Query FD01845373_00009 hypothetical protein
Match_columns 214
No_of_seqs 111 out of 377
Neff 4.68871
Searched_HMMs 86581
Date Wed Feb 28 00:05:52 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/2827847.hhr -oa3m ../results/2827847.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4AQN_B PESTICIN; TOXIN, BACTER 99.3 2.3E-10 2.7E-15 102.2 17.5 146 21-194 184-332 (357)
2 PF16754.9 ; Pesticin ; Bacteri 98.9 3.3E-07 3.8E-12 65.6 13.9 19 149-167 111-129 (149)
3 7Z36_A Endolysin,Transcription 97.5 0.0017 2E-08 59.1 10.3 134 23-209 37-172 (482)
4 5JEA_K Superkiller protein 7,E 96.9 0.035 4E-07 50.1 12.3 126 38-212 136-263 (279)
5 5ZBQ_A Neuropeptide Y receptor 96.5 0.076 8.7E-07 47.8 11.4 127 38-212 385-513 (525)
6 6K69_B Engineered T4 lysozyme; 96.5 0.19 2.2E-06 42.0 12.7 133 42-212 45-190 (206)
7 7DDZ_A Human Neuropeptide Y Y2 96.5 0.044 5.1E-07 50.8 9.7 131 39-212 24-157 (665)
8 8EJC_R Free fatty acid recepto 96.4 0.048 5.6E-07 49.2 9.5 121 43-209 57-179 (501)
9 4TN3_B TRIM5/cyclophilin A fus 95.1 0.78 9E-06 40.0 11.3 133 25-212 250-384 (400)
10 6QAJ_A Endolysin,Transcription 95.0 0.72 8.3E-06 43.4 11.3 126 38-209 45-172 (544)
11 4HTT_A Sec-independent protein 95.0 0.98 1.1E-05 42.2 12.1 132 25-212 258-392 (418)
12 5VBA_A Lysozyme, ESX-1 secreti 94.8 0.68 7.8E-06 43.7 10.8 112 42-196 44-157 (437)
13 7BVQ_B Endolysin,Beta-1 adrene 94.6 0.96 1.1E-05 40.1 10.6 112 38-192 28-141 (462)
14 4XSJ_A Lysozyme,Calcium unipor 94.0 2.5 2.9E-05 36.5 11.6 122 42-209 25-148 (262)
15 5B2G_A Endolysin,Claudin-4; Me 93.8 2.6 3E-05 36.7 11.5 125 42-212 31-157 (364)
16 5YQR_A Endolysin/Membrane-anch 93.7 3.8 4.4E-05 34.3 11.9 116 38-196 21-139 (276)
17 5NDD_A Lysozyme,Proteinase-act 93.7 2.1 2.5E-05 39.8 11.4 126 43-214 48-175 (619)
18 6IIH_B Endolysin,Calcium uptak 93.7 2.3 2.6E-05 39.1 11.4 126 38-209 29-156 (493)
19 6A73_B COP9 signalosome comple 93.3 3.8 4.4E-05 36.9 11.9 122 42-212 159-282 (304)
20 7E40_B SPX domain-containing p 91.7 6.1 7E-05 35.3 11.1 121 42-212 222-345 (358)
21 6D9M_A Fusion protein of Endol 91.7 2.7 3.2E-05 36.3 8.7 97 106-214 55-153 (337)
22 6AJG_A Drug exporters of the R 91.5 4.8 5.6E-05 42.0 11.6 116 38-196 783-900 (943)
23 7MWY_A STING; STING, cyclic di 90.8 10 0.00012 35.1 12.0 122 42-209 27-150 (356)
24 4N9N_B Sterol uptake control p 90.3 1.3 1.6E-05 43.8 6.3 84 39-165 144-227 (438)
25 6ZX9_C Vpr protein fused to T4 90.3 16 0.00018 31.1 12.3 131 38-214 20-152 (258)
26 6A9J_A Endolysin,Autophagy-rel 90.0 13 0.00015 34.3 11.8 127 42-214 25-153 (389)
27 6XMV_A Hemolysin,Endolysin; BO 89.6 21 0.00024 31.4 12.3 139 24-214 190-330 (339)
28 7CN7_A Baseplate central spike 88.7 14 0.00016 28.4 10.6 118 28-193 29-152 (181)
29 6WSK_A Endolysin,CB1 cannabino 88.6 27 0.00031 32.6 13.0 129 38-212 39-169 (346)
30 6VMS_R Endolysin,D(2) dopamine 87.1 17 0.0002 32.2 10.3 116 38-196 28-145 (450)
31 6XYR_A T4Lnano,Endolysin,Calmo 86.3 15 0.00018 32.0 9.4 131 38-214 56-188 (361)
32 7EVY_D Sphingosine 1-phosphate 85.5 18 0.00021 33.7 10.0 94 108-213 80-176 (531)
33 4WTV_B Phosphatidylinositol 4- 84.9 21 0.00025 35.2 10.7 121 43-212 101-223 (514)
34 4YX7_C Oxygen-regulated invasi 81.8 38 0.00043 27.0 11.4 115 39-196 55-171 (197)
35 1WTH_A Tail-associated lysozym 78.1 25 0.00029 35.4 8.7 98 105-214 232-331 (584)
36 7LOG_A Lysozyme; mutant, lysoz 76.0 52 0.0006 25.4 8.5 82 107-197 56-139 (172)
37 4EPI_A Pesticin, Lysozyme Chim 75.6 49 0.00056 31.4 9.4 97 106-214 221-319 (330)
38 8THL_R Endolysin,Alpha-1A adre 74.9 33 0.00038 31.8 7.9 79 109-196 81-161 (503)
39 4XES_A Neurotensin receptor ty 67.8 76 0.00087 29.2 8.5 94 104-209 429-524 (541)
40 7RX9_A Phosphatidylinositol 3, 64.5 83 0.00096 30.3 8.4 89 109-212 323-413 (606)
41 2QB0_B TELSAM domain - Lysozym 64.1 1E+02 0.0012 25.3 8.0 79 109-196 137-217 (241)
42 4IAP_B Oxysterol-binding prote 63.8 1.2E+02 0.0014 24.7 8.6 89 109-209 76-166 (260)
43 6LB8_C Endolysin,Calcium uptak 61.9 96 0.0011 29.4 8.2 79 109-196 66-146 (527)
44 8GTI_B Endolysin; MEMBRANE PRO 61.1 97 0.0011 22.7 7.7 79 109-196 57-137 (160)
45 4E97_B Lysozyme; Hydrolase, Al 57.6 1.5E+02 0.0017 23.7 8.3 80 109-197 81-162 (187)
46 PF11508.12 ; DUF3218 ; Protein 57.5 25 0.00029 32.4 3.6 49 30-87 132-180 (213)
47 2O7A_A Lysozyme; Protein foldi 56.1 1.4E+02 0.0016 22.8 8.7 87 110-212 1-90 (124)
48 6F03_C BPSL2520; Antigen, Burk 55.9 1.1E+02 0.0013 26.8 7.1 107 55-180 43-149 (199)
49 7XE7_A Endolysin; Intermolecul 53.5 1.4E+02 0.0016 22.2 7.6 81 107-196 56-138 (164)
50 PF00959.23 ; Phage_lysozyme ; 53.1 1.4E+02 0.0017 22.2 7.9 86 109-212 18-119 (119)
51 5I14_A mutated and truncated T 52.0 1.5E+02 0.0018 22.2 9.7 97 104-212 10-108 (121)
52 PF14747.10 ; DUF4473 ; Domain 49.8 44 0.00051 25.8 3.4 25 53-82 2-26 (78)
53 5W0P_C Endolysin,Rhodopsin,S-a 49.0 1.6E+02 0.0019 30.4 8.0 80 108-196 56-137 (906)
54 2IGS_H Hypothetical protein; h 48.9 42 0.00048 31.3 3.6 49 30-87 136-184 (219)
55 6VBU_2 Bardet-Biedl syndrome 2 48.0 74 0.00086 32.3 5.5 75 113-192 635-715 (721)
56 PF14174.10 ; YycC ; YycC-like 45.9 33 0.00039 25.2 2.1 17 70-86 2-18 (49)
57 4NSO_A Effector protein; Helix 43.7 2E+02 0.0023 24.8 6.8 183 1-214 101-288 (301)
58 7RGR_A Artificial protein L056 43.2 2.3E+02 0.0026 21.6 9.2 94 109-214 62-157 (168)
59 6VBU_7 Bardet-Biedl syndrome 7 43.1 69 0.0008 33.1 4.6 72 117-193 641-714 (715)
60 6BG3_A Endolysin, DCN1-like pr 35.1 6.2E+02 0.0072 24.4 9.9 112 42-196 47-160 (384)
61 3O39_B Periplasmic protein rel 33.2 1.2E+02 0.0014 22.9 3.5 64 55-126 45-108 (108)
62 4KWA_B Transcriptional regulat 32.7 3.1E+02 0.0036 20.6 5.6 120 56-192 11-135 (195)
63 1XOU_A EspA; coiled coil, heli 32.4 4.8E+02 0.0055 24.0 7.6 98 47-166 21-122 (192)
64 6K41_R Alpha-2A adrenergic rec 31.3 6.9E+02 0.0079 23.7 10.0 112 42-196 69-182 (512)
65 6IU5_E VIT1; membrane protein, 31.3 1.9E+02 0.0022 20.2 4.1 44 55-103 28-71 (79)
66 7JOZ_R Endolysin,D(1A) dopamin 30.4 5.2E+02 0.006 24.7 7.7 84 104-196 98-183 (540)
67 PF19795.3 ; DUF6279 ; Family o 29.7 5.8E+02 0.0067 22.4 7.9 126 56-209 37-167 (197)
68 5IHF_B VirG-like protein; LTxx 29.7 2.1E+02 0.0024 21.4 4.2 64 55-126 53-116 (116)
69 PF04256.16 ; DUF434 ; Protein 28.2 2.6E+02 0.003 20.5 4.3 39 85-131 16-54 (56)
70 PF14210.10 ; DUF4322 ; Domain 28.0 94 0.0011 24.4 2.1 45 48-97 22-66 (66)
71 3ITF_B Periplasmic adaptor pro 27.6 3.7E+02 0.0043 20.8 5.4 70 55-132 73-142 (145)
72 4ICH_B Transcriptional regulat 27.4 3.9E+02 0.0046 23.0 6.0 120 56-192 127-251 (311)
73 8K4L_B Nuclear respiratory fac 27.0 3.7E+02 0.0043 25.8 6.1 67 60-132 4-74 (232)
74 8B2S_A GH24 family muramidase; 26.3 4.7E+02 0.0054 21.4 6.0 89 109-212 134-227 (245)
75 2KZC_A Uncharacterized protein 25.9 1.5E+02 0.0017 23.1 3.0 22 76-97 14-35 (85)
76 6ET6_A Lysozyme; muramidase, L 25.7 5.7E+02 0.0066 20.9 8.6 87 109-212 99-188 (196)
77 6MZM_A Transcription initiatio 25.5 6.6E+02 0.0076 26.3 8.0 118 5-138 358-495 (496)
78 PF12105.12 ; SpoU_methylas_C ; 24.6 1.6E+02 0.0019 21.6 2.8 21 111-131 17-37 (54)
79 6GHD_H Emerin; nuclear envelop 24.3 1.8E+02 0.0021 18.0 2.7 36 47-82 1-36 (45)
80 PF06518.15 ; DUF1104 ; Protein 24.0 1.9E+02 0.0021 23.3 3.2 85 49-135 1-86 (93)
81 6TGJ_A Ribonuclease M5; RNase 23.6 3.3E+02 0.0038 21.5 4.5 65 59-129 26-90 (90)
82 6XFK_A Type 3 secretion system 23.5 1.5E+02 0.0018 22.8 2.5 48 117-166 4-51 (68)
83 PF18908.4 ; DUF5663 ; Protein 23.0 4.2E+02 0.0048 19.7 4.8 68 109-193 10-77 (86)
84 3QZC_B Periplasmic protein Cpx 22.8 5E+02 0.0058 19.5 5.2 69 55-131 44-112 (117)
85 PF07345.15 ; ATPaseInh_sub_z ; 22.8 1.9E+02 0.0021 23.3 3.0 22 76-97 33-54 (102)
86 2NP5_D Transcriptional regulat 22.8 5.4E+02 0.0063 19.7 6.9 121 56-193 16-140 (203)
87 6AYH_A TetR family transcripti 22.2 5.6E+02 0.0065 19.6 5.6 120 56-192 20-140 (201)
88 3ZG1_C NICKEL AND COBALT RESIS 21.7 4.1E+02 0.0047 19.8 4.5 65 55-127 81-145 (148)
89 2GFN_B HTH-type transcriptiona 21.6 5.9E+02 0.0068 19.6 6.9 120 56-192 16-141 (209)
90 2NX4_C Transcriptional regulat 21.5 5.7E+02 0.0065 19.4 6.6 120 56-192 17-140 (194)
91 7VZG_D PscD'; membrane protein 21.4 3.3E+02 0.0039 21.1 3.9 37 89-129 13-49 (70)
92 8GUG_C DUF2384 domain-containi 21.0 3.5E+02 0.004 22.3 4.4 67 50-121 23-92 (150)
93 4OVT_A TRAP dicarboxylate tran 20.9 1.7E+02 0.002 26.2 2.8 64 148-214 245-323 (324)
94 7TJL_A De novo designed protei 20.7 4.6E+02 0.0053 21.4 4.7 39 75-131 54-92 (93)
95 8F2R_B COMM domain-containing 20.6 4.4E+02 0.005 22.2 4.9 50 52-110 76-125 (199)
96 2Y9J_q LIPOPROTEIN PRGK; PROTE 20.3 3.8E+02 0.0044 22.9 4.6 82 49-134 6-101 (170)
97 PF09077.15 ; Phage-MuB_C ; Mu 20.1 3.7E+02 0.0043 19.3 3.9 41 44-89 3-46 (80)
98 PF21763.1 ; DHH_CID ; DHH-CID 20.0 4.8E+02 0.0055 19.9 4.6 43 85-127 23-72 (84)
No 1
>4AQN_B PESTICIN; TOXIN, BACTERIOCIN, COLICIN, THREE DOMAINS, MURAMIDASE; 1.98A {YERSINIA PESTIS}
Probab=99.32 E-value=2.3e-10 Score=102.16 Aligned_cols=146 Identities=19% Similarity=0.250 Sum_probs=113.4 Template_Neff=10.000
Q ss_pred CccCcCCc-CCCCCCccccCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhcc
Q FD01845373_000 21 IYFSRRPH-VPNNNGAVIGVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKID 99 (214)
Q Consensus 21 ~yfSR~~H-~P~~~~~v~~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~ 99 (214)
.|++...| +|.+. ||+|||.||||++++.. .+...| ++...+..+...+|+++..|..++....
T Consensus 184 ~y~~~~~~~~~~~~------sgvtiG~G~dlg~~~~~----~l~~~g-----~~~~~~~~~~~~~g~~~~~a~~~~~~~~ 248 (357)
T 4AQN_B 184 SHFPSNPSSDYFNS------TGVTFGSGVDLGQRSKQ----DLLNDG-----VPQYIADRLDGYYMLRGKEAYDKVRTAP 248 (357)
T ss_dssp EECCCCSSSTTTTT------CBCEEETTEECTTCCHH----HHHHTT-----CCHHHHHHTTTTTTCBHHHHHHHHHHSC
T ss_pred ccCCCCCCCCccCC------CCcEEEeeeeCCCCCHH----HHHHcC-----CCHHHHHHHHHhhccccHHHHHHHHhCC
Confidence 34444444 34555 99999999999999976 456789 9999999999999999999999998754
Q ss_pred ccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCC-CcccHHHHHH
Q FD01845373_000 100 NEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDN-SPRTRRYFIN 178 (214)
Q Consensus 100 ~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDy-t~~tR~~iq~ 178 (214)
. .||..|+..|+...|..+...+.+.+.+.. ....|..|+..+++++||+.|+..+ ....+..+..
T Consensus 249 ---~----~lt~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~alv~~~y~~G~~~~~~~~~~~~ 315 (357)
T 4AQN_B 249 ---L----TLSDNEAHLLSNIYIDKFSHKIEGLFNDAN------IGLRFSDLPLRTRTALVSIGYQKGFKLSRTAPTVWN 315 (357)
T ss_dssp ---C----BCCHHHHHHHHHHHHHHHHHHHHHHHHHTC------CSSCGGGSCHHHHHHHHHHHHHHCSCHHHHSHHHHH
T ss_pred ---C----CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCCHHHCCHHHHHHHHhHHhcCCCCcccccHHHHH
Confidence 3 689999999999999999999998887532 3578999999999999999999442 2222333344
Q ss_pred HHHhC-HHHHHHHHhcc
Q FD01845373_000 179 DLNEC-RQSFKNNISNT 194 (214)
Q Consensus 179 ~~~~n-~~~~~~~i~~~ 194 (214)
.+..+ ..++...|.+.
T Consensus 316 ~~~~~~~~~~~~~l~~~ 332 (357)
T 4AQN_B 316 KVIAKDWNGLVNAFNNI 332 (357)
T ss_dssp HHTTTCHHHHHHHHHTC
T ss_pred HHHcCCHHHHHHHHHhh
Confidence 55555 77777766653
No 2
>PF16754.9 ; Pesticin ; Bacterial toxin homologue of phage lysozyme, C-term
Probab=98.87 E-value=3.3e-07 Score=65.59 Aligned_cols=19 Identities=16% Similarity=0.268 Sum_probs=9.7 Template_Neff=13.100
Q ss_pred HHcCHHHHHHHHhheeCCC
Q FD01845373_000 149 DAFEQKIQDVLVDLTFRGD 167 (214)
Q Consensus 149 ~~L~~~IkdvlVDL~YrGD 167 (214)
..++.....+++++.++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~g 129 (149)
T K9Y9N0_HALP7/7 111 NQLPPEAQTVIADVATQYG 129 (149)
T ss_pred HHCCHHHHHHHHHHHHhcC
Confidence 3444455555555555543
No 3
>7Z36_A Endolysin,Transcription intermediary factor 1-beta,Isoform 2 of Transcription intermediary factor 1-beta; Transcription factor, TRIM family, KRAB domain, CRISPRi, TRANSCRIPTION; 2.8A {Homo sapiens}
Probab=97.52 E-value=0.0017 Score=59.14 Aligned_cols=134 Identities=11% Similarity=0.084 Sum_probs=0.0 Template_Neff=11.400
Q ss_pred cCcCCcCCCCCCccccCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccC
Q FD01845373_000 23 FSRRPHVPNNNGAVIGVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEV 102 (214)
Q Consensus 23 fSR~~H~P~~~~~v~~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~ 102 (214)
+...++.++. +++|||-|++++..+...........+ +.... .
T Consensus 37 ~~~~~y~d~~-------g~~tig~G~~~~~~~~~~~~~~~~~~~-----~~~~~-------------------------~ 79 (482)
T 7Z36_A 37 LRLKIYKDTE-------GYYTIGIGHLLTKSPSLNAAKSELDKA-----IGRNC-------------------------N 79 (482)
T ss_dssp CEEEEEECTT-------SCEEEETTEEEESSSCHHHHHHHHHHH-----HTSCC-------------------------S
T ss_pred ceeEeeeCCC-------CCeEEEEEeecCCCcchHHHHHHHHHH-----hcccC-------------------------C
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHH
Q FD01845373_000 103 PKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLN 181 (214)
Q Consensus 103 ~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~ 181 (214)
+ .||.++-..||......++..+.+.+.. ...|+.|++..+++|+||.|......-.+-- +..++.
