeHhhhcccchhHHhHHcCCCHHHHHhhcCcccccCCC
Confidence 555 789999999999887653211 0 11334788999999999999999999999999999987
Q ss_pred ----cccCCCHHHHHHHHHHHHHHHh
Q FD01845954_005 65 ----PSSRDEIQDDIATDEGYKLAIN 86 (88)
Q Consensus 65 ----~~~~ddp~D~~ai~iGi~L~~~ 86 (88)
....|||.|+.+|++|++||++
T Consensus 82 ~~~~~~~~d~~~D~~~i~~G~~~~~~ 107 (107)
T H6L0H2_SAPGL/4 82 SGQTDGNGDEQRDIDAIKMGIKQYDN 107 (107)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 1278999999999999999975
No 2
>6IGZ_M Photosystem I reaction center subunit XII; PSI-LHCI, PLANT PROTEIN; HET: XAT, DGD, CHL, 8CT, HTG, PQN, LMG, LHG, SF4, CLA;{Bryopsis corticulans}
Probab=52.04 E-value=18 Score=20.23 Aligned_cols=11 Identities=27% Similarity=0.084 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred HHHHHHHHHHh
Q FD01845954_005 76 ATDEGYKLAIN 86 (88)
Q Consensus 76 ai~iGi~L~~~ 86 (88)
|+++|.+||++
T Consensus 22 A~rLg~~LYk~ 32 (32)
T 6IGZ_M 22 ALRLGSTLYNS 32 (32)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
No 3
>7DR1_M Photosystem I reaction center subunit XII; Photosystem I, ELECTRON TRANSPORT, PHOTOSYNTHESIS; HET: CL0, PQN, LHG, CLA, SF4, LMG, BCR; 3.2A {Cyanophora paradoxa}
Probab=51.97 E-value=20 Score=19.93 Aligned_cols=11 Identities=18% Similarity=-0.109 Sum_probs=0.0 Template_Neff=3.800
Q ss_pred HHHHHHHHHHh
Q FD01845954_005 76 ATDEGYKLAIN 86 (88)
Q Consensus 76 ai~iGi~L~~~ 86 (88)
|+++|.+||++
T Consensus 21 A~rLG~~Lyk~ 31 (31)
T 7DR1_M 21 ALRLALELYKF 31 (31)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhC
No 4
>PF07465.17 ; PsaM ; Photosystem I protein M (PsaM)
Probab=39.64 E-value=31 Score=18.90 Aligned_cols=10 Identities=30% Similarity=0.086 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 20 A~rLG~~LYk 29 (29)
T Q6YXK4_PHYPA/4 20 ALRLGKSLYQ 29 (29)
T ss_pred HHHHHHHHhC
No 5
>7Y5E_M2 Photosystem I reaction center subunit XII; complex, PHOTOSYNTHESIS; HET: BCT, BCR, LHG, DGD, OEX, ZEX, 3XQ, BGC, PL9, GOL, PHO, CYC, LMG, CLA, PQN, PEB, SF4, HEM, PUB, MEN; 3.3A {Porphyridium purpureum}
Probab=39.53 E-value=29 Score=19.21 Aligned_cols=10 Identities=30% Similarity=0.159 Sum_probs=0.0 Template_Neff=3.800
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 21 A~rLG~~LYk 30 (30)
T 7Y5E_M2 21 AIRLGTSLYT 30 (30)
T ss_pred HHHHHHHhcC
No 6
>7Y7B_M Photosystem I reaction center subunit XII; Cryptophyte, Photosystem I, evolution, PHOTOSYNTHESIS; HET: DGD, 8CT, LMU, KC2, II3, PQN, CLA, SF4, SQD, II0, LMG, LHG, IHT; 2.66A {Chroomonas placoidea}
Probab=39.32 E-value=33 Score=18.97 Aligned_cols=10 Identities=30% Similarity=0.099 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 21 A~rLG~~LYk 30 (30)
T 7Y7B_M 21 AIRLGTALYQ 30 (30)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
No 7
>7COY_bM Photosystem I protein PsaM; Photosynthesis, Photosystem I, Acaryochloris marina, Light-harvesting, Chlorophyll d; HET: LHG, CL7, G9R, PHO, LMG, PQN, SF4, UNL; 2.5A {Acaryochloris marina MBIC11017}
Probab=38.54 E-value=33 Score=19.09 Aligned_cols=10 Identities=30% Similarity=0.262 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 22 A~rLG~~LYk 31 (31)
T 7COY_bM 22 ALNLGSALSK 31 (31)
T ss_pred HHHHHHHHhC
No 8
>6K61_m Photosystem I reaction center subunit XII; Photosystem I, PSI, PCC7120, PHOTOSYNTHESIS; HET: BCR, LHG, SQD, LMG, PQN, CLA, SF4, CL0; 2.37A {Nostoc sp. PCC 7120}
Probab=38.44 E-value=34 Score=19.17 Aligned_cols=10 Identities=20% Similarity=-0.153 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 23 A~rLG~~LYk 32 (32)