T Consensus 80 ~----~it~~~a~~l~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~n~G~~~~~~~~~~~~~~~ 146 (482)
T 7Z36_A 80 G----VITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQ 146 (482)
T ss_dssp S----BCCHHHHHHHHHHHHHHHHHHHHHCTTT---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHH
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHHHhccc---------cHHHHhCCHHHHHHHHHHHHhccccchhccHHHHHHHH
Q ss_pred hC-HHHHHHHHhcccchhccCCCchHHHH
Q FD01845373_000 182 EC-RQSFKNNISNTHWLTAFSVPRARFNA 209 (214)
Q Consensus 182 ~n-~~~~~~~i~~~~W~~~~~Vp~dRf~r 209 (214)
.+ ..+....|.+..|. +-...|..+
T Consensus 147 ~~~~~~a~~~~~~~~~~---~~~~~r~~~ 172 (482)
T 7Z36_A 147 QKRWDEAAVNLAKSIWY---NQTPNRAKR 172 (482)
T ss_dssp TTCHHHHHHHHTTSHHH---HHSHHHHHH
T ss_pred cCCHHHHHHHHHcChhh---cCCCchhhH
No 4
>5JEA_K Superkiller protein 7,Endolysin; exosome, Ski7, nuclease, RNA degradation, hydrolase- RNA complex, HYDROLASE-RNA complex; HET: MPD; 2.65A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
Probab=96.94 E-value=0.035 Score=50.14 Aligned_cols=126 Identities=14% Similarity=0.152 Sum_probs=0.0 Template_Neff=8.800
Q ss_pred cCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHH
Q FD01845373_000 38 GVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFL 117 (214)
Q Consensus 38 ~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~L 117 (214)
..+.+|||.|++++..+.......-.... +. ...-. .||.+|-..|
T Consensus 136 ~~g~~TIG~G~~l~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~it~~~a~~l 181 (279)
T 5JEA_K 136 TEGYYTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEKL 181 (279)
T ss_dssp C-----CTTTC--------------------------------------------------------------CGGGHHH
T ss_pred CCCCeEEEeEEeCCCChhhhHHHHHHHHH-----hc-------------------------cccCC----CCCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeC-CCCCcccHHHHHHHHHhC-HHHHHHHHhccc
Q FD01845373_000 118 FKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFR-GDNSPRTRRYFINDLNEC-RQSFKNNISNTH 195 (214)
Q Consensus 118 F~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~Yr-GDyt~~tR~~iq~~~~~n-~~~~~~~i~~~~ 195 (214)
|......++..+++.+.. .-.|+.|++..++.|+|+.|. |...-..-..+..++.++ ..+....|.+..
T Consensus 182 l~~~l~~~~~~v~~~~~~---------~~~~~~L~~~~~~ALvs~~yN~G~~~~~~~~~~~~~i~~gd~~~aa~~i~~~~ 252 (279)
T 5JEA_K 182 FNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSR 252 (279)
T ss_dssp HHHHHHHHHHHHHHSTTT---------HHHHHHSCHHHHHHHHHHC--------CTTCCTTC------------------
T ss_pred HHHHHHHHHHHHHHHccc---------chhHHhCCHHHHHHHHHHHccCChhhhccCHHHHHHHHCCCHHHHHHHHHhch
Q ss_pred chhccCCCchHHHHHHH
Q FD01845373_000 196 WLTAFSVPRARFNARKD 212 (214)
Q Consensus 196 W~~~~~Vp~dRf~rR~~ 212 (214)
|. .-.. .||..
T Consensus 253 w~---~~~~---~Rr~~ 263 (279)
T 5JEA_K 253 WH---NQTP---NRAKR 263 (279)
T ss_dssp -----CCCS---SCCCC
T ss_pred hc---cCCH---HHHHH
No 5
>5ZBQ_A Neuropeptide Y receptor type 1,T4 Lysozyme; G Protein-Coupled Receptor, Receptor Inhibitor, Complex structure, SIGNALING PROTEIN; HET: 9AO; 2.7A {Homo sapiens}
Probab=96.55 E-value=0.076 Score=47.85 Aligned_cols=127 Identities=13% Similarity=0.123 Sum_probs=0.0 Template_Neff=12.400
Q ss_pred cCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHH
Q FD01845373_000 38 GVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFL 117 (214)
Q Consensus 38 ~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~L 117 (214)
..+..|+|-|.++++.+.......-..+. .. ..... .||.+|...|
T Consensus 385 ~~~~~t~~~g~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~i~~~~~~~~ 430 (525)
T 5ZBQ_A 385 TEGYYTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEKL 430 (525)
T ss_dssp TTSCEEEETTEEEESSSCHHHHHHHHHHH-----HT-------------------------SCCSS----BCCHHHHHHH
T ss_pred CCCceEeeeeccccCCCcchhhhhhHchh-----cc-------------------------cccCC----CCCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHHHHHhccc
Q FD01845373_000 118 FKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFKNNISNTH 195 (214)
Q Consensus 118 F~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~~~i~~~~ 195 (214)
+...-..+++.+++.+.. ..+|..||+..++.+||+.|+-....-.... +.+.+.++ ..+..+.|....
T Consensus 431 ~~~~~~~~~~~v~~~~~~---------~~~~~~l~~~~~~~l~~~~~n~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (525)
T 5ZBQ_A 431 FNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSR 501 (525)
T ss_dssp HHHHHHHHHHHHHHSTTH---------HHHHHHSCHHHHHHHHHHHHHTCHHHHTTCHHHHHHHHTTCHHHHHHC---CH
T ss_pred HHHHHHHHHHHHHHHccc---------cchHhcCCHHHHHHHHHHHHhcCcchhhchHHHHHHHHcCCHHHHHHHHHhcc
Q ss_pred chhccCCCchHHHHHHH
Q FD01845373_000 196 WLTAFSVPRARFNARKD 212 (214)
Q Consensus 196 W~~~~~Vp~dRf~rR~~ 212 (214)
|. +-... ||+.+
T Consensus 502 ~~---~~~~~--rr~~e 513 (525)
T 5ZBQ_A 502 WY---NQTPN--RAKRV 513 (525)
T ss_dssp HH---HHCHH--HHHHH
T ss_pred cc---cCCHH--HHHHH
No 6
>6K69_B Engineered T4 lysozyme; antibody, protein design, STRUCTURAL PROTEIN; 2.401A {Homo sapiens} SCOP: d.2.1.3, l.1.1.1
Probab=96.48 E-value=0.19 Score=42.02 Aligned_cols=133 Identities=15% Similarity=0.156 Sum_probs=0.0 Template_Neff=10.200
Q ss_pred cEeCccccCCCC-----------CHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCC
Q FD01845373_000 42 VTFGRGLDLGQQ-----------TETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLT 110 (214)
Q Consensus 42 VTIGRGYDmg~r-----------s~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT 110 (214)
+|||-|+.+... +..++.+++..+. +..+............... ||
T Consensus 45 ~tig~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~-----~s 101 (206)
T 6K69_B 45 YTIGIGHLLTKSPVEGGGGSGGGGSEKLMKAFESLS------------------LFQAKSELDKAIGRNTNGV-----IT 101 (206)
T ss_dssp EEEETTEEEEECC------------CHHHHHHHHHH------------------HHHHHHHHHHHHTSCCTTB-----CC
T ss_pred EEEeeeeccCCCCCCCCCCCCCCCHHHHHHHHHHhh------------------hhhchhHHHHHhhcccCCC-----CC
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHH
Q FD01845373_000 111 RKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFK 188 (214)
Q Consensus 111 ~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~ 188 (214)
.++-..||....+.++..+++.+.. .-.|+.|+...+++++|+.|........... +..++.++ ..+..
T Consensus 102 ~~~~~~l~~~~~~~~~~~v~~~~~~---------~~~~~~l~~~~~~al~~~~yn~G~~~~~~~~~~~~~l~~~~~~~aa 172 (206)
T 6K69_B 102 KDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAA 172 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTT---------HHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccc---------CcchhhCCHHHHHHHHHHHHhcChhhhhhcHHHHHHHHcCCHHHHH
Q ss_pred HHHhcccchhccCCCchHHHHHHH
Q FD01845373_000 189 NNISNTHWLTAFSVPRARFNARKD 212 (214)
Q Consensus 189 ~~i~~~~W~~~~~Vp~dRf~rR~~ 212 (214)
..+.+..|. .... .||..
T Consensus 173 ~~~~~~~~~---~~~~---~Rr~~ 190 (206)
T 6K69_B 173 VNLAKSRWY---NQTP---NRAKR 190 (206)
T ss_dssp HHHHSSHHH---HHSH---HHHHH
T ss_pred HHHHhchhh---hcCh---HHHHH
No 7
>7DDZ_A Human Neuropeptide Y Y2 Receptor fusion protein; neuropeptide Y Y2 receptor, MEMBRANE PROTEIN; HET: FMN, H46; 2.8A {Enterobacteria phage RB59}
Probab=96.47 E-value=0.044 Score=50.76 Aligned_cols=131 Identities=10% Similarity=0.071 Sum_probs=0.0 Template_Neff=12.500
Q ss_pred CCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHH
Q FD01845373_000 39 VSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLF 118 (214)
Q Consensus 39 ~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF 118 (214)
..++|||-|+++.... ...++.+..+..+...-.. .||++|-..|+
T Consensus 24 ~~~~tig~g~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~ 69 (665)
T 7DDZ_A 24 EGYYTIGIGHLLTKSP---------------------------SLNAAKSELDKAIGRNTNG-------VITKDEAEKLF 69 (665)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEeEEeecCCCh---------------------------hhhhccccchhhhhhcCCC-------ccCHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHHHHHhcc-c
Q FD01845373_000 119 KAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFKNNISNT-H 195 (214)
Q Consensus 119 ~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~~~i~~~-~ 195 (214)
....+.++..+++.+.. ...|++|++..+++++|+.|........+-. +..++.++ ..+..+.|... .
T Consensus 70 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~al~~~~~n~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (665)
T 7DDZ_A 70 NQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRW 140 (665)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHccc---------CcchhcCCHHHHHHHHHHHHhcCcccccccHHHHHHHHccCHHHHHHHHHhcch
Q ss_pred chhccCCCchHHHHHHH
Q FD01845373_000 196 WLTAFSVPRARFNARKD 212 (214)
Q Consensus 196 W~~~~~Vp~dRf~rR~~ 212 (214)
|....+-.......|..
T Consensus 141 ~~~~~~~~~~~~~~~~~ 157 (665)
T 7DDZ_A 141 YNQTPNRAKRVITTFRT 157 (665)
T ss_dssp -----------------
T ss_pred hhcCCchhhHHHHhccC
No 8
>8EJC_R Free fatty acid receptor 1; FFAR1, FFAs, diabetes, CryoEM, MEMBRANE PROTEIN; HET: 2YB;{Homo sapiens}
Probab=96.43 E-value=0.048 Score=49.19 Aligned_cols=121 Identities=12% Similarity=0.145 Sum_probs=0.0 Template_Neff=12.100
Q ss_pred EeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHH
Q FD01845373_000 43 TFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVY 122 (214)
Q Consensus 43 TIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y 122 (214)
|||-|+++...+.. .+++...+......... .||++|-..||....
T Consensus 57 tig~g~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~-------~it~~~a~~~~~~~~ 102 (501)
T 8EJC_R 57 TIGIGHLLTKSPSL---------------------------NAAKSELDKAIGRNTNG-------VITKDEAEKLFNQDV 102 (501)
T ss_pred EEEEEEEcCCChhh---------------------------hhHHHHHHHHhccCCCC-------ccCHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHHHHHhcccchhcc
Q FD01845373_000 123 KHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFKNNISNTHWLTAF 200 (214)
Q Consensus 123 ~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~~~i~~~~W~~~~ 200 (214)
+.+++.+++.+.. ...|+.|++..+++++|+.|+-...+-..-. +..++.++ ..+....+.+..|.
T Consensus 103 ~~~~~~~~~~~~~---------~~~~~~l~~~~~~~l~~~~~n~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--- 170 (501)
T 8EJC_R 103 DAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY--- 170 (501)
T ss_pred HHHHHHHHHHccc---------chhhhcCCHHHHHHHHHHHHHcCcchhhhcHHHHHHHHcCCHHHHHHHHHhcccc---
Q ss_pred CCCchHHHH
Q FD01845373_000 201 SVPRARFNA 209 (214)
Q Consensus 201 ~Vp~dRf~r 209 (214)
.-...|..+
T Consensus 171 ~~~~~r~~~ 179 (501)
T 8EJC_R 171 NQTPNRAKR 179 (501)
T ss_pred ccChhHHHH
No 9
>4TN3_B TRIM5/cyclophilin A fusion protein/T4 Lysozyme chimera; Trim protein Coiled-coil scaffold retroviral restriction factor, ANTIVIRAL PROTEIN; 3.1989A {Macaca mulatta}
Probab=95.13 E-value=0.78 Score=40.03 Aligned_cols=133 Identities=15% Similarity=0.134 Sum_probs=0.0 Template_Neff=12.300
Q ss_pred cCCcCCCCCCccccCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCc
Q FD01845373_000 25 RRPHVPNNNGAVIGVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPK 104 (214)
Q Consensus 25 R~~H~P~~~~~v~~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~ 104 (214)
+....+... ...|||-|+.+. .+-.+..+...+........
T Consensus 250 ~~~~~~~~~------~~~tig~g~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~- 290 (400)
T 4TN3_B 250 RLKIYKNTE------GYYTIGIGHLLT--------------------------------KSPSLNAAKSELDKAIGRNT- 290 (400)
T ss_dssp EEEEEECTT------SCEEEETTEECC--------------------------------SSSCHHHHHHHHHHHHSSCC-
T ss_pred eeeeccCCC------CceeecceeccC--------------------------------CCcchhHHHHHHHHHHCCCC-
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC
Q FD01845373_000 105 NEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC 183 (214)
Q Consensus 105 ~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n 183 (214)
...||.++-..||......++..+.+.+.. ...|+.|++..++++||+.|.-...+-..-. +..++.++
T Consensus 291 -~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~n~g~~~~~~~~~~~~~~~~~ 360 (400)
T 4TN3_B 291 -NGVITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQK 360 (400)
T ss_dssp -SSCCCHHHHHHHHHHHHHHHHHHHHTCTTT---------HHHHHTSCHHHHHHHHHHHHHTCHHHHTTCHHHHHHHHHT
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHHHhccc---------chhHhcCCHHHHHHHHHHHHHcCHHHHHhcHHHHHHHHcC
Q ss_pred -HHHHHHHHhcccchhccCCCchHHHHHHH
Q FD01845373_000 184 -RQSFKNNISNTHWLTAFSVPRARFNARKD 212 (214)
Q Consensus 184 -~~~~~~~i~~~~W~~~~~Vp~dRf~rR~~ 212 (214)
..+....|.+..|..... .||.+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~------~r~~~ 384 (400)
T 4TN3_B 361 RWDEAAVNLAKSRWYNQTP------NRAKR 384 (400)
T ss_dssp CHHHHHHHTTSSHHHHHCH------HHHHH
T ss_pred CHHHHHHHHHhchHHhhch------hHHHH
No 10
>6QAJ_A Endolysin,Transcription intermediary factor 1-beta; Transcriptional repressor epigenetic silencing histone H3 lysine 9 methylation (H3K9me3) endogenous retrovirus ; 2.901A {Enterobacteria phage T4}
Probab=94.97 E-value=0.72 Score=43.36 Aligned_cols=126 Identities=13% Similarity=0.105 Sum_probs=0.0 Template_Neff=11.300
Q ss_pred cCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHH
Q FD01845373_000 38 GVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFL 117 (214)
Q Consensus 38 ~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~L 117 (214)
..+..|||-|+++. ..+-.......+........+ ..||.++-..|
T Consensus 45 ~~g~~tig~G~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~---~~it~~~~~~l 90 (544)
T 6QAJ_A 45 TEGYYTIGIGHLLT-------------------------------KSPSLNAAKSELDKAIGRNCN---GVITKDEAEKL 90 (544)
T ss_dssp TTSCEEEETTEEEE-------------------------------SSSCHHHHHHHHHHHHCSCCT---TBCCHHHHHHH
T ss_pred CCCceEEeeeeccC-------------------------------CCCCHHHHHHHHHHHhcccCC---CcCCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHHHHHhccc
Q FD01845373_000 118 FKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFKNNISNTH 195 (214)
Q Consensus 118 F~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~~~i~~~~ 195 (214)
|......++..+.+.+.. ...|+.|++..++.|+|+.|......-..-. +..++..+ ..+....|.+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~al~~~~~n~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (544)
T 6QAJ_A 91 FNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSI 161 (544)
T ss_dssp HHHHHHHHHHHHHHCSSS---------HHHHHTSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHTTCHHHHHHHHTTSH
T ss_pred HHHHHHHHHHHHHHHccc---------chHHHhCCHHHHHHHHHHHHHcCcchhcccHHHHHHHHcCCHHHHHHHHHhhH
Q ss_pred chhccCCCchHHHH
Q FD01845373_000 196 WLTAFSVPRARFNA 209 (214)
Q Consensus 196 W~~~~~Vp~dRf~r 209 (214)
|. .-+..|-.+
T Consensus 162 ~~---~~~~~r~~~ 172 (544)
T 6QAJ_A 162 WY---NQTPNRAKR 172 (544)
T ss_dssp HH---HHSHHHHHH
T ss_pred hh---hcCcchHHH
No 11
>4HTT_A Sec-independent protein translocase protein TatC, Lysozyme; Twin arginine translocase receptor, Membrane, HYDROLASE; 6.8A {Aquifex aeolicus VF5}
Probab=94.95 E-value=0.98 Score=42.16 Aligned_cols=132 Identities=13% Similarity=0.097 Sum_probs=0.0 Template_Neff=10.200
Q ss_pred cCCcCCCCCCccccCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCc
Q FD01845373_000 25 RRPHVPNNNGAVIGVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPK 104 (214)
Q Consensus 25 R~~H~P~~~~~v~~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~ 104 (214)
+....+... ..+|||.|+++...........-..++ ....
T Consensus 258 ~~~~y~d~~------g~~tiG~G~~~~~~~~~~~~~~~~~~~----------------------------------~~~~ 297 (418)
T 4HTT_A 258 RLKIYKDTE------GYYTIGIGHLLTKSPSLNAAKSELDKA----------------------------------IGRN 297 (418)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceeeeCCC------CCeEEeeeeccCCCcchhHHHHHHHHH----------------------------------hcCC
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC
Q FD01845373_000 105 NEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC 183 (214)
Q Consensus 105 ~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n 183 (214)
....+|.+|-..|+..-+..+++.+++.... ...|+++++..++.++|+.|.....+-.... +..++.++
T Consensus 298 ~~~~lt~~~a~~ll~~~l~~~~~~v~~~~~~---------~~~~~~l~~~~~~alvs~~yn~G~~~~~~~~~~~~~l~~g 368 (418)
T 4HTT_A 298 TNGVITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQK 368 (418)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHccc---------chhHHhCCHHHHHHHHHHHHhCCcchhcccHHHHHHHHcC
Q ss_pred -HHHHHHHHhcc-cchhccCCCchHHHHHHH
Q FD01845373_000 184 -RQSFKNNISNT-HWLTAFSVPRARFNARKD 212 (214)
Q Consensus 184 -~~~~~~~i~~~-~W~~~~~Vp~dRf~rR~~ 212 (214)
.++....|.+. ... +++ .||.+
T Consensus 369 d~~~a~~~l~~~~~~~---~~~----~Rr~~ 392 (418)
T 4HTT_A 369 RWDEAAVNLAKSRWYN---QTP----NRAKR 392 (418)
T ss_dssp -------------------------------
T ss_pred CHHHHHHHHHhcHHhh---cCc----hHHHH
No 12
>5VBA_A Lysozyme, ESX-1 secretion-associated protein EspG1 chimera; ESX-1, type VII secretion system, Rv3866, snm5, protein secretion, chaperone, hydrolase; HET: CL; 2.27A {Enterobacteria phage T4}
Probab=94.85 E-value=0.68 Score=43.66 Aligned_cols=112 Identities=14% Similarity=0.179 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred cEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHH
Q FD01845373_000 42 VTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAV 121 (214)
Q Consensus 42 VTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~ 121 (214)
.|||-|+.+...... +.+..-+........ ...||.+|-..||...
T Consensus 44 ~tig~G~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~--~~~it~~~a~~ll~~~ 89 (437)
T 5VBA_A 44 YTIGIGHLLTKSPSL--------------------------------NAAKSELDKAIGRNT--NGVITKDEAEKLFNQD 89 (437)
T ss_dssp EEEETTEEEECSSCH--------------------------------HHHHHHHHHHHTSCC--TTBCCHHHHHHHHHHH
T ss_pred EEEEEEEcCCCChhh--------------------------------HHHHHHHHHHhcccC--CCCCCHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHHHHHHHhcccc
Q FD01845373_000 122 YKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQSFKNNISNTHW 196 (214)
Q Consensus 122 Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~~~~~i~~~~W 196 (214)
...++..+++.++. .-+|+.|++..++.++|+.|......-.. ..+..++.++ ..+....|.+..|
T Consensus 90 ~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~yn~G~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~ 157 (437)
T 5VBA_A 90 VDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRW 157 (437)
T ss_dssp HHHHHHHHHTCTTT---------HHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHHHHHHTTSHH
T ss_pred HHHHHHHHHHHccc---------ccchhcCCHHHHHHHHHHHhhCCcchhccCHhHHHHHHCCCHHHHHHHHHcchh
No 13
>7BVQ_B Endolysin,Beta-1 adrenergic receptor chimera; G protein coupled receptor, membrane protein, SIGNALING PROTEIN; HET: CIT, SO4, CLR, 1WV, PG4, CAU, GLC; 2.5A {Enterobacteria phage T4}
Probab=94.64 E-value=0.96 Score=40.11 Aligned_cols=112 Identities=13% Similarity=0.078 Sum_probs=0.0 Template_Neff=12.500
Q ss_pred cCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHH
Q FD01845373_000 38 GVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFL 117 (214)
Q Consensus 38 ~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~L 117 (214)
.....|||-|..+...+...+......++ .. ..... .||++|...|
T Consensus 28 ~~~~~tig~g~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~~t~~~~~~l 73 (462)
T 7BVQ_B 28 TEGYYTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEKL 73 (462)
T ss_dssp TTCCEEEETTEEEESCSCHHHHHHHHHHH-----HS-------------------------SCCTT----BCCHHHHHHH
T ss_pred CCCCeEEeceecccCCcchhhHHHHHHHH-----hc-------------------------cCCCC----ccCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHHHHHh
Q FD01845373_000 118 FKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFKNNIS 192 (214)
Q Consensus 118 F~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~~~i~ 192 (214)
++.--..++..+++..+. ...|+.+++..+++++|+.|.....+....- ....+.++ .......+.