T 6K61_m 23 AWRLATELYK 32 (32)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
No 9
>7YCA_M Photosystem I reaction center subunit XII; Complex, Electron transport, Photosynthesis; HET: XAT, DGD, NEX, CHL, IWJ, CL0, Q6L, KC2, PQN, CLA, SF4, SQD, LHG, LMG, BCR, TPO;{Ostreococcus tauri}
Probab=38.33 E-value=33 Score=19.10 Aligned_cols=10 Identities=20% Similarity=0.089 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 22 A~rLg~~LYk 31 (31)
T 7YCA_M 22 SLRLGTQLYK 31 (31)
T ss_pred HHHHHHHhhC
No 10
>6ZZY_M Photosystem I reaction center subunit XII; photosystem I, light stress, PHOTOSYNTHESIS; HET: CL0, DGD, PCW, LPX, SQD, PQN, SF4, 4RF, QTB, RRX, A8S, LHG, SPH, ECH, CLA, P5S, XAT, ERG, BCR, LUT, LAP, OLA, 3PH, PLM, CHL, C7Z, LMT, DGA, PTY;{Chlorella ohadii}
Probab=38.14 E-value=35 Score=19.00 Aligned_cols=10 Identities=30% Similarity=0.139 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 22 A~rLg~~LYk 31 (31)
T 6ZZY_M 22 AVRLGVALYK 31 (31)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
No 11
>6L4U_M Photosystem I reaction center subunit XII; Photosystem I, ELECTRON TRANSPORT; HET: CL0, KC1, DD6, PQN, LMG, SF4, CLA, LHG, BCR, A86, LMT; 2.4A {Chaetoceros gracilis}
Probab=37.14 E-value=36 Score=18.84 Aligned_cols=10 Identities=30% Similarity=0.076 Sum_probs=0.0 Template_Neff=3.800
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 21 A~rLG~~Lyk 30 (30)
T 6L4U_M 21 AIRLGATLYN 30 (30)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
No 12
>7XQP_M Photosystem I reaction center subunit XII; Supercomplex, Membrane protein, State transitions, PHOTOSYNTHESIS; HET: NEX, DGD, XAT, CHL, LMU, PQN, LMG, CLA, LHG, SF4, LUT, BCR, TPO; 2.68A {Physcomitrium patens}
Probab=35.19 E-value=40 Score=18.89 Aligned_cols=10 Identities=30% Similarity=0.086 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 23 A~rLg~~LYk 32 (32)
T 7XQP_M 23 ALRLGKSLYQ 32 (32)
T ss_pred HHHHHHHHhC
No 13
>8T0P_A Inner kinetochore subunit OKP1; Okp1, Cse4, Ame1, Kinetochore, CELL CYCLE; HET: SO4; 1.73A {Saccharomyces cerevisiae}
Probab=34.71 E-value=39 Score=25.30 Aligned_cols=13 Identities=23% Similarity=0.682 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred CCCCChHHHHHHh
Q FD01845954_005 8 SIYDFKEPIRQHY 20 (88)
Q Consensus 8 ~~WDhK~~i~~~~ 20 (88)
.|||+|+.|++.|
T Consensus 3 ~pWdFk~lIr~ef 15 (152)
T 8T0P_A 3 RPWEFRKVIQAEY 15 (152)
T ss_dssp CTTCHHHHHHHHH
T ss_pred ChhhHHHHHHHHH
No 14
>6KMW_aM Photosystem I reaction center subunit XII; Photosystem I, ELECTRON TRANSPORT; HET: CLA, CL0, PQN, SF4, LMG, UNL, BCR, LHG, LMT; 2.35A {Halomicronema hongdechloris C2206}
Probab=33.58 E-value=45 Score=18.56 Aligned_cols=10 Identities=20% Similarity=-0.114 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 22 A~rLg~~LYk 31 (31)
T 6KMW_aM 22 AFRLSTELYK 31 (31)
T ss_pred HHHHHHHHhC
No 15
>6KMX_cM Photosystem I reaction center subunit XII; Photosystem I, ELECTRON TRANSPORT; HET: CLA, CL0, PQN, SF4, LMG, UNL, BCR, LHG, LMT, F6C; 2.41A {Halomicronema hongdechloris C2206}
Probab=33.58 E-value=45 Score=18.56 Aligned_cols=10 Identities=20% Similarity=-0.114 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 22 A~rLg~~LYk 31 (31)
T 6KMX_cM 22 AFRLSTELYK 31 (31)
T ss_pred HHHHHHHHhC
No 16
>7S3D_M PsaM; Photosystem I, Far-red light photoacclimation, Chlorophyll f, Ferredoxin, PsaF, PsaJ, PHOTOSYNTHESIS; HET: CLA, FES, CL0, PQN, SF4, LMG, BCR, LHG, LMT, F6C; 2.91A {Synechococcus sp. PCC 7335}