T Consensus 74 l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (462)
T 7BVQ_B 74 FNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLA 141 (462)
T ss_dssp HHHHHHHHHHHHHHSTTH---------HHHHHHSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhc---------cccccCCcHHHHHHHHHHHHhcCcCchhHHHHHHHHHHhhcHHHHHHHHh
No 14
>4XSJ_A Lysozyme,Calcium uniporter protein, mitochondrial; Membrane protein, Calcium channel, Mitochondria, TRANSPORT PROTEIN; HET: SO4; 1.8A {Enterobacteria phage T4}
Probab=93.97 E-value=2.5 Score=36.50 Aligned_cols=122 Identities=14% Similarity=0.156 Sum_probs=0.0 Template_Neff=10.600
Q ss_pred cEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHH
Q FD01845373_000 42 VTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAV 121 (214)
Q Consensus 42 VTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~ 121 (214)
+|||.|+.+...... +.....+-.......+ ..||.++-..||...
T Consensus 25 ~tiG~G~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~---~~it~~~a~~ll~~~ 70 (262)
T 4XSJ_A 25 YTIGIGHLLTKSPSL-------------------------------NAAKSELDKAIGRNTN---GVITKDEAEKLFNQD 70 (262)
T ss_dssp EEEETTEEEESSSCH-------------------------------HHHHHHHHHHHTSCCT---TBCCHHHHHHHHHHH
T ss_pred eEEEeEEeCCCChhh-------------------------------HHHHHHHHHhhccccC---CccCHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHH-HHHHHHHhC-HHHHHHHHhcccchhc
Q FD01845373_000 122 YKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRR-YFINDLNEC-RQSFKNNISNTHWLTA 199 (214)
Q Consensus 122 Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~-~iq~~~~~n-~~~~~~~i~~~~W~~~ 199 (214)
...++..+.+.+.. ...|+.|++.-++.++|+.|.......... .+..++.++ ..+....|....|.
T Consensus 71 l~~~~~~v~~~~~~---------~~~~~~l~~~~~~al~s~~yn~G~~~~~~~~~~~~~l~~gd~~~a~~~~~~~~~~-- 139 (262)
T 4XSJ_A 71 VDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY-- 139 (262)
T ss_dssp HHHHHHHHHHCTTH---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHHHHHHHTTSHHH--
T ss_pred HHHHHHHHHHHccc---------chhHhcCCHHHHHHHHHHHhhCCcchhcccHHHHHHHHccCHHHHHHHHHhchhc--
Q ss_pred cCCCchHHHH
Q FD01845373_000 200 FSVPRARFNA 209 (214)
Q Consensus 200 ~~Vp~dRf~r 209 (214)
.....|-.+
T Consensus 140 -~~~~~R~~~ 148 (262)
T 4XSJ_A 140 -NQTPNRAKR 148 (262)
T ss_dssp -HHSHHHHHH
T ss_pred -cCCchHHHH
No 15
>5B2G_A Endolysin,Claudin-4; Membrane protein, Complex, Cell-free protein expression system; HET: MSE; 3.5A {Enterobacteria phage T4}
Probab=93.85 E-value=2.6 Score=36.70 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred cEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHH
Q FD01845373_000 42 VTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAV 121 (214)
Q Consensus 42 VTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~ 121 (214)
.|||.|+++. ...-.......+-........ +.||.++-..||...
T Consensus 31 ~t~g~G~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 76 (364)
T 5B2G_A 31 YTIGIGHLLT-------------------------------KSPSLNAAKSELDKAIGRNTN---GVITKDEAEKLFNQD 76 (364)
T ss_dssp EEETTTEEEE-------------------------------CCSCHHHHHHHHHHHCSCCSS---SCCCHHHHHHHHHHH
T ss_pred eEEeeeecCC-------------------------------CCcchhHHHHHHHHHhccCCC---CCCCHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHHHHHhcccchhc
Q FD01845373_000 122 YKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFKNNISNTHWLTA 199 (214)
Q Consensus 122 Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~~~i~~~~W~~~ 199 (214)
.+.++..+++.+.. ...|+.|++..++.++|+.|...-..-.+-. +..++.++ ..+....+....|.
T Consensus 77 ~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~n~G~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-- 145 (364)
T 5B2G_A 77 VDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY-- 145 (364)
T ss_dssp HHHHHHHHHHSTTT---------HHHHTTSCHHHHHHHHHHHHHSCHHHHTTCHHHHHHHHTTCHHHHHHHHTSSHHH--
T ss_pred HHHHHHHHHHHccc---------cHhHhcCCHHHHHHHHHHHHhcCcchHHhhHHHHHHHHcCCHHHHHHHHHcCHHH--
Q ss_pred cCCCchHHHHHHH
Q FD01845373_000 200 FSVPRARFNARKD 212 (214)
Q Consensus 200 ~~Vp~dRf~rR~~ 212 (214)
.....|-.+-..
T Consensus 146 -~~~~~r~~~~~~ 157 (364)
T 5B2G_A 146 -NQTPNRAKRVIT 157 (364)
T ss_dssp -HHSHHHHHHHHH
T ss_pred -hhCcchhHHHHh
No 16
>5YQR_A Endolysin/Membrane-anchored lipid-binding protein LAM6 fusion protein; ligand binding domain, sterol, lipid transport, LTC1, TRANSPORT PROTEIN; HET: 2PE; 2.402A {Enterobacteria phage T4}
Probab=93.75 E-value=3.8 Score=34.29 Aligned_cols=116 Identities=14% Similarity=0.174 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred cCCc-cEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHH
Q FD01845373_000 38 GVSG-VTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHF 116 (214)
Q Consensus 38 ~~SG-VTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~ 116 (214)
...| .|||.|+.+...+.......=.... +. ..... .+|.++-..
T Consensus 21 d~~~~~tig~g~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~~t~~~~~~ 66 (276)
T 5YQR_A 21 NTEGYYTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEK 66 (276)
T ss_dssp CSSSCEEETTTEECCCSSSTHHHHHHHHHH-----C----------------------------CCS----SCCHHHHHH
T ss_pred CCCCCeEEecEeecCCCcchHHHHHHHHHH-----hc-------------------------cccCC----ccCHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHHHHHHHhcc
Q FD01845373_000 117 LFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQSFKNNISNT 194 (214)
Q Consensus 117 LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~~~~~i~~~ 194 (214)
|+......+...+.+.+.. .-.|+.|++..++.++|+.|......-.. ..+...+.++ ..+....|.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~al~~~~~n~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (276)
T 5YQR_A 67 LFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKS 137 (276)
T ss_dssp HHHHHHHHHHHHHHTCTTH---------HHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhccc---------cchHHhCCHHHHHHHHHhHHhCCccchhhhHHHHHHHHcCCHHHHHHHHHcC
Q ss_pred cc
Q FD01845373_000 195 HW 196 (214)
Q Consensus 195 ~W 196 (214)
.|
T Consensus 138 ~~ 139 (276)
T 5YQR_A 138 RW 139 (276)
T ss_dssp HH
T ss_pred cc
No 17
>5NDD_A Lysozyme,Proteinase-activated receptor 2,Soluble cytochrome b562,Proteinase-activated receptor 2; MEMBRANE PROTEIN, GPCR, 7TM; HET: 8TZ; 2.801A {Enterobacteria phage T4}
Probab=93.73 E-value=2.1 Score=39.77 Aligned_cols=126 Identities=13% Similarity=0.136 Sum_probs=0.0 Template_Neff=12.400
Q ss_pred EeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHH
Q FD01845373_000 43 TFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVY 122 (214)
Q Consensus 43 TIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y 122 (214)
|||-|..+..............++ ..-.....||.++-..||....
T Consensus 48 tig~G~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~t~~~~~~~~~~~~ 93 (619)
T 5NDD_A 48 TIGIGHLLTKSPSLNAAKSELDKA----------------------------------IGRNTNGVITKDEAEKLFNQDV 93 (619)
T ss_dssp EEETTEEEESSSCHHHHHHHHHHH----------------------------------HSSCCTTBCCHHHHHHHHHHHH
T ss_pred eeeeEeccCCCcchHHHHHHHHHh----------------------------------hcCCCCCCcCHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeC-CCCCcccHHHHHHHHHhC-HHHHHHHHhcccchhcc
Q FD01845373_000 123 KHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFR-GDNSPRTRRYFINDLNEC-RQSFKNNISNTHWLTAF 200 (214)
Q Consensus 123 ~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~Yr-GDyt~~tR~~iq~~~~~n-~~~~~~~i~~~~W~~~~ 200 (214)
+.+++.+.+.+.. ...|+.|++..+++++|+.|. |...-.....+...+.++ ..+....|.+..|.
T Consensus 94 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~n~G~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--- 161 (619)
T 5NDD_A 94 DAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY--- 161 (619)
T ss_dssp HHHHHHHHHCTTT---------HHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHHHHHHHSSHHH---
T ss_pred HHHHHHHHHhccc---------chhHHhCCHHHHHHHHHHHHhcChhhhccChHHHHHHHcCCHHHHHHHHHhcchh---
Q ss_pred CCCchHHHHHHHhC
Q FD01845373_000 201 SVPRARFNARKDYL 214 (214)
Q Consensus 201 ~Vp~dRf~rR~~yL 214 (214)
.=...|-.+-...+
T Consensus 162 ~~~~~r~~~~~~~~ 175 (619)
T 5NDD_A 162 NQTPNRAKRVITTF 175 (619)
T ss_dssp HHCHHHHHHHHHHH
T ss_pred hcCchHHHHHHHHH
No 18
>6IIH_B Endolysin,Calcium uptake protein 2, mitochondrial; calcium binding protein mitochondrial EF-hand T4L fusion protein, METAL BINDING PROTEIN, Calcium Binding; 1.958A {Enterobacteria phage T4}
Probab=93.73 E-value=2.3 Score=39.05 Aligned_cols=126 Identities=13% Similarity=0.113 Sum_probs=0.0 Template_Neff=11.800
Q ss_pred cCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHH
Q FD01845373_000 38 GVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFL 117 (214)
Q Consensus 38 ~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~L 117 (214)
..+..|||.|+.+. ..+.................+ ..||.+|-..|
T Consensus 29 ~~g~~tig~G~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~---~~it~~~~~~l 74 (493)
T 6IIH_B 29 TEGYYTIGIGHLLT-------------------------------KSPSLNAAKSELDKAIGRNTN---GVITKDEAEKL 74 (493)
T ss_dssp TTCCEEEETTEECC-------------------------------SSSCHHHHHHHHHHTTSSSCC---SSCCHHHHHHH
T ss_pred CCCCEEEeEEeecC-------------------------------CCcchhHHHHHHHHHhccCCC---CCCCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHHHHHhccc
Q FD01845373_000 118 FKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFKNNISNTH 195 (214)
Q Consensus 118 F~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~~~i~~~~ 195 (214)
|..-...++..+.+.+.. ...|+.|++..++++||+.|.-.-..-..-. +..++..+ ...-...+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~n~G~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 145 (493)
T 6IIH_B 75 FNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSI 145 (493)
T ss_dssp HHHHHHHHHHHHHTCTTH---------HHHHHHSCHHHHHHHHHHHHHHCTTGGGSCHHHHHHHHTTCHHHHHHHHTTSH
T ss_pred HHHHHHHHHHHHHHhhch---------hHHHHhCCHHHHHHHHHHHHhcCcchhhccHHHHHHHHcCCHHHHHHHHHhCH
Q ss_pred chhccCCCchHHHH
Q FD01845373_000 196 WLTAFSVPRARFNA 209 (214)
Q Consensus 196 W~~~~~Vp~dRf~r 209 (214)
|. +....|-.+
T Consensus 146 ~~---~~~~~r~~~ 156 (493)
T 6IIH_B 146 WY---NQTPNRAKR 156 (493)
T ss_dssp HH---HHSHHHHHH
T ss_pred HH---hcChhHHHH
No 19
>6A73_B COP9 signalosome complex subunit 2,Endolysin; subunit2 of COP9 Signalosome (CSN)., SIGNALING PROTEIN; HET: IHP, SO4; 2.447A {Homo sapiens}
Probab=93.26 E-value=3.8 Score=36.90 Aligned_cols=122 Identities=14% Similarity=0.157 Sum_probs=0.0 Template_Neff=9.900
Q ss_pred cEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHH
Q FD01845373_000 42 VTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAV 121 (214)
Q Consensus 42 VTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~ 121 (214)
+|||.|+.+...+.......-.... +. ..... .||.+|-..||...
T Consensus 159 ~tIG~G~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~it~~~a~~ll~~~ 204 (304)
T 6A73_B 159 YTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEKLFNQD 204 (304)
T ss_dssp EEEETTEEEESCSCHHHHHHHHHHH-----HT-------------------------SCCTT----BCCHHHHHHHHHHH
T ss_pred eEEeeeeeccCCcchHHHHHHHHHH-----hc-------------------------cCCCC----CCCHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHHHHHHHhcccchhc
Q FD01845373_000 122 YKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQSFKNNISNTHWLTA 199 (214)
Q Consensus 122 Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~~~~~i~~~~W~~~ 199 (214)
...++..+.+.+.. .-.|..|++.-++.+||+.|......-.. ..+..++.++ ..+....|.+..|.
T Consensus 205 l~~~~~~v~~~~~~---------~~~~~~l~~~~~~Alvs~~yn~G~~~~~~~~~~~~~l~~g~~~~a~~~~~~~~~~-- 273 (304)
T 6A73_B 205 VDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY-- 273 (304)
T ss_dssp HHHHHHHHHHSTTH---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHHHHHHHHTSHHH--
T ss_pred HHHHHHHHHHHccc---------chhHHhCCHHHHHHHHHHHhcCChhhhccCHHHHHHHHcCCHHHHHHHHHhchhh--
Q ss_pred cCCCchHHHHHHH
Q FD01845373_000 200 FSVPRARFNARKD 212 (214)
Q Consensus 200 ~~Vp~dRf~rR~~ 212 (214)
.... .||..
T Consensus 274 -~~~~---~Rr~~ 282 (304)
T 6A73_B 274 -NQTP---NRAKR 282 (304)
T ss_dssp -HHSH---HHHHH
T ss_pred -hcCh---HHHHH
No 20
>7E40_B SPX domain-containing protein 1,Endolysin; phosphate sensing and responding, InsP6-OsSPX1-OsPHR2 ternary complex, allosterically regulation, DNA binding inhibition, PLANT PROTEIN, PROTEIN BINDING; HET: IHP; 2.6A {Oryza sativa subsp. japonica}
Probab=91.69 E-value=6.1 Score=35.27 Aligned_cols=121 Identities=14% Similarity=0.144 Sum_probs=0.0 Template_Neff=11.200
Q ss_pred cEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHH
Q FD01845373_000 42 VTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAV 121 (214)
Q Consensus 42 VTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~ 121 (214)
+|||.|+++...+.......-.... +. ...-. .||.++=..|+..-
T Consensus 222 ~tig~G~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~~t~~~~~~~l~~~ 267 (358)
T 7E40_B 222 YTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEKLFNQD 267 (358)
T ss_dssp EEEETTEEEESCSCHHHHHHHHHHH-----HS-------------------------SCCTT----BCCHHHHHHHHHHH
T ss_pred eEeehhhcccCCcchHHHHHHHHHH-----hc-------------------------cccCC----CCCHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHHHHHHHhcc-cchh
Q FD01845373_000 122 YKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQSFKNNISNT-HWLT 198 (214)
Q Consensus 122 Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~~~~~i~~~-~W~~ 198 (214)
-..++..+.+.+.. ...|+.|++.-+++++|+.|......... ..+...+.++ ..+....|... ...
T Consensus 268 l~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~n~G~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~- 337 (358)
T 7E40_B 268 VDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYN- 337 (358)
T ss_dssp HHHHHHHHHTCTTT---------HHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHHHHHHTTSHHHH-
T ss_pred HHHHHHHHHHhccc---------chhHhcCCHHHHHHHHHHHHhCChhhHhhhHHHHHHHHcCCHHHHHHHHHhcHHhh-
Q ss_pred ccCCCchHHHHHHH
Q FD01845373_000 199 AFSVPRARFNARKD 212 (214)
Q Consensus 199 ~~~Vp~dRf~rR~~ 212 (214)
+++ .||..
T Consensus 338 --~~~----~R~~~ 345 (358)
T 7E40_B 338 --QTP----NRAKR 345 (358)
T ss_dssp --HSH----HHHHH
T ss_pred --ccH----HHHHH
No 21
>6D9M_A Fusion protein of Endolysin,Response receiver sensor diguanylate cyclase, GAF domain-containing; Cyclic dinucleotide, GGDEF, HYDROLASE; HET: GMP, GTP; 1.35A {Enterobacteria phage T4}
Probab=91.66 E-value=2.7 Score=36.26 Aligned_cols=97 Identities=11% Similarity=0.143 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-
Q FD01845373_000 106 EQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC- 183 (214)
Q Consensus 106 ~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n- 183 (214)
...||++|-..|+..--..++..+++.+.. ...|++|++..++.+||+.|.-..+.-.... +..++..+
T Consensus 55 ~~~~t~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~al~~~~~n~g~~~~~~~~~~~~~l~~g~ 125 (337)
T 6D9M_A 55 NGVITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKR 125 (337)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHHHHHCTTT---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHccc---------CcchhcCCHHHHHHHHHHHHhcchhhhhccHHHHHHHHccC
Q ss_pred HHHHHHHHhcccchhccCCCchHHHHHHHhC
Q FD01845373_000 184 RQSFKNNISNTHWLTAFSVPRARFNARKDYL 214 (214)
Q Consensus 184 ~~~~~~~i~~~~W~~~~~Vp~dRf~rR~~yL 214 (214)
.......|....|. +....|..+....+
T Consensus 126 ~~~~~~~~~~~~~~---~~~~~r~~~~~~~~ 153 (337)
T 6D9M_A 126 WDEAAVNLAKSRWY---NQTPNRAKRVITTF 153 (337)
T ss_dssp HHHHHHHHTSSHHH---HHSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcchh---hcCcchHHHHHHHH
No 22
>6AJG_A Drug exporters of the RND superfamily-like protein,Endolysin; membrane protein, transporter, RND family, cell wall biosynthesis, drug target, HYDROLASE; HET: MHA, LMT, 3RX; 2.604A {Mycobacterium smegmatis str. MC2 155}
Probab=91.47 E-value=4.8 Score=42.03 Aligned_cols=116 Identities=14% Similarity=0.145 Sum_probs=0.0 Template_Neff=10.200
Q ss_pred cCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHH
Q FD01845373_000 38 GVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFL 117 (214)
Q Consensus 38 ~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~L 117 (214)
.....|||-|+.+................ + +....+ .||.+|-..|
T Consensus 783 ~~g~~tig~g~~l~~~~~~~~~~~~~~~~-----~-------------------------~~~~~~----~it~~ea~~l 828 (943)
T 6AJG_A 783 TEGYYTIGIGHLLTKSPSLNAAKSELDKA-----I-------------------------GRNTNG----VITKDEAEKL 828 (943)
T ss_dssp TTSCEEEETTEEEESCSCHHHHHHHHHHH-----H-------------------------TSCCTT----BCCHHHHHHH
T ss_pred CCCCeeEeeeeecCCCcchHHHHHHHHHH-----h-------------------------CCCCCC----CCCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeC-CCCCcccHHHHHHHHHhC-HHHHHHHHhccc
Q FD01845373_000 118 FKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFR-GDNSPRTRRYFINDLNEC-RQSFKNNISNTH 195 (214)
Q Consensus 118 F~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~Yr-GDyt~~tR~~iq~~~~~n-~~~~~~~i~~~~ 195 (214)
|..--...++.+.+.+.. ...|++|++.-++++||+.|. |-..-..-..+.+++.++ ..+-...|.+..
T Consensus 829 l~~d~~~~~~~~~~~~~~---------~~~~~~l~~~~~~alv~~~yn~G~~~~~~~~~~~~~l~~~d~~~a~~~~~~~~ 899 (943)
T 6AJG_A 829 FNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSR 899 (943)
T ss_dssp HHHHHHHHHHHHHHCTTT---------HHHHHHSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHTTCHHHHHHHHTTSH
T ss_pred HHHHHHHHHHHHHHHccc---------CcchHhCCHHHHHHHHHHHHhcCcchhhhhHHHHHHHHcCCHHHHHHHHHcCH
Q ss_pred c
Q FD01845373_000 196 W 196 (214)
Q Consensus 196 W 196 (214)
|
T Consensus 900 ~ 900 (943)
T 6AJG_A 900 W 900 (943)
T ss_dssp H
T ss_pred H
No 23
>7MWY_A STING; STING, cyclic dinucleotide receptor, IMMUNE SYSTEM; 1.84A {Drosophila eugracilis}
Probab=90.82 E-value=10 Score=35.08 Aligned_cols=122 Identities=13% Similarity=0.149 Sum_probs=0.0 Template_Neff=9.800
Q ss_pred cEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHH
Q FD01845373_000 42 VTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAV 121 (214)
Q Consensus 42 VTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~ 121 (214)
+|||.|+++...+.......-.... +. ..... .||.+|-..||...
T Consensus 27 ~tIG~G~~l~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~it~~~a~~ll~~~ 72 (356)
T 7MWY_A 27 YTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEKLFNQD 72 (356)
T ss_dssp EEEETTEECCSCSCHHHHHHHHHHH-----HS-------------------------SCCTT----BCCHHHHHHHHHHH
T ss_pred EEEEEEecCCCCcchhHHHHHHHHH-----hh-------------------------cccCC----CCCHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHHHHHHHhcccchhc
Q FD01845373_000 122 YKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQSFKNNISNTHWLTA 199 (214)
Q Consensus 122 Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~~~~~i~~~~W~~~ 199 (214)
...++..+.+.... ...|+.|++..++.++|+.|......-.. ..+..++..+ ..+....|....|.
T Consensus 73 l~~~~~~v~~~~~~---------~~~~~~l~~~~~~al~s~~yn~G~~~~~~~~~~~~~l~~gd~~~a~~~l~~~~~~-- 141 (356)
T 7MWY_A 73 VDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY-- 141 (356)
T ss_dssp HHHHHHHHHTCTTT---------HHHHHHSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHHTSHHH--
T ss_pred HHHHHHHHHHHccc---------ccchhcCCHHHHHHHHHHHhhcCcchhccCHHHHHHHHcCCHHHHHHHHHhcccc--
Q ss_pred cCCCchHHHH
Q FD01845373_000 200 FSVPRARFNA 209 (214)
Q Consensus 200 ~~Vp~dRf~r 209 (214)
+....|-++
T Consensus 142 -~~~~~R~~~ 150 (356)
T 7MWY_A 142 -NQTPNRAKR 150 (356)
T ss_dssp -HHSHHHHHH
T ss_pred -cCCchHHHH
No 24
>4N9N_B Sterol uptake control protein 2, Lysozyme; fungal nuclear receptor-like transcription factor, ergosterol binding, nucleus, TRANSCRIPTION; HET: MSE; 2.9A {Saccharomyces cerevisiae}
Probab=90.33 E-value=1.3 Score=43.83 Aligned_cols=84 Identities=13% Similarity=0.135 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred CCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHH
Q FD01845373_000 39 VSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLF 118 (214)
Q Consensus 39 ~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF 118 (214)
.+++|||=|+++...+..-. ++++.|+++...-+. .||..|-..+|
T Consensus 144 ~~~~t~~~g~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~-------~~t~~~~~~~~ 189 (438)
T 4N9N_B 144 EGYYTIGIGHLLTKSPSLNA---------------------------AKSELDKAIGRNTNG-------VITKDEAEKLF 189 (438)
T ss_dssp TSSBCCBTTCCCCCSSCSSS---------------------------STTTSCSSSSSCCTT-------CCCHHHHHHHH
T ss_pred CCCeEEeEeccCCCCccchh---------------------------hHHHHHHHhCCCCCC-------cCCHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeC
Q FD01845373_000 119 KAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFR 165 (214)
Q Consensus 119 ~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~Yr 165 (214)
+..-.+.+..+.+.+.+ ..+ ++.+++..+++++|+.|.
T Consensus 190 ~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~al~~~~~~ 227 (438)
T 4N9N_B 190 NQDVDAAVRGILRNAKL--------KPV-YDSLDAVRRAALINMVFQ 227 (438)
T ss_dssp HHHHHHHHHHHHHCTTT--------HHH-HHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccc--------ccc-hhcCCHHHHHHHHHHHHh
No 25
>6ZX9_C Vpr protein fused to T4 lysozyme; viral protein Vpr, viral hijacking of human ubiquitin ligase CRL4, DDB1, DCAF1, VIRAL PROTEIN; HET: GOL; 2.5197288426A {Homo sapiens}
Probab=90.30 E-value=16 Score=31.12 Aligned_cols=131 Identities=13% Similarity=0.119 Sum_probs=0.0 Template_Neff=11.100
Q ss_pred cCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHH
Q FD01845373_000 38 GVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFL 117 (214)
Q Consensus 38 ~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~L 117 (214)
.....|||.|+.+...... +.....+-.......+ ..||.+|-..|
T Consensus 20 ~~g~~tig~G~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~---~~~t~~~a~~l 65 (258)
T 6ZX9_C 20 TEGYYTIGIGHLLTKSPSL-------------------------------NAAKSELDKAIGRNTN---GVITKDEAEKL 65 (258)
T ss_dssp TTSCEEEETTEEEESSSCH-------------------------------HHHHHHHHHHSSSCCT---TBCCHHHHHHH
T ss_pred CCCCeEEEeeeeCCCChhh-------------------------------hhHHHHHHHHhccCCC---CCCCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHH-HHHHHHHhC-HHHHHHHHhccc
Q FD01845373_000 118 FKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRR-YFINDLNEC-RQSFKNNISNTH 195 (214)
Q Consensus 118 F~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~-~iq~~~~~n-~~~~~~~i~~~~ 195 (214)
+..-...++..+.+.+.. ...|+.|++..++.++|+.|......-... .+..++.++ ..+....|....
T Consensus 66 l~~~l~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~n~G~~~~~~~~~~~~~l~~gd~~~a~~~~~~~~ 136 (258)
T 6ZX9_C 66 FNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSR 136 (258)
T ss_dssp HHHHHHHHHHHHHTCTTT---------HHHHHTSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHTSSH
T ss_pred HHHHHHHHHHHHHHHccc---------chhHhhCCHHHHHHHHHHHhhCCcchhhcCHHHHHHHHcCCHHHHHHHHHhcc
Q ss_pred chhccCCCchHHHHHHHhC
Q FD01845373_000 196 WLTAFSVPRARFNARKDYL 214 (214)
Q Consensus 196 W~~~~~Vp~dRf~rR~~yL 214 (214)
|. .....|-+.-.+.+
T Consensus 137 ~~---~~~~~Rr~~~~~~~ 152 (258)
T 6ZX9_C 137 WY---NQTPNRAKRVITTF 152 (258)
T ss_dssp HH---HHSHHHHHHHHHHH
T ss_pred cc---cCCchHHHHHHHHH
No 26
>6A9J_A Endolysin,Autophagy-related protein 2; LIPID TRANSPORT; HET: PEE; 2.7A {Enterobacteria phage RB59}
Probab=89.99 E-value=13 Score=34.30 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=0.0 Template_Neff=10.600
Q ss_pred cEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHH
Q FD01845373_000 42 VTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAV 121 (214)
Q Consensus 42 VTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~ 121 (214)
.|||.|+.+...... .+..+...-........ .||.+|-..||...
T Consensus 25 ~tig~G~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~----~~t~~~a~~ll~~~ 70 (389)
T 6A9J_A 25 YTIGIGHLLTKSPSL------------------------------NAAKSELDKAIGRNTNG----VITKDEAEKLFNQD 70 (389)
T ss_dssp EEETTTEEEESSCCH------------------------------HHHHHHHHHHHSSCCSS----CCCHHHHHHHHHHH
T ss_pred eEEEeeecCCCCcch------------------------------HhHHHHHHHHhcccCCC----CCCHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHHHHHHHhcccchhc
Q FD01845373_000 122 YKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQSFKNNISNTHWLTA 199 (214)
Q Consensus 122 Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~~~~~i~~~~W~~~ 199 (214)
...++..+.+.+.. .-.|+.|++..+++++|+.|......-.+ ..+..++.++ ..+..+.|.+..|.
T Consensus 71 ~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~yn~G~~~~~~~~~~~~~l~~gd~~~a~~~~~~~~~~-- 139 (389)
T 6A9J_A 71 VDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY-- 139 (389)
T ss_dssp HHHHHHHHHHCTTH---------HHHHHTCCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHTTCHHHHHHHHTSSHHH--
T ss_pred HHHHHHHHHHHccc---------chhHHcCCHHHHHHHHHHHhhcCcchhhcCHHHHHHHHcCCHHHHHHHHHhchhh--
Q ss_pred cCCCchHHHHHHHhC
Q FD01845373_000 200 FSVPRARFNARKDYL 214 (214)
Q Consensus 200 ~~Vp~dRf~rR~~yL 214 (214)
.....|-++..+.+
T Consensus 140 -~~~~~r~~~~~~~~ 153 (389)
T 6A9J_A 140 -NQTPNRAKRVITTF 153 (389)
T ss_dssp -HHCHHHHHHHHHHH
T ss_pred -hcChHHHHHHHHHH
No 27
>6XMV_A Hemolysin,Endolysin; BON domain, lipoprotein, T4 lysozyme, PROTEIN TRANSPORT; 2.75A {Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)}
Probab=89.60 E-value=21 Score=31.37 Aligned_cols=139 Identities=12% Similarity=0.105 Sum_probs=0.0 Template_Neff=11.600
Q ss_pred CcCCcCCCCCCccccCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCC
Q FD01845373_000 24 SRRPHVPNNNGAVIGVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVP 103 (214)
Q Consensus 24 SR~~H~P~~~~~v~~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~ 103 (214)
.+....+... ..+|||.|+++...+..........-. +. .....
T Consensus 190 ~~~~~y~~~~------~~~~ig~g~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~ 233 (339)
T 6XMV_A 190 LRLKIYKDTE------GYYTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG 233 (339)
T ss_dssp CEEEEEECTT------SCEEEETTEEEESSSCHHHHHHHHHHH-----HC-------------------------SCCTT
T ss_pred CeeeeeeCCC------CCeEEEEEecCCCChhhhHHHHHHHHH-----hc-------------------------cccCC
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCc-ccHHHHHHHHHh
Q FD01845373_000 104 KNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSP-RTRRYFINDLNE 182 (214)
Q Consensus 104 ~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~-~tR~~iq~~~~~ 182 (214)
.+|..+-..||......+...+.+.... .-.|+.|+..-+++++|+.|.....+ ..-..+..++.+
T Consensus 234 ----~~t~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~al~~~~y~~g~~~~~~~~~~~~~l~~ 300 (339)
T 6XMV_A 234 ----VITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQ 300 (339)
T ss_dssp ----BCCHHHHHHHHHHHHHHHHHHHHHSTTT---------HHHHHTSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHT
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHHHHccc---------chhHHhCCHHHHHHHHHHHhcCCcchhhcCHHHHHHHHc
Q ss_pred C-HHHHHHHHhcccchhccCCCchHHHHHHHhC
Q FD01845373_000 183 C-RQSFKNNISNTHWLTAFSVPRARFNARKDYL 214 (214)
Q Consensus 183 n-~~~~~~~i~~~~W~~~~~Vp~dRf~rR~~yL 214 (214)
+ ..+....|....|. .-...|-+...+.+
T Consensus 301 ~~~~~~~~~~~~~~~~---~~~~~r~~~~~~~~ 330 (339)
T 6XMV_A 301 KRWDEAAVNLAKSRWY---NQTPNRAKRVITTF 330 (339)
T ss_dssp TCHHHHHHHHTTSHHH---HHSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhchhh---hcChHHHHHHHHHH
No 28
>7CN7_A Baseplate central spike complex protein gp5; Lysozyme inhibitor complex, Phage, Lysis inhibition, VIRAL PROTEIN; HET: 1PG, EDO; 1.15A {Enterobacteria phage T4} SCOP: d.2.1.0
Probab=88.73 E-value=14 Score=28.36 Aligned_cols=118 Identities=10% Similarity=0.025 Sum_probs=0.0 Template_Neff=12.300
Q ss_pred cCCCCCCccccCCccEeCccccCCCCCHHHHHHHHHHh----hhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCC
Q FD01845373_000 28 HVPNNNGAVIGVSGVTFGRGLDLGQQTETYINSLFQEM----EKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVP 103 (214)
Q Consensus 28 H~P~~~~~v~~~SGVTIGRGYDmg~rs~~~i~~dL~~a----G~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~ 103 (214)
+.+... +.+|||-|+.+............... +..+.+ .-.
T Consensus 29 ~~~~~~------~~~tig~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~ 73 (181)
T 7CN7_A 29 VYWDTE------GYPTIGIGHLIMKQPVRDMAQINKVLSKQVGREITG-----------------------------NPG 73 (181)
T ss_dssp EEECTT------SCEEEETTEESCSSCCCCHHHHHHHHHHHHTSCCCT-----------------------------TTT
T ss_pred eEECCC------CCeEEeeecccCCCccccHHHHHHHHHhhcCCccCC-----------------------------CCC
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHh
Q FD01845373_000 104 KNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNE 182 (214)
Q Consensus 104 ~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~ 182 (214)
.+|.++-..||......+...+++.... .-.|..|+...++.++++.|..-...... ..+...+..
T Consensus 74 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~ 140 (181)
T 7CN7_A 74 ----SITMEEATTLFERDLADMQRDIKSHSKV---------GPVWQAVNRSRQMALENMAFQMGVGGVAKFNTMLTAMLA 140 (181)
T ss_dssp ----BCCHHHHHHHHHHHHHHHHHHHHHSTTH---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHT
T ss_pred ----ccCHHHHHHHHHHHHHHHHHHHHHHhcc---------ChhHHhCCHHHHHHHHHHHHhcChhhHHhhHHHHHHHHc
Q ss_pred C-HHHHHHHHhc
Q FD01845373_000 183 C-RQSFKNNISN 193 (214)
Q Consensus 183 n-~~~~~~~i~~ 193 (214)
+ ..+....|.+
T Consensus 141 ~~~~~~~~~~~~ 152 (181)
T 7CN7_A 141 GDWEKAYKAGRD 152 (181)
T ss_dssp TCHHHHHHHHHS
T ss_pred CCHHHHHHHHHh
No 29
>6WSK_A Endolysin,CB1 cannabinoid receptor-interacting protein 1 fusion; beta barrel, cargo carrier, SIGNALING PROTEIN; 1.55A {Enterobacteria phage T4}
Probab=88.57 E-value=27 Score=32.61 Aligned_cols=129 Identities=12% Similarity=0.106 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred cCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHH
Q FD01845373_000 38 GVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFL 117 (214)
Q Consensus 38 ~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~L 117 (214)
....+|||.|+.+...........-.... +. ..... .||.++-..|
T Consensus 39 ~~g~~TiG~G~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~it~~~a~~l 84 (346)
T 6WSK_A 39 TEGYYTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEKL 84 (346)
T ss_dssp ----CEEEETEEC----------------------------------------------------C----BCCHHHHHHH
T ss_pred CCCCEEEEEEecCCCChhhHHHHHHHHHH-----hc-------------------------ccCCC----ccCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHHHHHHHhccc
Q FD01845373_000 118 FKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQSFKNNISNTH 195 (214)
Q Consensus 118 F~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~~~~~i~~~~ 195 (214)
+..-...++..+.+.+.. .-.|+.|++..++.++|+.|......-.. ..+..++.++ ..+....+....
T Consensus 85 l~~~l~~~~~~v~~~~~~---------~~~~~~l~~~~~~alvs~~yn~G~~~~~~~~~~~~~l~~gd~~~a~~~~~~~~ 155 (346)
T 6WSK_A 85 FNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSI 155 (346)
T ss_dssp HHHHHHHHHHHHHHCTTT---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHccc---------chhHHhCCHHHHHHHHHHHHhCCcchhccCHHHHHHHHcCCHHHHHHHHHhcc
Q ss_pred chhccCCCchHHHHHHH
Q FD01845373_000 196 WLTAFSVPRARFNARKD 212 (214)
Q Consensus 196 W~~~~~Vp~dRf~rR~~ 212 (214)
|. .-...|-++-.+
T Consensus 156 ~~---~~~~~Rr~~~~~ 169 (346)
T 6WSK_A 156 WY---NQTPNRAKRVIT 169 (346)
T ss_dssp HH---HHSHHHHHHHHH
T ss_pred cc---cCChhHHHHHHH
No 30
>6VMS_R Endolysin,D(2) dopamine receptor,D(2) dopamine receptor; Dopamine, Dopamine receptor, GPCR, G protein, Parkinson's disease, SIGNALING PROTEIN; HET: 08Y; 3.8A {Rattus norvegicus}
Probab=87.13 E-value=17 Score=32.24 Aligned_cols=116 Identities=13% Similarity=0.125 Sum_probs=0.0 Template_Neff=12.600
Q ss_pred cCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHH
Q FD01845373_000 38 GVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFL 117 (214)
Q Consensus 38 ~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~L 117 (214)
.....|||-|+.+......+....-..+. .. ..... .||.+|+..|
T Consensus 28 ~~g~~tig~g~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~~t~~~~~~l 73 (450)
T 6VMS_R 28 TEGYYTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEKL 73 (450)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCceEEeeeceeccCCchHHHHHHHHHH-----hh-------------------------hhcCC----CCCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHHHHHhccc
Q FD01845373_000 118 FKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFKNNISNTH 195 (214)
Q Consensus 118 F~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~~~i~~~~ 195 (214)
+...-...+..+.+..+. ...|+.+++.-+|.++|+.|...-.+....- +...+.++ .......+.+..
T Consensus 74 l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (450)
T 6VMS_R 74 FNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSR 144 (450)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhhhhc---------cccccCCCHHHHHHHHhhhccCCccccccchhHHHHHhccCHHHHHHHHhhcc
Q ss_pred c
Q FD01845373_000 196 W 196 (214)
Q Consensus 196 W 196 (214)
|
T Consensus 145 ~ 145 (450)
T 6VMS_R 145 W 145 (450)
T ss_dssp -
T ss_pred c
No 31
>6XYR_A T4Lnano,Endolysin,Calmodulin,Endolysin,Calmodulin-1; Fusion protein, crystal engineering, rigid helix, molecular biomimetics, STRUCTURAL PROTEIN; HET: GOL; 2.079A {Homo sapiens}
Probab=86.27 E-value=15 Score=32.04 Aligned_cols=131 Identities=11% Similarity=0.064 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred cCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHH
Q FD01845373_000 38 GVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFL 117 (214)
Q Consensus 38 ~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~L 117 (214)
....+|||-|+.+.......+...+..-+.....- . .||.+|...|
T Consensus 56 ~~g~~tig~G~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~----~~t~~~~~~~ 101 (361)
T 6XYR_A 56 TEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCN------------------------------G----VITKDEAEKL 101 (361)
T ss_dssp TTSCEEEETTEEEESSSCHHHHHHHHHHHHTSCCT------------------------------T----BCCHHHHHHH
T ss_pred CCCCeEEeeeeccCCCcccccchhhhhhhccCCcC------------------------------c----ccCHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHHHHHhccc
Q FD01845373_000 118 FKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFKNNISNTH 195 (214)
Q Consensus 118 F~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~~~i~~~~ 195 (214)
|...-..++..+.+.+.. ...|..|++.-.+.++|+.|.-....-.... +.+.+..+ ..+....+....