Probab=33.48 E-value=46 Score=18.51 Aligned_cols=10 Identities=20% Similarity=-0.081 Sum_probs=0.0 Template_Neff=4.000
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 22 A~rLg~~LYk 31 (31)
T 7S3D_M 22 ALRLATELYK 31 (31)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHHHhC
No 17
>2K19_A Putative piscicolin 126 immunity protein; PisI, immunity protein, bacteriocin, IMMUNE SYSTEM, ANTIMICROBIAL PROTEIN; NMR {Carnobacterium maltaromaticum}
Probab=30.63 E-value=31 Score=23.61 Aligned_cols=7 Identities=43% Similarity=0.880 Sum_probs=0.0 Template_Neff=5.700
Q ss_pred ccCeeeh
Q FD01845954_005 39 SNLDWGI 45 (88)
Q Consensus 39 SNIHYGY 45 (88)
|||.|||
T Consensus 92 s~IRygy 98 (98)
T 2K19_A 92 SNIRYGY 98 (98)
T ss_dssp CSCCTTC
T ss_pred HccccCC
No 18
>7Y3F_M PsaM; Photosystem I, ELECTRON TRANSPORT, isiA, PHOTOSYNTHESIS; HET: CL0, PQN, LHG, CLA, SF4, LMG, BCR, LMT; 2.62A {Nostoc sp.}
Probab=28.27 E-value=62 Score=19.16 Aligned_cols=10 Identities=20% Similarity=-0.153 Sum_probs=0.0 Template_Neff=3.400
Q ss_pred HHHHHHHHHH
Q FD01845954_005 76 ATDEGYKLAI 85 (88)
Q Consensus 76 ai~iGi~L~~ 85 (88)
|+++|.+||+
T Consensus 31 A~rLG~~LYk 40 (40)
T 7Y3F_M 31 AWRLATELYK 40 (40)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
No 19
>PF10777.13 ; YlaC ; Inner membrane protein YlaC
Probab=25.32 E-value=61 Score=24.39 Aligned_cols=29 Identities=10% Similarity=-0.007 Sum_probs=0.0 Template_Neff=3.900
Q ss_pred CCCCCCCChHHHHHHhccccccCCCCeEEEeeccc
Q FD01845954_005 5 TKISIYDFKEPIRQHYGAMLRIGNDAKIYSNEGFS 39 (88)
Q Consensus 5 ~~g~~WDhK~~i~~~~g~~~~~~~~~~~~~yDvwS 39 (88)
.|.-+-.+|..|++++.. .+..++|||++
T Consensus 121 sp~V~~~~K~~l~~~~~~------KG~l~FyDvy~ 149 (154)
T J7SKC9_MORMO/1 121 HPQVSDSLKQEIRHMTET------KGTVSFYDLHL 149 (154)
T ss_pred CCCCCHHHHHHHHHHHhc------cCCcccchhhh
No 20
>6A7F_c major coat protein p8; filamentous bacteriophage, major coat protein, VIRAL PROTEIN; 3.4A {Filamentous phage}
Probab=25.01 E-value=84 Score=19.35 Aligned_cols=9 Identities=11% Similarity=-0.238 Sum_probs=0.0 Template_Neff=5.000
Q ss_pred HHHHHHHhc
Q FD01845954_005 79 EGYKLAINS 87 (88)
Q Consensus 79 iGi~L~~~y 87 (88)
|||+|++|+
T Consensus 40 igikLfKK~ 48 (53)
T 6A7F_c 40 LVIRLFKKF 48 (53)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
No 21
>8B3Q_EnE Capsid protein G8P; Viral proteins, capsid, VIRUS; 2.58A {Enterobacteria phage f1}
Probab=23.55 E-value=94 Score=18.89 Aligned_cols=9 Identities=33% Similarity=0.150 Sum_probs=0.0 Template_Neff=5.100
Q ss_pred HHHHHHHhc
Q FD01845954_005 79 EGYKLAINS 87 (88)
Q Consensus 79 iGi~L~~~y 87 (88)
|||+|++|+
T Consensus 37 igikLfKKf 45 (50)
T 8B3Q_EnE 37 IGIKLFKKF 45 (50)
T ss_pred HHHHHHHHH
No 22
>PF19857.3 ; DUF6332 ; Family of unknown function (DUF6332)
Probab=21.61 E-value=1.6e+02 Score=20.10 Aligned_cols=12 Identities=33% Similarity=0.742 Sum_probs=0.0 Template_Neff=4.400
Q ss_pred HHHHHHHHHHHH
Q FD01845954_005 73 DDIATDEGYKLA 84 (88)
Q Consensus 73 D~~ai~iGi~L~ 84 (88)
|..+||||+.|.
T Consensus 8 DA~TVEI~yAl~ 19 (85)
T A0A0U3FFK6_9AC 8 DALTVEVGYALV 19 (85)
T ss_pred HHHHHHHHHHHH
No 23
>PF08038.16 ; Tom7 ; TOM7 family
Probab=20.77 E-value=59 Score=18.56 Aligned_cols=6 Identities=33% Similarity=0.955 Sum_probs=0.0 Template_Neff=5.900
Q ss_pred CeeehH
Q FD01845954_005 41 LDWGIL 46 (88)
Q Consensus 41 IHYGYV 46 (88)
+||||+
T Consensus 14 ~h~Gfi 19 (40)
T G0SE07_CHATD/2 14 IHYGYL 19 (40)
T ss_pred hhcccc