T Consensus 102 l~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~n~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (361)
T 6XYR_A 102 FNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSR 172 (361)
T ss_dssp HHHHHHHHHHHHHHCTTT---------HHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHHHHHHTTSH
T ss_pred HhhhHHHHHHHHHHHccc---------cccchhcHHHHHHHHHHHHHHhhhhcccchHHHHHHHhhcCHHHHHHHHHhcc
Q ss_pred chhccCCCchHHHHHHHhC
Q FD01845373_000 196 WLTAFSVPRARFNARKDYL 214 (214)
Q Consensus 196 W~~~~~Vp~dRf~rR~~yL 214 (214)
|. .-...|-..+...+
T Consensus 173 ~~---~~~~~r~~~~~~~~ 188 (361)
T 6XYR_A 173 WY---NQTPNRAKRVITTF 188 (361)
T ss_dssp HH---HHSHHHHHHHHHHH
T ss_pred cc---ccCcchhhHhHHhh
No 32
>7EVY_D Sphingosine 1-phosphate receptor 1; Homo sapiens, MEMBRANE PROTEIN; HET: NAG, J8C;{Homo sapiens}
Probab=85.48 E-value=18 Score=33.66 Aligned_cols=94 Identities=11% Similarity=0.132 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HH
Q FD01845373_000 108 LLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQ 185 (214)
Q Consensus 108 eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~ 185 (214)
.||.+|-..||..-.+.++..+++.... ...|..|++.-++.++|+.|......-.+.. +.+.+.++ ..
T Consensus 80 ~it~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~al~~~~yn~G~~~~~~~~~~~~~~~~~~~~ 150 (531)
T 7EVY_D 80 VITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWD 150 (531)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHcCC---------CccHHhCCHHHHHHHHHHHHhcCccchhhcHHHHHHHHcCCHH
Q ss_pred HHHHHHhcc-cchhccCCCchHHHHHHHh
Q FD01845373_000 186 SFKNNISNT-HWLTAFSVPRARFNARKDY 213 (214)
Q Consensus 186 ~~~~~i~~~-~W~~~~~Vp~dRf~rR~~y 213 (214)
+....+... .+. ..+..+......+
T Consensus 151 ~~~~~~~~~~~~~---~~~~~~~~~~~~~ 176 (531)
T 7EVY_D 151 EAAVNLAKSRWYN---QTPNRAKRVITTF 176 (531)
T ss_dssp -----------------------------
T ss_pred HHHHHHHhccccc---CCCcHHHHHHHHH
No 33
>4WTV_B Phosphatidylinositol 4-kinase type 2-beta,Endolysin,Phosphatidylinositol 4-kinase type 2-beta; lipid kinase, phosphatidyl inositol, transferase, hydrolase; HET: ATP; 1.9A {Homo sapiens}
Probab=84.85 E-value=21 Score=35.17 Aligned_cols=121 Identities=15% Similarity=0.178 Sum_probs=0.0 Template_Neff=9.500
Q ss_pred EeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHH
Q FD01845373_000 43 TFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVY 122 (214)
Q Consensus 43 TIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y 122 (214)
|||.|+.+...... +......-........ ..||.+|...|+....
T Consensus 101 TiG~G~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~---~~it~~~a~~ll~~di 146 (514)
T 4WTV_B 101 TIGIGHLLTKSPSL-------------------------------NAAKSELDKAIGRNTN---GVITKDEAEKLFNQDV 146 (514)
T ss_dssp ECSSSCC-----------------------------------------------------------CCHHHHHHHHHHHH
T ss_pred EEEEEEEecCChhh-------------------------------hhHHHHHHHHhhccCC---CccCHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHHHHHHHhcccchhcc
Q FD01845373_000 123 KHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQSFKNNISNTHWLTAF 200 (214)
Q Consensus 123 ~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~~~~~i~~~~W~~~~ 200 (214)
..++..+.+.+.. .-.|+.|++..++.|||+.|..-...-.. ..+..++.++ ..+....|....|.
T Consensus 147 ~~~~~~v~~~~~~---------~~~~~~l~~~~~~ALvs~~yn~G~~~~~~~~~~~~~l~~gd~~~a~~~l~~~~~~--- 214 (514)
T 4WTV_B 147 DAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY--- 214 (514)
T ss_dssp HHHHHHHHTCTTH---------HHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHHHHHHHTSHHH---
T ss_pred HHHHHHHHHHccc---------CcccccCCHHHHHHHHHHHHhcCchhhccCcHHHHHHHCCCHHHHHHHHHHhccc---
Q ss_pred CCCchHHHHHHH
Q FD01845373_000 201 SVPRARFNARKD 212 (214)
Q Consensus 201 ~Vp~dRf~rR~~ 212 (214)
+-.. .||..
T Consensus 215 ~~~~---~Rr~~ 223 (514)
T 4WTV_B 215 NQTP---NRAKR 223 (514)
T ss_dssp HHSH---HHHHH
T ss_pred cCCh---hHHHH
No 34
>4YX7_C Oxygen-regulated invasion protein OrgB,Endolysin; Type III Secretion System, PROTEIN TRANSPORT; 2.0007A {Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)}
Probab=81.79 E-value=38 Score=27.05 Aligned_cols=115 Identities=13% Similarity=0.139 Sum_probs=0.0 Template_Neff=11.700
Q ss_pred CCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHH
Q FD01845373_000 39 VSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLF 118 (214)
Q Consensus 39 ~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF 118 (214)
.+.+|||.|+++................ +. ..... .+|.++-..|+
T Consensus 55 ~~~~~~g~g~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~~~~~~~~~~~ 100 (197)
T 4YX7_C 55 EGYYTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEKLF 100 (197)
T ss_dssp SCCEEEETTEEEESSSCHHHHHHHHHHH-----HS-------------------------SCCSS----BCCHHHHHHHH
T ss_pred CCCeEEEeEecCCCChhhHHHHHHHHHH-----hc-------------------------cCCCC----CcCHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHHHHHHHhcccc
Q FD01845373_000 119 KAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQSFKNNISNTHW 196 (214)
Q Consensus 119 ~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~~~~~i~~~~W 196 (214)
......+...+.+.+.. .-.|+.|+...++.++|+.|......... ..+..++..+ ..+....+.+..|
T Consensus 101 ~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (197)
T 4YX7_C 101 NQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRW 171 (197)
T ss_dssp HHHHHHHHHHHHHCTTH---------HHHHHHSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHTTSHH
T ss_pred HHHHHHHHHHHHHHccc---------chhHHhCCHHHHHHHHHHHhhCCcchhccCHHHHHHHHcCCHHHHHHHHHhcHH
No 35
>1WTH_A Tail-associated lysozyme; Triple-stranded beta-helix, OB fold, pseudohexamer, T4 tail lysozyme, HUB, gp5-gp27, Hydrolase-Structural protein COMPLEX; 2.8A {Enterobacteria phage T4}
Probab=78.14 E-value=25 Score=35.38 Aligned_cols=98 Identities=11% Similarity=0.085 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC
Q FD01845373_000 105 NEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC 183 (214)
Q Consensus 105 ~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n 183 (214)
....||..|-..||...-..+...+.+.+.. .-.|..|++.++++++|+.|+........ ..+..++..+
T Consensus 232 ~~~~it~~~~~~~l~~~i~~~~~~v~~~~~~---------~~~~~~l~~~~~~al~~~~yn~G~g~~~~~~~~~~~l~~g 302 (584)
T 1WTH_A 232 NPGSITMEEATTLFERDLADMQRDIKSHSKV---------GPVWQAVNRSRQMALENMAFQMGVGGVAKFNTMLTAMLAG 302 (584)
T ss_dssp TTTBCCHHHHHHHHHHHHHHHHHHHHTCTTH---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTT
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHhhccc---------chhHHhCCHHHHHHHHHHHHHccchhHHhhHHHHHHHHcC
Q ss_pred -HHHHHHHHhcccchhccCCCchHHHHHHHhC
Q FD01845373_000 184 -RQSFKNNISNTHWLTAFSVPRARFNARKDYL 214 (214)
Q Consensus 184 -~~~~~~~i~~~~W~~~~~Vp~dRf~rR~~yL 214 (214)
..+....|.+..|. .-...|..+...++
T Consensus 303 ~~~~~~~~l~~~~~~---~~~~~R~~~~a~~~ 331 (584)
T 1WTH_A 303 DWEKAYKAGRDSLWY---QQTKGRASRVTMII 331 (584)
T ss_dssp CHHHHHHHHTTSHHH---HTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhh---hccccHHHHHHHHH
No 36
>7LOG_A Lysozyme; mutant, lysozyme, small molecule, L99A, complex, PROTEIN BINDING, HYDROLASE; HET: Y8J; 0.99A {Enterobacteria phage T4}
Probab=76.00 E-value=52 Score=25.41 Aligned_cols=82 Identities=11% Similarity=0.159 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-H
Q FD01845373_000 107 QLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-R 184 (214)
Q Consensus 107 ~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~ 184 (214)
..+|..+-..||......+...+++.... .-.|+.|+...+++++|+.|......-.. ..+..++..+ .
T Consensus 56 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 126 (172)
T 7LOG_A 56 GVITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRCAAINMVFQMGETGVAGFTNSLRMLQQKRW 126 (172)
T ss_dssp TBCCHHHHHHHHHHHHHHHHHHHHHCTTH---------HHHHHHSCHHHHHHHHHHHHHHHHHHTGGGHHHHHHHHTTCH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHccc---------cchHHhCCHHHHHHHHHHHHhCCcchhccCHHHHHHHHcCCH
Q ss_pred HHHHHHHhcccch
Q FD01845373_000 185 QSFKNNISNTHWL 197 (214)
Q Consensus 185 ~~~~~~i~~~~W~ 197 (214)
......|.+..|.
T Consensus 127 ~~~~~~~~~~~~~ 139 (172)
T 7LOG_A 127 DEAAVNLAKSRWY 139 (172)
T ss_dssp HHHHHHHHSSHHH
T ss_pred HHHHHHHHcCHHH
No 37
>4EPI_A Pesticin, Lysozyme Chimera; bacterial toxin, TOXIN, HYDROLASE; 1.74A {Yersinia pestis}
Probab=75.56 E-value=49 Score=31.40 Aligned_cols=97 Identities=11% Similarity=0.145 Sum_probs=0.0 Template_Neff=8.500
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-
Q FD01845373_000 106 EQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC- 183 (214)
Q Consensus 106 ~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n- 183 (214)
...||.+|-..||......++..+...+.. ...|+.|++..++.++|+.|.--...... ..+..++.++
T Consensus 221 ~~~it~~ea~~ll~~~l~~~~~~v~~~~~~---------~~~~~~l~~~~~~ALvs~ayN~G~~~~~~~s~~~~~i~~gd 291 (330)
T 4EPI_A 221 NGVITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKR 291 (330)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHHHHTCTTT---------HHHHHHCCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHcCC---------CcchhhCCHHHHHHHHHHHHhcCcchhccchHHHHHHHCCC
Q ss_pred HHHHHHHHhcccchhccCCCchHHHHHHHhC
Q FD01845373_000 184 RQSFKNNISNTHWLTAFSVPRARFNARKDYL 214 (214)
Q Consensus 184 ~~~~~~~i~~~~W~~~~~Vp~dRf~rR~~yL 214 (214)
..+....|.+..|. .-...|-++-.+.+
T Consensus 292 ~~~aa~el~~~~~~---~~~~~Rr~~ea~~~ 319 (330)
T 4EPI_A 292 WDEAAVNLAKSRWY---NQTPNRAKRVITTF 319 (330)
T ss_dssp HHHHHHHHTTSHHH---HHSHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccc---CCChHHHHHHHHHH
No 38
>8THL_R Endolysin,Alpha-1A adrenergic receptor; Alpha-1A-adrenergic receptor, Epinephrine, SIGNALING PROTEIN; HET: ALE;{Homo sapiens}
Probab=74.90 E-value=33 Score=31.76 Aligned_cols=79 Identities=13% Similarity=0.181 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQS 186 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~ 186 (214)
||.+|...||..-.+.+++.+++.... ...|..|++...+.++|+.|.-...+-.... +...+.++ ...
T Consensus 81 it~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~al~~~~~n~G~~~~~~~s~~~~~~~~~~~~~ 151 (503)
T 8THL_R 81 ITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDE 151 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHccc---------ccchhcCCHHHHHHHHHHHHhcccccccccHHHHHHHhhccHHH
Q ss_pred HHHHHhcccc
Q FD01845373_000 187 FKNNISNTHW 196 (214)
Q Consensus 187 ~~~~i~~~~W 196 (214)
....+....|
T Consensus 152 ~~~~~~~~~~ 161 (503)
T 8THL_R 152 AAVNLAKSRW 161 (503)
T ss_dssp ----------
T ss_pred HHHHHHhhcc
No 39
>4XES_A Neurotensin receptor type 1, Endolysin chimera; membrane protein, G protein-coupled receptor, GPCR, neurotensin receptor, NTSR1, SIGNALING PROTEIN, HYDROLASE; HET: CIT, EPE, GOL, PEG; 2.6A {Rattus norvegicus}
Probab=67.82 E-value=76 Score=29.18 Aligned_cols=94 Identities=13% Similarity=0.174 Sum_probs=0.0 Template_Neff=12.600
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHh
Q FD01845373_000 104 KNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNE 182 (214)
Q Consensus 104 ~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~ 182 (214)
.....++.++...++...-..+++.+.+.... ...|..|++.-+|.+||+.|.-.-..-.... +.+.+.+
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~n~g~~~~~~~~~~~~~~~~ 499 (541)
T 4XES_A 429 NTNGVITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLNN 499 (541)
T ss_dssp CCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTT---------HHHHHTSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHT
T ss_pred ccccCCCHHHHHHHHHhcHHHHHHHHHHHccC---------CcccccCCHHHHHHHHHHHHhcCcccchhHHHHHHHHHc
Q ss_pred C-HHHHHHHHhcccchhccCCCchHHHH
Q FD01845373_000 183 C-RQSFKNNISNTHWLTAFSVPRARFNA 209 (214)
Q Consensus 183 n-~~~~~~~i~~~~W~~~~~Vp~dRf~r 209 (214)
+ ..+....|....|. +-+..|..+
T Consensus 500 ~~~~~~~~~~~~~~~~---~~~~~~~~~ 524 (541)
T 4XES_A 500 KRWDEAAVNLAKSRWY---NQTPNRAKR 524 (541)
T ss_dssp TCHHHHHHHHTTSHHH---HHSHHHHHH
T ss_pred CCHHHHHHHHHHhhhh---hcCHHHHHH
No 40
>7RX9_A Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein, Endolysin chimera; P-Rex1, P-Rex2, GEF, cell growth, Rac1, Cdc42, SIGNALING PROTEIN; HET: SO4; 3.22A {Homo sapiens}
Probab=64.52 E-value=83 Score=30.26 Aligned_cols=89 Identities=13% Similarity=0.160 Sum_probs=0.0 Template_Neff=11.700
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCccc-HHHHHHHHHhC-HHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRT-RRYFINDLNEC-RQS 186 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~t-R~~iq~~~~~n-~~~ 186 (214)
||.+|-..||+..-...+..+.+.... ...|+.|++..++.+||+.|..--.+-. ...+...+.++ ..+
T Consensus 323 ~t~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~~n~g~~~~~~~~~~~~~l~~~~~~~ 393 (606)
T 7RX9_A 323 ITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDE 393 (606)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhccc---------hhHHhcCCHHHHHHHHHHHHHcCcchhhHHHHHHHHHHhcCHHH
Q ss_pred HHHHHhcccchhccCCCchHHHHHHH
Q FD01845373_000 187 FKNNISNTHWLTAFSVPRARFNARKD 212 (214)
Q Consensus 187 ~~~~i~~~~W~~~~~Vp~dRf~rR~~ 212 (214)
-...|....|. +-.. .||..
T Consensus 394 ~~~~~~~~~~~---~~~~---~rr~~ 413 (606)
T 7RX9_A 394 AAVNLAKSIWY---NQTP---NRAKR 413 (606)
T ss_dssp --------------------------
T ss_pred HHHHHHHhhcc---ccCh---HHHHH
No 41
>2QB0_B TELSAM domain - Lysozyme chimera; Helical polymer, HYDROLASE REGULATOR; 2.56A {Escherichia coli}
Probab=64.09 E-value=1e+02 Score=25.30 Aligned_cols=79 Identities=13% Similarity=0.171 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQS 186 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~ 186 (214)
||.++-..||......++..+++.... .-.|+.|++..++.++|+.|......... ..+..++..+ ..+
T Consensus 137 ~s~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 207 (241)
T 2QB0_B 137 ITKDEAEKLFCQDVDAAVRGILRNAKL---------KPVYDSLDCVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDE 207 (241)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHTCTTT---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHH
T ss_pred cCHHHHHHHHHHhHHHHHHHHHHhccc---------chhHHhCCHHHHHHHHHHHHhCCcchhccCHHHHHHHHcCCHHH
Q ss_pred HHHHHhcccc
Q FD01845373_000 187 FKNNISNTHW 196 (214)
Q Consensus 187 ~~~~i~~~~W 196 (214)
....+.+..|
T Consensus 208 ~~~~~~~~~~ 217 (241)
T 2QB0_B 208 AAVNLAKSRW 217 (241)
T ss_dssp HHHHHTTSHH
T ss_pred HHHHHHhChH
No 42
>4IAP_B Oxysterol-binding protein homolog 3,Endolysin,Oxysterol-binding protein homolog 3; PH domain, beta sandwitch, targeting, phosphoinositides, LIPID BINDING PROTEIN- HYDRORASE complex; HET: SO4; 2.3A {Saccharomyces cerevisiae}
Probab=63.78 E-value=1.2e+02 Score=24.67 Aligned_cols=89 Identities=12% Similarity=0.177 Sum_probs=0.0 Template_Neff=12.600
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQS 186 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~ 186 (214)
||.++-..|+......++..++..+.. ...|+.|+...++.++|+.|..-..+-.. ..+...+... ..+
T Consensus 76 ~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 146 (260)
T 4IAP_B 76 ITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDE 146 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTCTTT---------HHHHHHSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHccc---------chhHhcCCHHHHHHHHHHHHhcCHhHHhhcHHHHHHHHcCCHHH
Q ss_pred HHHHHhcccchhccCCCchHHHH
Q FD01845373_000 187 FKNNISNTHWLTAFSVPRARFNA 209 (214)
Q Consensus 187 ~~~~i~~~~W~~~~~Vp~dRf~r 209 (214)
....|....|. .-...|-.+
T Consensus 147 ~~~~~~~~~~~---~~~~~r~~~ 166 (260)
T 4IAP_B 147 AAVNLAKSRWY---NQTPNRAKR 166 (260)
T ss_dssp HHHHHTSSHHH---HHSHHHHHH
T ss_pred HHHHHHcCcch---hcChhHHHH
No 43
>6LB8_C Endolysin,Calcium uptake protein 1, mitochondrial; Calcium binding protein, Mitochondrial, Uniporter, EF-hand, METAL BINDING PROTEIN; 3.283A {Escherichia virus T4}
Probab=61.92 E-value=96 Score=29.40 Aligned_cols=79 Identities=13% Similarity=0.181 Sum_probs=0.0 Template_Neff=11.500
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQS 186 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~ 186 (214)
||.++-..||...+..++..+.+.+.. .-.|+.|++..++.++|+.|.-......+.. +..++.++ ..+
T Consensus 66 ~t~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~n~G~~~~~~~~~~~~~~~~~d~~~ 136 (527)
T 6LB8_C 66 ITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDE 136 (527)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSTTH---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHccc---------chhHHhCCHHHHHHHHHHHhcCCcchhhccHHHHHHHHcCCHHH
Q ss_pred HHHHHhcccc
Q FD01845373_000 187 FKNNISNTHW 196 (214)
Q Consensus 187 ~~~~i~~~~W 196 (214)
....|....|
T Consensus 137 ~~~~~~~~~~ 146 (527)
T 6LB8_C 137 AAVNLAKSRW 146 (527)
T ss_dssp HHHHHTTSHH
T ss_pred HHHHHHhcCc
No 44
>8GTI_B Endolysin; MEMBRANE PROTEIN; HET: 0JS, OLA; 2.2A {Homo sapiens}
Probab=61.13 E-value=97 Score=22.70 Aligned_cols=79 Identities=13% Similarity=0.199 Sum_probs=0.0 Template_Neff=12.900
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQS 186 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~ 186 (214)
+|.++-..||......+...+.+.... .-.|+.|++..++.++++.|......-.. ..+...+..+ ...
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 127 (160)
T 8GTI_B 57 ITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRSALINMVFQMGETGVAGFTNSLRMLQQKRWDE 127 (160)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTCTTT---------HHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHccc---------chhHHcCCHHHHHHHHHHHHhcChhhhhcCHHHHHHHHcCCHHH
Q ss_pred HHHHHhcccc
Q FD01845373_000 187 FKNNISNTHW 196 (214)
Q Consensus 187 ~~~~i~~~~W 196 (214)
....+....|
T Consensus 128 ~~~~~~~~~~ 137 (160)
T 8GTI_B 128 AAVNLAKSRW 137 (160)
T ss_dssp HHHHHHSSHH
T ss_pred HHHHHHcCHH
No 45
>4E97_B Lysozyme; Hydrolase, Alkylation with 2-mercaptoethanol; HET: SO4, BME; 1.3A {Enterobacteria phage T4} SCOP: d.2.1.3, l.1.1.1
Probab=57.62 E-value=1.5e+02 Score=23.67 Aligned_cols=80 Identities=11% Similarity=0.139 Sum_probs=0.0 Template_Neff=11.500
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQS 186 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~ 186 (214)
+|..+-..||......+...+.+.+.. .-.|+.|+...++.++|+.|......-.. ..+...+..+ ..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 151 (187)
T 4E97_B 81 ITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRCAAINHVFQMGVTGVAGFTNVLRMLQQKRWDE 151 (187)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTCTTH---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHccc---------chhHhhCCHHHHHHHHHHHHcCChhhhcccHHHHHHHhcCCHHH
Q ss_pred HHHHHhcccch
Q FD01845373_000 187 FKNNISNTHWL 197 (214)
Q Consensus 187 ~~~~i~~~~W~ 197 (214)
....+....|.
T Consensus 152 ~~~~~~~~~~~ 162 (187)
T 4E97_B 152 AAVNLAKSRWY 162 (187)
T ss_dssp HHHHHTTSHHH
T ss_pred HHHHHHcCchh
No 46
>PF11508.12 ; DUF3218 ; Protein of unknown function (DUF3218)
Probab=57.50 E-value=25 Score=32.44 Aligned_cols=49 Identities=24% Similarity=0.386 Sum_probs=0.0 Template_Neff=1.900
Q ss_pred CCCCCccccCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCC
Q FD01845373_000 30 PNNNGAVIGVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQ 87 (214)
Q Consensus 30 P~~~~~v~~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~ 87 (214)
|...|.....||++++-|..|+..+.. .+.+.. +|++.-..+..+.|+.
T Consensus 132 ~~sgG~~~q~SGl~VsYGvnl~~Lt~~----q~~aMn-----LP~diK~LvtpGVGl~ 180 (213)
T Q9I1P7_PSEAE/3 132 TDASGGISQESGLLVSYGVNLRTLTPG----TWQAMT-----LPEDIKALVGPGVGLR 180 (213)
T ss_pred ccCCCCcccccceEEEeeeeccCCChh----hhHhcC-----CChHHHHHHcCCCccc
No 47
>2O7A_A Lysozyme; Protein folding, protein stability, lysozyme, circular permutant, HYDROLASE; HET: SME; 0.84A {Enterobacteria phage T4}
Probab=56.06 E-value=1.4e+02 Score=22.83 Aligned_cols=87 Identities=13% Similarity=0.136 Sum_probs=0.0 Template_Neff=10.500
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcc-cHHHHHHHHHhC-HHHH
Q FD01845373_000 110 TRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPR-TRRYFINDLNEC-RQSF 187 (214)
Q Consensus 110 T~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~-tR~~iq~~~~~n-~~~~ 187 (214)
|.++=..||......++..+++.+.. ...|+.|++..+++++|+.|.-.-... ....+...+... ..+.
T Consensus 1 t~~~a~~ll~~~l~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~s~~~n~G~~~~~~~~~~~~~~~~~d~~~a 71 (124)
T 2O7A_A 1 MKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEA 71 (124)
T ss_dssp CCCGGGSCCHHHHHHHHHHHHTCTTT---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHccc---------chhHHhCCHHHHHHHHHHHhhCChhhhccCHHHHHHHHcCCHHHH
Q ss_pred HHHHhcc-cchhccCCCchHHHHHHH
Q FD01845373_000 188 KNNISNT-HWLTAFSVPRARFNARKD 212 (214)
Q Consensus 188 ~~~i~~~-~W~~~~~Vp~dRf~rR~~ 212 (214)
...|.+. ... ..+ .||..
T Consensus 72 ~~~~~~~~~~~---~~~----~R~~~ 90 (124)
T 2O7A_A 72 AVNLAKSRWYN---QTP----NRAKR 90 (124)
T ss_dssp HHHHTTSHHHH---HSH----HHHHH
T ss_pred HHHHHhCcccc---CCH----HHHHH
No 48
>6F03_C BPSL2520; Antigen, Burkholderia, putative exported protein, Immune system; HET: ACT, MSE, GOL; 2.2A {Burkholderia pseudomallei K96243}
Probab=55.90 E-value=1.1e+02 Score=26.84 Aligned_cols=107 Identities=8% Similarity=-0.014 Sum_probs=0.0 Template_Neff=8.600
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Q FD01845373_000 55 ETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLS 134 (214)
Q Consensus 55 ~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~ 134 (214)
...+.+.+...| +.......+-.....-......-+.......+ .++.+++..++..+-..+.......+.
T Consensus 43 ~~~a~~l~~l~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (199)
T 6F03_C 43 KAAIKDLLDAID-----APKLVSAIANSAEMQSKQLVPAILSDALSENK----TLNDKQKQAAVPTLQKNAVPKLVDGAG 113 (199)
T ss_dssp HHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCS----SSCHHHHHHHHHHCCCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CCCHHHHHHHHHHHHHhHHHHHHHHHH
Q ss_pred cccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHHHHHHH
Q FD01845373_000 135 NGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRYFINDL 180 (214)
Q Consensus 135 k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~iq~~~ 180 (214)
. .++|..+.+.+.+.++ =.|+--+++..-+.+..+.
T Consensus 114 ~---------~~~~~~~~~~~~~~~~-~~Y~~~fS~~EL~~l~aFy 149 (199)
T 6F03_C 114 K---------VFGTQQFTNDAMQAQY-DAYAKYYSTSEIKDLTTFY 149 (199)
T ss_dssp G---------GGGSHHHHHHHHHHHH-HHHHHHCCHHHHHHHHHHH
T ss_pred H---------HcCchhhhHHHHHHHH-HHHHHhCCHHHHHHHHHHH
No 49
>7XE7_A Endolysin; Intermolecular disulfide symmetry cross-linked crystal, HYDROLASE; HET: GOL; 1.05A {Escherichia virus T4}
Probab=53.53 E-value=1.4e+02 Score=22.17 Aligned_cols=81 Identities=12% Similarity=0.162 Sum_probs=0.0 Template_Neff=12.700
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-H
Q FD01845373_000 107 QLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-R 184 (214)
Q Consensus 107 ~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~ 184 (214)
..+|.++-..|+......+...+.+.... .-.|+.|+...+++++++.|......-.. ..+...+..+ .
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~ 126 (164)
T 7XE7_A 56 GVITKDEAEKLFCQDVDAAVRGILRNAKL---------KPVYDSLDCVRRAALINMVFQMGETGVAGFCNSLRMLQQKRW 126 (164)
T ss_dssp TBCCHHHHHHHHHHHHHHHHHHHHHCTTH---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHccc---------chHHHhCCHHHHHHHHHHHHhcCHhHHhccHHHHHHHHcCCH
Q ss_pred HHHHHHHhcccc
Q FD01845373_000 185 QSFKNNISNTHW 196 (214)
Q Consensus 185 ~~~~~~i~~~~W 196 (214)
......+.+..|
T Consensus 127 ~~~~~~~~~~~~ 138 (164)
T 7XE7_A 127 DEAAVNLAKSRW 138 (164)
T ss_dssp HHHHHHHTSSHH
T ss_pred HHHHHHHHhCHH
No 50
>PF00959.23 ; Phage_lysozyme ; Phage lysozyme
Probab=53.09 E-value=1.4e+02 Score=22.20 Aligned_cols=86 Identities=8% Similarity=-0.048 Sum_probs=0.0 Template_Neff=10.900
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHh--cccchhhcccCCCHHHcCHHHHHHHHhheeCCCC-----------CcccHHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLS--NGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDN-----------SPRTRRY 175 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~--k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDy-----------t~~tR~~ 175 (214)
||.+|...||...+..+...+++... . |++..++.++|+.|.... .......
T Consensus 18 it~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (119)
T ENLYS_BPP1/55- 18 KTDQQIAADWEKNILIAERCINQHFRGKD---------------MPDNAFSAMTSAAFNMGCNSLRTYYSKARGMRVETS 82 (119)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCC---------------CCHHHHHHHHHHHhhccCcchhhcccccCCCcccCH
Q ss_pred HHHHHHhC-HHHHHHHHhcc--cchhccCCCchHHHHHHH
Q FD01845373_000 176 FINDLNEC-RQSFKNNISNT--HWLTAFSVPRARFNARKD 212 (214)
Q Consensus 176 iq~~~~~n-~~~~~~~i~~~--~W~~~~~Vp~dRf~rR~~ 212 (214)
+...+.++ ..+....|... .+. ......-.+|.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~gl~~rr~~ 119 (119)
T ENLYS_BPP1/55- 83 IHKWAQKGEWVNMCNHLPDFVNSNG---VPLRGLKIRREK 119 (119)
T ss_pred HHHHHHCCChhHHHHhhHHhHccCC---ccCcchHHHhcC
No 51
>5I14_A mutated and truncated T4 lysozyme; T4 lysozyme, hydrolase; 1.745A {Enterobacteria phage T4}
Probab=52.05 E-value=1.5e+02 Score=22.21 Aligned_cols=97 Identities=9% Similarity=0.078 Sum_probs=0.0 Template_Neff=10.800
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCccc-HHHHHHHHHh
Q FD01845373_000 104 KNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRT-RRYFINDLNE 182 (214)
Q Consensus 104 ~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~t-R~~iq~~~~~ 182 (214)
+....||.++=..|+..-...+...+.+.+.. ...|+.|++..+++++|+.|.--...-. -..+..++.+
T Consensus 10 ~~g~~~t~~~~~~ll~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~n~G~~~~~~~~~~~~~~~~ 80 (121)
T 5I14_A 10 DEGGGSGGDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTHSLHALQH 80 (121)
T ss_dssp HSCCCTTHHHHHHHHHHHHHHHHHHHHHCTTT---------HHHHHHSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHccc---------chhHHhCCHHHHHHHHHHHhhCChhhhccCHHHHHHHHc
Q ss_pred C-HHHHHHHHhcccchhccCCCchHHHHHHH
Q FD01845373_000 183 C-RQSFKNNISNTHWLTAFSVPRARFNARKD 212 (214)
Q Consensus 183 n-~~~~~~~i~~~~W~~~~~Vp~dRf~rR~~ 212 (214)
+ ..+....|....|. +....|-++-.+
T Consensus 81 g~~~~a~~~~~~~~~~---~~~~~r~~~~~~ 108 (121)
T 5I14_A 81 KHWDHAAVHLAKSRWY---NQTPNRAKRVIT 108 (121)
T ss_dssp TCHHHHHHHHTSSHHH---HHSHHHHHHHHH
T ss_pred CCHHHHHHHHHcCHHH---hcCHHHHHHHHH
No 52
>PF14747.10 ; DUF4473 ; Domain of unknown function (DUF4473)
Probab=49.78 E-value=44 Score=25.77 Aligned_cols=25 Identities=12% Similarity=0.167 Sum_probs=0.0 Template_Neff=6.700
Q ss_pred CCHHHHHHHHHHhhhcCCCCCHHHHHHHHh
Q FD01845373_000 53 QTETYINSLFQEMEKDAKPLSDSLKKWLLG 82 (214)
Q Consensus 53 rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~ 82 (214)
.+..++.++|.+|| ||+..+.-|.+
T Consensus 2 pt~~~~~~eL~aAG-----~S~~~idgi~k 26 (78)
T E3LPJ7_CAERE/2 2 PTADEVKAQLVAAG-----ISDKAAQGIVD 26 (78)
T ss_pred CCHHHHHHHHHHCC-----CCHHHHHHHHH
No 53
>5W0P_C Endolysin,Rhodopsin,S-arrestin; rhodopsin, GPCR, arrestin, GRK, phosphorylation codes, membrane proteins, SIGNALING PROTEIN; HET: TPO, NAG, SEP; 3.013A {Enterobacteria phage RB55}
Probab=49.02 E-value=1.6e+02 Score=30.45 Aligned_cols=80 Identities=13% Similarity=0.186 Sum_probs=0.0 Template_Neff=11.300
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HH
Q FD01845373_000 108 LLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQ 185 (214)
Q Consensus 108 eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~ 185 (214)
.||.++-..||..-...++..+++.+.. .-.|+.|++.-++.++|+.|.-.-....... +.+.+.++ ..
T Consensus 56 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~yn~G~~~~~~~~~~~~~~~~~~~~ 126 (906)
T 5W0P_C 56 VITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWD 126 (906)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHHSTTH---------HHHHHHSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHTTCHH
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHHccC---------CcchhhCCHHHHHHHHHHHHhcCcccccCChhHHHHHHcCCHH
Q ss_pred HHHHHHhcccc
Q FD01845373_000 186 SFKNNISNTHW 196 (214)
Q Consensus 186 ~~~~~i~~~~W 196 (214)
+....+....|
T Consensus 127 ~~~~~~~~~~~ 137 (906)
T 5W0P_C 127 EAAVNLAKSRW 137 (906)
T ss_dssp HHHHHHHSSHH
T ss_pred HHHHHHHhccc
No 54
>2IGS_H Hypothetical protein; helix-bundles, alpha-beta, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION; HET: SO4, MSE, ACY; 2.17A {Pseudomonas aeruginosa} SCOP: d.2.1.11, l.1.1.1
Probab=48.87 E-value=42 Score=31.27 Aligned_cols=49 Identities=24% Similarity=0.386 Sum_probs=0.0 Template_Neff=1.900
Q ss_pred CCCCCccccCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCC
Q FD01845373_000 30 PNNNGAVIGVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQ 87 (214)
Q Consensus 30 P~~~~~v~~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~ 87 (214)
|...|.....||++++-|..|+..+.. .+.+.. +|++.-..+..+.|+.
T Consensus 136 ~~sgG~~~q~SGl~VsYGvnl~~Lt~~----q~~aMn-----LP~diK~LvtpGVGl~ 184 (219)
T 2IGS_H 136 TDASGGISQESGLLVSYGVNLRTLTPG----TWQAMT-----LPEDIKALVGPGVGLR 184 (219)
T ss_dssp CCTTSSCCTTCCEEETTTEETTTCCHH----HHHHCC-----CCHHHHHHHGGGTTCC
T ss_pred ecCCCCcccccceEEEeeeeccCCChh----hhHhcC-----CChHHHHHHcCCCccc
No 55
>6VBU_2 Bardet-Biedl syndrome 2 protein homolog; Cilia, ciliopathy, complex, membrane-protein transport, PROTEIN TRANSPORT; 3.1A {Bos taurus}
Probab=48.00 E-value=74 Score=32.26 Aligned_cols=75 Identities=12% Similarity=0.058 Sum_probs=0.0 Template_Neff=10.600
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHh----heeCCCCCcccH-HHHHHHHHhC-HHH
Q FD01845373_000 113 QQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVD----LTFRGDNSPRTR-RYFINDLNEC-RQS 186 (214)
Q Consensus 113 QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVD----L~YrGDyt~~tR-~~iq~~~~~n-~~~ 186 (214)
.+...+...|..+.+..+.+....... ..+-+.|-..++++.+| .++||......- ..+..++.++ ++.
T Consensus 635 ~~~~~l~~~y~~~~~~~~~~~~~~~~~-----~~~~~~L~~~l~~l~~~i~~~~~lr~~~~~~~~~~~~~~~l~~~~~~~ 709 (721)
T 6VBU_2 635 RDMKTMKNRYKELYDLNKDLLNGYKIR-----CNNHTELLGSLKAVNQAIQRAGHLRVGKPKNQVITACRDAIRSNNINM 709 (721)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSCSTHHHHHHHHHHHHHHTTCHHH
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHcCCHHH
Q ss_pred HHHHHh
Q FD01845373_000 187 FKNNIS 192 (214)
Q Consensus 187 ~~~~i~ 192 (214)
|.++|.
T Consensus 710 l~~~~~ 715 (721)
T 6VBU_2 710 LFRIMR 715 (721)
T ss_dssp HHHHHH
T ss_pred HHHHHH
No 56
>PF14174.10 ; YycC ; YycC-like protein
Probab=45.90 E-value=33 Score=25.23 Aligned_cols=17 Identities=24% Similarity=0.264 Sum_probs=0.0 Template_Neff=2.900
Q ss_pred CCCCHHHHHHHHhhcCC
Q FD01845373_000 70 KPLSDSLKKWLLGSVGK 86 (214)
Q Consensus 70 ~pi~~~~a~~ls~aaGl 86 (214)
||||.+.|.+||+.++.
T Consensus 2 rPiSaETA~kLa~~L~v 18 (49)
T L0E922_THECK/4 2 RPISPDTAIKLSKYLGV 18 (49)
T ss_pred CCCCHHHHHHHHHHHCC
No 57
>4NSO_A Effector protein; Helix, peptidoglycan, PROTEIN BINDING; HET: MSE; 2.4A {Vibrio cholerae O1 biovar El Tor}
Probab=43.66 E-value=2e+02 Score=24.79 Aligned_cols=183 Identities=13% Similarity=0.050 Sum_probs=0.0 Template_Neff=11.700
Q ss_pred CCCCcceeeeeccCCCCCCCCccCcCCcCCCCCCccccCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHH
Q FD01845373_000 1 LTVPFGQLTFDSEGNDIKDSIYFSRRPHVPNNNGAVIGVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWL 80 (214)
Q Consensus 1 l~V~~GqlTFdaEGnd~~~s~yfSR~~H~P~~~~~v~~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~l 80 (214)
+.++...+.|+.+|.+. ...+...-..++. |..+++-+++++ +...+...+...+ ..
T Consensus 101 ~~~~~~~~~~~s~g~~~---~~~~~~~~~~gg~------s~g~~~~~~~~~--t~~~~~~~~~~~~------------~~ 157 (301)
T 4NSO_A 101 WPLGKTSEKYESAGRGP---GVISTGNGDYGGA------SYGCYQMSSNLG--VVQKYIQSSKFKE------------FF 157 (301)
T ss_dssp CCTTGGGHHHHTTTCCT---TCEEECSSTTCCE------EETTTTEETTTT--HHHHHHHHSTTGG------------GG
T ss_pred cccchHHHhhhccCCCC---ceeecCCCCCCCc------ccceeEeccCCc--hHHHHHHhcccHH------------HH
Q ss_pred HhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHH----HHhcccchhhcccCCCHHHcCHHHH
Q FD01845373_000 81 LGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKR----VLSNGVDIDNVRITANLDAFEQKIQ 156 (214)
Q Consensus 81 s~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kr----i~~k~~~~~~Y~~~~~W~~L~~~Ik 156 (214)
+.....+......|-.-...... .+...|+......-|....+..++ +.........+ .-..+....+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~vq~g~~~~ 232 (301)
T 4NSO_A 158 SGLNPATKEFNVVWQDIASRYPQ----EFREEQHQFIKRTHYDIQIGHLRGKGLLFEHNRAAVHDL-IWSTSVQFGGRTN 232 (301)
T ss_dssp TTCCSSSHHHHHHHHHHHHHCHH----HHHHHHHHHHCCCCCCHHHHHHHHTTCCCSSCCHHHHHH-HHHHHHHHCTTCC
T ss_pred cCCCCCCHHHHHHHHHHHHHChH----HHHHHHHHHHHHHcHHHHHHHHHHcCCccccchHHhHhe-eEeehhhccCcch
Q ss_pred HHHHhheeCCCCCcccHHHHHHHHHhCHHHHHHHHhcc-cchhccCCCchHHHHHHHhC
Q FD01845373_000 157 DVLVDLTFRGDNSPRTRRYFINDLNECRQSFKNNISNT-HWLTAFSVPRARFNARKDYL 214 (214)
Q Consensus 157 dvlVDL~YrGDyt~~tR~~iq~~~~~n~~~~~~~i~~~-~W~~~~~Vp~dRf~rR~~yL 214 (214)
.++.++.+.|......++++...-......-..+..+. .|. .=...||.+++.-|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~---~~~~~r~~~e~~~~ 288 (301)
T 4NSO_A 233 LIFNALNGQNMESMTDKDIIILVQDYKLVNTERLFKSSPSWW---SDLKKRAVSEKKAL 288 (301)
T ss_dssp HHHHHTCSCCSSSCCHHHHHHHHHHHHHHSHHHHTTTCGGGH---HHHHHHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCHHHHHHHHHHhccccccccccCCHHHH---HHHHHHHHHHHHHH
No 58
>7RGR_A Artificial protein L056; Lysozyme, designed proteins, HYDROLASE; HET: NHE; 2.48A {synthetic construct}
Probab=43.18 E-value=2.3e+02 Score=21.60 Aligned_cols=94 Identities=13% Similarity=0.152 Sum_probs=0.0 Template_Neff=12.200
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccH-HHHHHHHHhC-HHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTR-RYFINDLNEC-RQS 186 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR-~~iq~~~~~n-~~~ 186 (214)
+|..+-..||......+.....+.... .-+|+.|+...++.++++.|.....+-.. ..+...+..+ ..+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 132 (168)
T 7RGR_A 62 ITEKEARQIFEGDVKKAIQGILSNATL---------SPIYDILDEVRRCALINMVFQMGVAGVAGFNNSLRMLQEKRWDE 132 (168)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSTTH---------HHHHHHSCHHHHHHHHHHHHHSCHHHHTTCHHHHHHHHTTCTTH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhccc---------CchHHhCCHHHHHHHHHHHHhCCcchhhccHHHHHHHHcCCHHH
Q ss_pred HHHHHhcccchhccCCCchHHHHHHHhC
Q FD01845373_000 187 FKNNISNTHWLTAFSVPRARFNARKDYL 214 (214)
Q Consensus 187 ~~~~i~~~~W~~~~~Vp~dRf~rR~~yL 214 (214)
....+.+..|. .-...|..+-...+
T Consensus 133 ~~~~~~~~~~~---~~~~~r~~~~~~~~ 157 (168)
T 7RGR_A 133 AAVNLAQSRWY---RQTPNRAKRVISTF 157 (168)
T ss_dssp HHHHHHSSHHH---HHSHHHHHHHHHHH
T ss_pred HHHHHHcCHHH---hcCHHHHHHHHHHH
No 59
>6VBU_7 Bardet-Biedl syndrome 7 protein homolog; Cilia, ciliopathy, complex, membrane-protein transport, PROTEIN TRANSPORT; 3.1A {Bos taurus}
Probab=43.15 E-value=69 Score=33.09 Aligned_cols=72 Identities=15% Similarity=0.273 Sum_probs=0.0 Template_Neff=9.700
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHh-heeCCCCCcccHHHHHHHHHhC-HHHHHHHHhc
Q FD01845373_000 117 LFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVD-LTFRGDNSPRTRRYFINDLNEC-RQSFKNNISN 193 (214)
Q Consensus 117 LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVD-L~YrGDyt~~tR~~iq~~~~~n-~~~~~~~i~~ 193 (214)
.+..-|.++.+.+..+....... ..+-+.|-..|+|+.+| -+++|-.....-..+..++.++ ++.|.++|..
T Consensus 641 ~l~~~~~~~l~~~~~~~~~~~~~-----~~~~~~l~~~~~~l~~~~~k~~g~~~~~~~~~l~~~l~~~~~~~l~~~f~~ 714 (715)
T 6VBU_7 641 FLIPEYRCILEEADHLQEEYKKQ-----PAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDSYDQNALIAFFDA 714 (715)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTH-----HHHHHHHHHHHHHHHHHHHHHHTCCCTTTTGGGHHHHHHCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHhHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHhhcCCCHhhhHHHHHHHHHhCCHHHHHHHHhc
No 60
>6BG3_A Endolysin, DCN1-like protein 1 chimera; E3 Ligase, HYDROLASE, LIGASE-INHIBITOR complex; HET: DOJ; 1.05A {Enterobacteria phage T4}
Probab=35.15 E-value=6.2e+02 Score=24.36 Aligned_cols=112 Identities=14% Similarity=0.156 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred cEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHH
Q FD01845373_000 42 VTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAV 121 (214)
Q Consensus 42 VTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~ 121 (214)
.|||-|+.+. ...........+-.......+ ..||.+|-..||..-
T Consensus 47 ~TiG~G~~l~-------------------------------~~~~~~~~~~~~~~~~~~~~~---~~it~~~a~~ll~~d 92 (384)
T 6BG3_A 47 YTIGIGHLLT-------------------------------KSPSLNAAKSELDKAIGRNTN---GVITKDEAEKLFNQD 92 (384)
T ss_dssp EEEETTEEEE-------------------------------SCSCHHHHHHHHHHHHTSCCT---TBCCHHHHHHHHHHH
T ss_pred eeeeeeecCC-------------------------------CCcchHHHHHHHhhhhcCCCC---CccCHHHHHHHHhhH
Q ss_pred HHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCccc-HHHHHHHHHhC-HHHHHHHHhcccc
Q FD01845373_000 122 YKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRT-RRYFINDLNEC-RQSFKNNISNTHW 196 (214)
Q Consensus 122 Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~t-R~~iq~~~~~n-~~~~~~~i~~~~W 196 (214)
...+...+.+.+.. ...|..|+...++.++++.|......-. ...+...+.++ ..+-...+....|
T Consensus 93 l~~~~~~~~~~~~~---------~~~~~~l~~~~~~al~~~~~~~G~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~ 160 (384)
T 6BG3_A 93 VDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRW 160 (384)
T ss_dssp HHHHHHHHHTCTTH---------HHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHHHHHHHTSHH
T ss_pred HHHHHHHHHHhccc---------hhhHhcCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHcCCHHHHHHHhhhhHh
No 61
>3O39_B Periplasmic protein related to spheroblast formation; alpha-helical, Structural Genomics, Montreal-Kingston Bacterial Structural Genomics Initiative, BSGI, chaperone; HET: MSE; 2.599A {Escherichia coli}
Probab=33.17 E-value=1.2e+02 Score=22.89 Aligned_cols=64 Identities=9% Similarity=0.107 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHH
Q FD01845373_000 55 ETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQY 126 (214)
Q Consensus 55 ~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~ 126 (214)
..++...|..-+ .+......+.....-.......-...+...+. ..+|++|+.++...+-..++
T Consensus 45 ~~~l~~~l~~~~-----~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Lt~eQ~~k~~~~~~~~~~ 108 (108)
T 3O39_B 45 RRAMHDIIASDT-----FDKAKAEAQIAKMEEQRKANMLAHMETQNKIY---NILTPEQKKQFNANFEKRLT 108 (108)
T ss_dssp HHHHHHHHSSSS-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHhcC
No 62
>4KWA_B Transcriptional regulator; Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, TetR family, TRANSCRIPTION REGULATOR; HET: MSE, CHT; 1.8A {Saccharomonospora viridis}
Probab=32.74 E-value=3.1e+02 Score=20.55 Aligned_cols=120 Identities=10% Similarity=0.058 Sum_probs=0.0 Template_Neff=13.300
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhc
Q FD01845373_000 56 TYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSN 135 (214)
Q Consensus 56 ~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k 135 (214)
....+.+..-| +..-....+++.+|++...-..+..+-...+. .++......+..........
T Consensus 11 ~aa~~l~~~~g-----~~~~s~~~ia~~agvs~~t~y~~F~~k~~l~~------------~~~~~~~~~~~~~~~~~~~~ 73 (195)
T 4KWA_B 11 ETAWRLIARRG-----YHNVRIHDIASELGTSNATIHYHFPSKKDILL------------EALRRNVKLAFDRQVAELHT 73 (195)
T ss_dssp HHHHHHHHHHC-----GGGCCHHHHHHHHSCCHHHHHHHCSSHHHHHH------------HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhC-----cccccHHHHHHHHCCCHHHHHHHCCCHHHHHH------------HHHHHHHHHHHHHHHHHHhc
Q ss_pred ccchhhcc-----cCCCHHHcCHHHHHHHHhheeCCCCCcccHHHHHHHHHhCHHHHHHHHh
Q FD01845373_000 136 GVDIDNVR-----ITANLDAFEQKIQDVLVDLTFRGDNSPRTRRYFINDLNECRQSFKNNIS 192 (214)
Q Consensus 136 ~~~~~~Y~-----~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~iq~~~~~n~~~~~~~i~ 192 (214)
........ ..+++....+....++..+.......+..++.+..........+...+.
T Consensus 74 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 135 (195)
T 4KWA_B 74 IADARERLVRLVELQLPTPGLLRDEWSVWLQVWTESTLNPKIRDLYNDAYDRWYQTIAMTIR 135 (195)
T ss_dssp CCCHHHHHHHHHHTTSCCTTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCccccchHhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
No 63
>1XOU_A EspA; coiled coil, helix bundle, heterodimer, Structural protein-chaperone COMPLEX; HET: MSE; 2.8A {Escherichia coli} SCOP: a.231.1.1
Probab=32.40 E-value=4.8e+02 Score=23.96 Aligned_cols=98 Identities=9% Similarity=0.113 Sum_probs=0.0 Template_Neff=6.300
Q ss_pred cccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHH
Q FD01845373_000 47 GLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQY 126 (214)
Q Consensus 47 GYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~ 126 (214)
+||++..+..+|..+|..-+ +-...+..++.-+-+-.+.|...+.+. |.+.=-......+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~s-----~~~~~~~v~~~~~~~l~~~a~~~~~~m--------------~~~~~~ar~a~~~a 81 (192)
T 1XOU_A 21 AYDLGSMSKDDVIDLFNKLG-----VFQAAILMFAYMYQAQSDLSIAKFADM--------------NEASKESTTAQKMA 81 (192)
T ss_dssp ----------CTTCHHHHHH-----HHHHHHHHHHHHHHHHHTC------------------------------------
T ss_pred cccCCCCCHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHH
Q ss_pred HHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHh----heeCC
Q FD01845373_000 127 EVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVD----LTFRG 166 (214)
Q Consensus 127 ~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVD----L~YrG 166 (214)
+.+..+..+..... ..-.=..||+.+++-+-| |.+-|
T Consensus 82 n~v~~~ia~~~~~~---d~~~t~~lp~dv~~ym~~~~ngI~v~~ 122 (192)
T 1XOU_A 82 NLVDAKIADVQSSS---DKNAKAQLPDEVISYINDPRNDITISG 122 (192)
T ss_dssp --------------------------------------------
T ss_pred HHHHHHHHHHhccC---CcccccCCCHHHHHHHhhhccCCeecC
No 64
>6K41_R Alpha-2A adrenergic receptor,Endolysin,Alpha-2B adrenergic receptor,Alpha-2B adrenergic receptor; GPCR, Complex, cryo-EM, MEMBRANE PROTEIN; HET: CZX; 2.9A {Homo sapiens}
Probab=31.33 E-value=6.9e+02 Score=23.69 Aligned_cols=112 Identities=13% Similarity=0.148 Sum_probs=0.0 Template_Neff=11.700
Q ss_pred cEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHH
Q FD01845373_000 42 VTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAV 121 (214)
Q Consensus 42 VTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~ 121 (214)
.|||-|.-+..............+| .. ..... .+|++|+..++...
T Consensus 69 ~tig~g~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~----~~t~~~a~~~l~~~ 114 (512)
T 6K41_R 69 YTIGIGHLLTKSPSLNAAKSELDKA-----IG-------------------------RNTNG----VITKDEAEKLFNQD 114 (512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEeeeeccCCChhhHHHHhhhhhh-----cc-------------------------cCCCC----ccCHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHhC-HHHHHHHHhcccc
Q FD01845373_000 122 YKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNEC-RQSFKNNISNTHW 196 (214)
Q Consensus 122 Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~n-~~~~~~~i~~~~W 196 (214)
-...+..+.+.... ...|+.+.+...|.++++.|.--.+.....- ....+.++ ..+....+.+..|
T Consensus 115 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (512)
T 6K41_R 115 VDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRW 182 (512)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcc---------cccccCCcHHHHHHHHHHHHhcCCCccccchHHHHHHHhhcHHHHHHHhhcccc
No 65
>6IU5_E VIT1; membrane protein, METAL TRANSPORT; HET: ZN; 2.25A {Eucalyptus grandis}
Probab=31.28 E-value=1.9e+02 Score=20.19 Aligned_cols=44 Identities=7% Similarity=0.059 Sum_probs=0.0 Template_Neff=10.300
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCC
Q FD01845373_000 55 ETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVP 103 (214)
Q Consensus 55 ~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~ 103 (214)
..++...|...| +++..+..++..+.-......+|+......+.
T Consensus 28 ~~~l~~~~~~~G-----~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 71 (79)
T 6IU5_E 28 AAEVAEILARYG-----IEPHEYGPVVNALRKKPQAWLDFMMKFELGLE 71 (79)
T ss_dssp HHHHHHHHHTTT-----CCHHHHHHHHHHHHTCHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHcC-----CCHHHhHHHHHHHHHCHHHHHHHHHHHhhCCC
No 66
>7JOZ_R Endolysin,D(1A) dopamine receptor; Dopamine receptor, D1, non-catechol agonist, G protein, MEMBRANE PROTEIN; HET: 1PE, VFP; 3.8A {Homo sapiens}
Probab=30.45 E-value=5.2e+02 Score=24.66 Aligned_cols=84 Identities=12% Similarity=0.182 Sum_probs=0.0 Template_Neff=11.700
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHH-HHHHHHh
Q FD01845373_000 104 KNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRY-FINDLNE 182 (214)
Q Consensus 104 ~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~-iq~~~~~ 182 (214)
.....||++|-..||..--..+++.+.+.... ...|..|++.-.+.++++.|........... +...+..
T Consensus 98 ~~~~~~t~~~a~~~l~~dl~~~~~~v~~~~~~---------~~~~~~l~~~~~~al~~~~~n~g~~~~~~~~~~~~~~~~ 168 (540)
T 7JOZ_R 98 NTNGVITKDEAEKLFNQDVDAAVRGILRNAKL---------KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQ 168 (540)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHHHHHSSTT---------HHHHHHSCHHHHHHHHHHHHHSCHHHHTTCHHHHHHHHT
T ss_pred CCCCccCHHHHHHHHHhhHHHHHHHHHHHhcc---------ccccccCcHHHHHHHHHHHeeCCcCccccccHHHHHHhc
Q ss_pred C-HHHHHHHHhcccc
Q FD01845373_000 183 C-RQSFKNNISNTHW 196 (214)
Q Consensus 183 n-~~~~~~~i~~~~W 196 (214)
+ .......+....|
T Consensus 169 ~~~~~~~~~l~~~~~ 183 (540)
T 7JOZ_R 169 KRWDEAAVNLAKSRW 183 (540)
T ss_dssp TCHHHHHHHHHSSTT
T ss_pred chHHHHHHHHHhccc
No 67
>PF19795.3 ; DUF6279 ; Family of unknown function (DUF6279)
Probab=29.71 E-value=5.8e+02 Score=22.37 Aligned_cols=126 Identities=14% Similarity=0.065 Sum_probs=0.0 Template_Neff=8.700
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHH-HHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Q FD01845373_000 56 TYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGAS-ALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLS 134 (214)
Q Consensus 56 ~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~-A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~ 134 (214)
.++..++...+ ++++.+.++...+---... +..++........ .+|++|...|...+-....+..+.. .
T Consensus 37 ~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~p~~a~ll~----sL~~~Q~~~l~~~l~~~~~e~~~e~-~ 106 (197)
T G8PZJ2_PSEO1/4 37 DRLKTMVQTEQ-----VTDEALQQRTREAKAAIAETARAITPSAIELLQ----GLNDDQVDDMDAAFVKDQRKRQQQY-L 106 (197)
T ss_pred HHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHHH-C
Q ss_pred cccchhhcccCCCHHHcC-HHHHHHHHhheeC--CCCCcccHHHHHHHHHhCHHHHHHHHhcc-cchhccCCCchHHHH
Q FD01845373_000 135 NGVDIDNVRITANLDAFE-QKIQDVLVDLTFR--GDNSPRTRRYFINDLNECRQSFKNNISNT-HWLTAFSVPRARFNA 209 (214)
Q Consensus 135 k~~~~~~Y~~~~~W~~L~-~~IkdvlVDL~Yr--GDyt~~tR~~iq~~~~~n~~~~~~~i~~~-~W~~~~~Vp~dRf~r 209 (214)
..... .- ....+=++|-.=+ |+.++.-+..|...+..........+..+ .|. .+|..
T Consensus 107 ~~~~~-----------~~~~~r~~r~~~~~e~w~G~Lt~~Q~~~i~~~~~~~~~~~~~~l~~r~~~~-------~~l~~ 167 (197)
T G8PZJ2_PSEO1/4 107 KPTLQ-----------EQIQQRSERMVKRLNDWLGPLNDAQRQRVMAWSTALGDQNQQWIANRAHWQ-------NQFSE 167 (197)
T ss_pred CCHHH-----------HHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhccchHHHHHHHHHHH-------HHHHH
No 68
>5IHF_B VirG-like protein; LTxxQ motif, CpxP_like family, UNKNOWN FUNCTION; HET: PO4; 1.576A {Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344}
Probab=29.65 E-value=2.1e+02 Score=21.43 Aligned_cols=64 Identities=13% Similarity=0.055 Sum_probs=0.0 Template_Neff=10.700
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHH
Q FD01845373_000 55 ETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQY 126 (214)
Q Consensus 55 ~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~ 126 (214)
..++...+.+.. ++...+..+.....-.-.........+...+. ..+|++|+.++-..+-..++
T Consensus 53 ~~~~~~~~~~~~-----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~L~~eQ~~~~~~~~~~~~~ 116 (116)
T 5IHF_B 53 DGALIEVIKSGK-----WDDAAVKQQLAAFSNIEQQARYYRVKYYFDLS---KVLTPEQRQQVQQDLAQALE 116 (116)
T ss_dssp TTHHHHHHHHTS-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTSCHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCHHHHHHHHHHHHHHhC
No 69
>PF04256.16 ; DUF434 ; Protein of unknown function (DUF434)
Probab=28.16 E-value=2.6e+02 Score=20.47 Aligned_cols=39 Identities=10% Similarity=0.196 Sum_probs=0.0 Template_Neff=6.200
Q ss_pred CCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHH
Q FD01845373_000 85 GKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKR 131 (214)
Q Consensus 85 Gl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kr 131 (214)
|.....|.+||.++- .+|..|+..|+-.+++..+.....
T Consensus 16 gY~~~~al~lVg~~y--------~L~~rqR~~L~R~v~~~~~~~~r~ 54 (56)
T I0A2Q8_FERFK/1 16 NFKSETAINIASSKY--------FLSIKERELLKRCFHSFEFNKMVK 54 (56)
T ss_pred CCCHHHHHHHHHhcc--------CCCHHHHHHHHHHhCCHHHHHHHh
No 70
>PF14210.10 ; DUF4322 ; Domain of unknown function (DUF4322)
Probab=28.02 E-value=94 Score=24.36 Aligned_cols=45 Identities=4% Similarity=-0.040 Sum_probs=0.0 Template_Neff=3.000
Q ss_pred ccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHh
Q FD01845373_000 48 LDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNK 97 (214)
Q Consensus 48 YDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~ 97 (214)
+|++.+-.+++.+.|..|. +..+-.+.=+++.+.+++..+.|+..
T Consensus 22 l~FkgrK~eeV~KtLisaa-----l~ndsvEnk~k~~~~s~qtvrny~e~ 66 (66)
T Q97Y40_SACS2/1 22 LSFKGRKAEEVSRVLVSAC-----LWNDSVESKSKGYNVSPQTVRNYVEE 66 (66)
T ss_pred hccCcccHHHHHhHhhHhh-----hcCcchhcccccccCChHHHHhhhcC
No 71
>3ITF_B Periplasmic adaptor protein cpxP; CPX, CPXP, CPXR, CPXA, CPXRAP, CPX-PATHWAY, ENVELOPE STRESS, SIGNAL TRANSDUCTION, ADAPTOR PROTEIN, TWO-COMPONENT SYSTEM INHIBITOR, SIGNALING; HET: MSE; 1.45A {Escherichia coli str. K-12 substr.}
Probab=27.60 E-value=3.7e+02 Score=20.84 Aligned_cols=70 Identities=13% Similarity=0.129 Sum_probs=0.0 Template_Neff=10.900
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHH
Q FD01845373_000 55 ETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRV 132 (214)
Q Consensus 55 ~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri 132 (214)
..++.+.|.... .+.+.+..+.....-.-.........+...+. ..+|++|+.+|....-......-++.
T Consensus 73 ~~~~~~~~~~~~-----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Lt~eQ~~~~~~~~~~~~~~~~~~~ 142 (145)
T 3ITF_B 73 LETMHRLVTAEN-----FDENAVRAQAEKMANEQIARQVEMAKVRNQMY---RLLTPEQQAVLNEKHQQRMEQLRDVT 142 (145)
T ss_dssp HHHHHHHHTCSS-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTSCHHHHHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHHHHHHHHHh
No 72
>4ICH_B Transcriptional regulator; Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, transcriptional regulator, Transcription Regulator; HET: MSE, B3P; 1.95A {Saccharomonospora viridis}
Probab=27.40 E-value=3.9e+02 Score=23.04 Aligned_cols=120 Identities=10% Similarity=0.058 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhc
Q FD01845373_000 56 TYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSN 135 (214)
Q Consensus 56 ~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k 135 (214)
..+...|...| +..-....|++.+|++-..-..+..+....+. .++...+.............
T Consensus 127 ~a~~~l~~~~g-----~~~~ti~~ia~~agvs~~~~y~~f~~k~~L~~------------~~~~~~~~~~~~~~~~~~~~ 189 (311)
T 4ICH_B 127 ETAWRLIARRG-----YHNVRIHDIASELGTSNATIHYHFPSKKDILL------------EALRRNVKLAFDRQVAELHT 189 (311)
T ss_dssp HHHHHHHHHHC-----GGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHH------------HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHC-----cccCCHHHHHHHHCCCHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHhhc
Q ss_pred ccchhhcc-----cCCCHHHcCHHHHHHHHhheeCCCCCcccHHHHHHHHHhCHHHHHHHHh
Q FD01845373_000 136 GVDIDNVR-----ITANLDAFEQKIQDVLVDLTFRGDNSPRTRRYFINDLNECRQSFKNNIS 192 (214)
Q Consensus 136 ~~~~~~Y~-----~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~iq~~~~~n~~~~~~~i~ 192 (214)
........ ..+.|....+..-.+++.+.......|..++.+..........+...+.
T Consensus 190 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 251 (311)
T 4ICH_B 190 IADARERLVRLVELQLPTPGLLRDEWSVWLQVWTESTLNPKIRDLYNDAYDRWYQTIAMTIR 251 (311)
T ss_dssp CCCHHHHHHHHHHTTSCCTTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHH
No 73
>8K4L_B Nuclear respiratory factor 1; Nuclear respiratory factor 1, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex; 2.1A {Homo sapiens}
Probab=26.96 E-value=3.7e+02 Score=25.84 Aligned_cols=67 Identities=21% Similarity=0.215 Sum_probs=0.0 Template_Neff=4.800
Q ss_pred HHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHh----ccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHH
Q FD01845373_000 60 SLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNK----IDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRV 132 (214)
Q Consensus 60 ~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~----~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri 132 (214)
+||..++ +..+....|+.+ |--|-+|..-|.. .+...++....|-+.||.+|+..+-..+.+.+.|.
T Consensus 4 ~~~~~~~-----~~d~~t~~la~a-g~vg~aaaaai~~~kkrkr~h~fetnpsirkrqqtrllrkl~~~ide~~trv 74 (232)
T 8K4L_B 4 SDILNST-----AADEVTAHLAAA-GPVGMAAAAAVATGKKRKRPHVFESNPSIRKRQQTRLLRKLRATLDEYTTRV 74 (232)
T ss_dssp ---------------------------------------------CCCCCSHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred hhhhhhh-----chhHHHHHHHHc-CHHHHHHHHHHHhCCCCCCCcccCCChHHHHHHHHHHHHHHHHHHHHHHhhc
No 74
>8B2S_A GH24 family muramidase; SH3-like, muramidase, peptidoglycan, cell wall binding domain, HYDROLASE; 1.94A {Trichophaea saccata}
Probab=26.27 E-value=4.7e+02 Score=21.40 Aligned_cols=89 Identities=12% Similarity=0.060 Sum_probs=0.0 Template_Neff=12.200
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHHHHHHHHhC-HH--
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRYFINDLNEC-RQ-- 185 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~iq~~~~~n-~~-- 185 (214)
||.++-..||...+..+...+...+.. |..|++..++.++++.|...........+...+..+ ..
T Consensus 134 ~~~~~~~~l~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 201 (245)
T 8B2S_A 134 LTQETATKLLQSDIKTFTSCVSNYVKD------------SVKLNDNQYGALASWAFNVGCGNVQTSSLIKRLNAGENPNT 201 (245)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCT------------TSCEEHHHHHHHHHHHHHHCHHHHHTCHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHhHHHHHHHHHHHccc------------CCCCChhHHHHHheeeeecCCcchhcCHHHHHHHcCCCccc
Q ss_pred HHHHHHhcc--cchhccCCCchHHHHHHH
Q FD01845373_000 186 SFKNNISNT--HWLTAFSVPRARFNARKD 212 (214)
Q Consensus 186 ~~~~~i~~~--~W~~~~~Vp~dRf~rR~~ 212 (214)
.....+... ... .+......+|..
T Consensus 202 ~~~~~~~~~~~~~~---~~~~gl~~r~~~ 227 (245)
T 8B2S_A 202 VAAQELPKWKYAGG---KVMPGLVRRRNA 227 (245)
T ss_dssp HHHHHGGGCCEETT---EECHHHHHHHHH
T ss_pred hHHHHHHHHHhcCC---EeCchHHHHHHH
No 75
>2KZC_A Uncharacterized protein; DUF1476, JCSG, Structutral genomics, Protein Structure initiative, Structural Genomics, Joint Center for Structural Genomics, PSI, UNKNOWN; NMR {Jannaschia sp.}
Probab=25.95 E-value=1.5e+02 Score=23.06 Aligned_cols=22 Identities=23% Similarity=0.457 Sum_probs=0.0 Template_Neff=7.200
Q ss_pred HHHHHHhhcCCCHHHHHHHHHh
Q FD01845373_000 76 LKKWLLGSVGKQGASALTHCNK 97 (214)
Q Consensus 76 ~a~~ls~aaGl~G~~A~~fv~~ 97 (214)
.+.|.+...||+|++|..|+..
T Consensus 14 la~WAA~~lGl~~~~a~~Ya~~ 35 (85)
T 2KZC_A 14 MGLWVAEVLGKSGDEANAYAAE 35 (85)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHH
No 76
>6ET6_A Lysozyme; muramidase, Lysozyme, Acinetobacter baumannii, ANTIMICROBIAL PROTEIN; 1.2A {Acinetobacter baumannii}
Probab=25.72 E-value=5.7e+02 Score=20.93 Aligned_cols=87 Identities=17% Similarity=0.121 Sum_probs=0.0 Template_Neff=11.000
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHHHHHHHHhC-HHHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRYFINDLNEC-RQSF 187 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~iq~~~~~n-~~~~ 187 (214)
||.++-..||...+..+...+++.+... |++...+.++++.|.--........+...+..+ .+..
T Consensus 99 ~t~~~~~~l~~~~~~~~~~~~~~~~~~~--------------l~~~~~~al~s~~~n~G~~~~~~~~~~~~i~~~~~~~~ 164 (196)
T 6ET6_A 99 CTAEQAKTYFKHDLAKFEKTVNESVTAP--------------LTQNQFDALVSLTYNIGSGAFNNSTLLKKLNKGDYQGA 164 (196)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCSC--------------CCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHTTCHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHCCCC--------------CCHHHHHHHHHHHhhCCCccccCCcHHHHHHCCCHHHH
Q ss_pred HHHHhcc--cchhccCCCchHHHHHHH
Q FD01845373_000 188 KNNISNT--HWLTAFSVPRARFNARKD 212 (214)
Q Consensus 188 ~~~i~~~--~W~~~~~Vp~dRf~rR~~ 212 (214)
...|.+- ... .+......||..
T Consensus 165 ~~~~~~~~~~~~---~~~~gl~~rr~~ 188 (196)
T 6ET6_A 165 ADQFLVWNKAGG---KVMKGLVRRREA 188 (196)
T ss_dssp HHHGGGCCEETT---EECHHHHHHHHH
T ss_pred HHHHHHHhhcCC---ccChHHHHHHHH
No 77
>6MZM_A Transcription initiation factor TFIID subunit 1, TAF1; Transcription, DNA, Nuclear, transcription-dna complex;{Homo sapiens}
Probab=25.48 E-value=6.6e+02 Score=26.34 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=0.0 Template_Neff=7.000
Q ss_pred cceeeeeccCCCCCCCCccC--cCCcCCCCC---CccccCCccEeCccccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHH
Q FD01845373_000 5 FGQLTFDSEGNDIKDSIYFS--RRPHVPNNN---GAVIGVSGVTFGRGLDLGQQTETYINSLFQEMEKDAKPLSDSLKKW 79 (214)
Q Consensus 5 ~GqlTFdaEGnd~~~s~yfS--R~~H~P~~~---~~v~~~SGVTIGRGYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ 79 (214)
+++|.....|.-...+--|| |...-+... .......|.--|--=||...+-.++.+.|...| ++++.+..
T Consensus 358 k~~l~l~G~gDPtG~GeGfSflr~~~k~~~~~~~~~~~~~~~~vtgt~aDLRkL~~~e~~~~L~~~G-----v~~e~I~~ 432 (496)
T 6MZM_A 358 KCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFG-----VPEEEIKK 432 (496)
T ss_dssp SCEECCSSTTCSSSSSSSCCCCEECCC--------------------CHHHHTTTTHHHHHHHHHHT-----CCHHHHHH
T ss_pred CceeEEccCCCCCCCCceeeeeecCCCCCCCCCCCCCCCCCcccCCChHHHHHccHHHHHHHHHHhC-----CCHHHHHh
Q ss_pred HHh---------------hcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q FD01845373_000 80 LLG---------------SVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSNGVD 138 (214)
Q Consensus 80 ls~---------------aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~ 138 (214)
|.. ..|-.| ...|...+ ..|..+|..-+....+...+.=.+.+...+.
T Consensus 433 L~RWd~i~lvR~ls~~~~~~g~~~--~~kfar~~---------r~s~~~~~~~y~~~~q~I~~~Q~~~Ls~~~~ 495 (496)
T 6MZM_A 433 LSRWEVIDVVRTMSTEQARSGEGP--MSKFARGS---------RFSVAEHQERYKEECQRIFDLQNKVLSSTEV 495 (496)
T ss_dssp CCHHHHHHHHHHHHHC-----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred cCHHHHHHHHHHhcchhHhcCCCC--ccccccCC---------CCCHHHHHHHHHHHHHHHHHHHHHHhccCCC
No 78
>PF12105.12 ; SpoU_methylas_C ; SpoU, rRNA methylase, C-terminal
Probab=24.64 E-value=1.6e+02 Score=21.56 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=0.0 Template_Neff=5.700
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q FD01845373_000 111 RKQQHFLFKAVYKHQYEVTKR 131 (214)
Q Consensus 111 ~~QQ~~LF~~~Y~~~~~~~kr 131 (214)
.+.|+.||+..|+.+.+..++
T Consensus 17 e~~~~lLFew~~P~~a~~c~~ 37 (54)
T D3EQB8_ATETH/1 17 TTYNKILFEWSYPNISKLYKK 37 (54)
T ss_pred HHHHHHHHHhhCHHHHHHHHH
No 79
>6GHD_H Emerin; nuclear envelope, gene expression, ternary complex, PROTEIN BINDING; HET: SO4; 2.1A {Homo sapiens} SCOP: a.140.1.1
Probab=24.28 E-value=1.8e+02 Score=18.03 Aligned_cols=36 Identities=14% Similarity=0.256 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred cccCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHh
Q FD01845373_000 47 GLDLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLG 82 (214)
Q Consensus 47 GYDmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~ 82 (214)
+.|+...+..++...|...|..|-|+....-..+.+
T Consensus 1 ~~~~~~~~~~~l~~~l~~~~~~~gP~~~~tr~~y~k 36 (45)
T 6GHD_H 1 GDNYADLSDTELTTLLRRYNIPHGPVVGSTRRLYEK 36 (45)
T ss_dssp -CCSTTSCHHHHHHHHHHTTCCCCCCCTTTHHHHHH
T ss_pred CCchhhCCHHHHHHHHHHcCCCCCCCCcccHHHHHH
No 80
>PF06518.15 ; DUF1104 ; Protein of unknown function (DUF1104)
Probab=23.98 E-value=1.9e+02 Score=23.31 Aligned_cols=85 Identities=14% Similarity=0.001 Sum_probs=0.0 Template_Neff=6.500
Q ss_pred cCCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHH-HHHhccccCCcccccCCHHHHHHHHHHHHHHHHH
Q FD01845373_000 49 DLGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALT-HCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYE 127 (214)
Q Consensus 49 Dmg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~-fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~ 127 (214)
|....|.+++.+..-.+ +..-.+.-...+-.....++.+.+.. |-........++-..+|+++....-+.+-..+.+
T Consensus 1 DfS~~S~~EL~~~~g~~--~~~e~~~~~~El~kR~~~ms~eerk~~f~~~~k~~~~~~~~~ms~ee~~~~~~e~~~~~~~ 78 (93)
T F8KTN8_HELBC/2 1 DYSSLSGPELIKLAGKV--PAEDALELRAAVHKHVESLKTAKAKNSFKWKFKQAAEAHFKKMKKKDFVAMREEVRKEFEE 78 (93)
T ss_pred CccccCHHHHHHHhCCC--CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHhc
Q FD01845373_000 128 VTKRVLSN 135 (214)
Q Consensus 128 ~~kri~~k 135 (214)
.+..+.-+
T Consensus 79 k~~~ms~~ 86 (93)
T F8KTN8_HELBC/2 79 ATKEHSPD 86 (93)
T ss_pred HHHhCCHH
No 81
>6TGJ_A Ribonuclease M5; RNase M5, RNase, rRNA, 5S rRNA, precursor rRNA, pre-5S rRNA, ribosomal RNA, ribonuclease, novel fold, RNA-binding; 1.5A {Geobacillus stearothermophilus}
Probab=23.60 E-value=3.3e+02 Score=21.49 Aligned_cols=65 Identities=9% Similarity=-0.008 Sum_probs=0.0 Template_Neff=7.100
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHH
Q FD01845373_000 59 NSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVT 129 (214)
Q Consensus 59 ~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~ 129 (214)
..||...|..-.|=+...-..|++..|+.-.+|+.|++.. ... -||+++=..+-+.+......+|
T Consensus 26 ~~dL~~lGL~G~~~S~~~R~~l~~~L~i~~~n~K~ll~~L--N~l----~it~ee~~~~l~~~~~~~~~~~ 90 (90)
T 6TGJ_A 26 FAELIEAGLVGGEMARRRRQRLGEELKIGYANGRQFHKRL--KVF----RISRDAFYAALAQVMREEAGDA 90 (90)
T ss_dssp HHHHHHTTCSSSHHHHHHHHHHHHHHTCCCCCHHHHHHHH--HHT----TCCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHcCCCCcchHHHHHHHHHHHhCCCCCCHHHHHHHH--HcC----CCCHHHHHHHHHHHHHHhhcCC
No 82
>6XFK_A Type 3 secretion system pilotin; pilotin, secretin, chaperone, type III secretion, PROTEIN TRANSPORT; HET: SO4; 1.85A {Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)}
Probab=23.47 E-value=1.5e+02 Score=22.76 Aligned_cols=48 Identities=13% Similarity=0.149 Sum_probs=0.0 Template_Neff=5.600
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCC
Q FD01845373_000 117 LFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRG 166 (214)
Q Consensus 117 LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrG 166 (214)
+|..-|..-...|..+.+.. ..-.. ....|..|+..++.|..|-.+.|
T Consensus 4 ~~~~~~~~~~~~v~tFl~~h-PeY~~-s~~~~~~Ld~ev~kv~~~~~~~~ 51 (68)
T 6XFK_A 4 MFCEKYKQTKEQALTFFQEH-PQYMR-SKEDEEQLMTEFKKVLLEPGSKN 51 (68)
T ss_dssp -CHHHHHHHHHHHHHHHHHS-THHHH-CHHHHHHHHHHHHHHHTSTTGGG
T ss_pred chhHHHHHHHHHHHHHHHHC-hhhcc-CHHHHHHHHHHHHHHHcCcccCC
No 83
>PF18908.4 ; DUF5663 ; Protein of unknown function (DUF5663)
Probab=23.04 E-value=4.2e+02 Score=19.70 Aligned_cols=68 Identities=12% Similarity=0.034 Sum_probs=0.0 Template_Neff=9.000
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccCCCHHHcCHHHHHHHHhheeCCCCCcccHHHHHHHHHhCHHHHH
Q FD01845373_000 109 LTRKQQHFLFKAVYKHQYEVTKRVLSNGVDIDNVRITANLDAFEQKIQDVLVDLTFRGDNSPRTRRYFINDLNECRQSFK 188 (214)
Q Consensus 109 IT~~QQ~~LF~~~Y~~~~~~~kri~~k~~~~~~Y~~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~iq~~~~~n~~~~~ 188 (214)
+|+++|..+...++.....++ +..-.+.|++.=++-+..+.=.++.+ .+.+..++.++++.+-
T Consensus 10 l~~e~k~~~~~~l~~~l~~ri--------------~~~i~~~L~~~~~~ef~~l~~~~~~~---~~~~~~fl~~~ipd~~ 72 (86)
T F9PKR9_9ACTO/1 10 LGEEDARGLVARVYSELELRV--------------GKRLCAALSDAEIEEFADIVDEPESG---EIASAVWLEAHCPNYR 72 (86)
T ss_pred CCHHHHHHHHHHHHHHHHHHH--------------HHHHHHcCCHHHHHHHHHHHhCCCch---HHHHHHHHHHhCCCHH
Q ss_pred HHHhc
Q FD01845373_000 189 NNISN 193 (214)
Q Consensus 189 ~~i~~ 193 (214)
.+|..
T Consensus 73 ~~i~~ 77 (86)
T F9PKR9_9ACTO/1 73 EVVDN 77 (86)
T ss_pred HHHHH
No 84
>3QZC_B Periplasmic protein CpxP; alpha-helical hairpin, LTXXQ motif, stress response regulator, SIGNALING PROTEIN; 2.85A {Escherichia coli}
Probab=22.81 E-value=5e+02 Score=19.46 Aligned_cols=69 Identities=13% Similarity=0.131 Sum_probs=0.0 Template_Neff=10.600
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHH
Q FD01845373_000 55 ETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKR 131 (214)
Q Consensus 55 ~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kr 131 (214)
..++...|.... ++.+.+..+....+-.-.....-...+...+. ..+|++|+..+....-........+
T Consensus 44 ~~~l~~~~~~~~-----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Lt~eQ~~~~~~~~~~~~~~~~~~ 112 (117)
T 3QZC_B 44 LETMHRLVTAEN-----FDENAVRAQAEKMANEQIARQVEMAKVRNQMY---RLLTPEQQAVLNEKHQQRMEQLRDV 112 (117)
T ss_dssp HHHHHHHHTCSS-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHHHHHHHHH
No 85
>PF07345.15 ; ATPaseInh_sub_z ; ATPase inhibitor subunit zeta
Probab=22.81 E-value=1.9e+02 Score=23.31 Aligned_cols=22 Identities=23% Similarity=0.398 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred HHHHHHhhcCCCHHHHHHHHHh
Q FD01845373_000 76 LKKWLLGSVGKQGASALTHCNK 97 (214)
Q Consensus 76 ~a~~ls~aaGl~G~~A~~fv~~ 97 (214)
.+.|.+...||+|.+|..|...
T Consensus 33 lg~Waa~~lgl~~~~a~~Ya~~ 54 (102)
T E0TGL0_PARBH/1 33 VGKWAADLLGLSGEDAEAYAKA 54 (102)
T ss_pred HHHHHHHHhCCCHHHHHHHHHH
No 86
>2NP5_D Transcriptional regulator; tetR family, transcriptional regulator, structural genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG; HET: LMT, NDS, MSE; 1.8A {Rhodococcus sp.} SCOP: a.4.1.9, a.121.1.1
Probab=22.79 E-value=5.4e+02 Score=19.66 Aligned_cols=121 Identities=13% Similarity=0.115 Sum_probs=0.0 Template_Neff=13.000
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhc
Q FD01845373_000 56 TYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSN 135 (214)
Q Consensus 56 ~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k 135 (214)
....+.|..-| +..-....|++.+|.+...-..+..+....+. .++......+......+...
T Consensus 16 ~aa~~l~~~~g-----~~~~s~~~ia~~agvs~~t~y~~f~~k~~l~~------------~~~~~~~~~~~~~~~~~~~~ 78 (203)
T 2NP5_D 16 AALFDVAAESG-----LEGASVREVAKRAGVSIGAVQHHFSTKDEMFA------------FALRTLVDKLLARLSEVERG 78 (203)
T ss_dssp HHHHHHHHHHC-----C-------------------------CHHHHH------------HHHHHHHHHHHHHHHGGGGT
T ss_pred HHHHHHHHHhC-----CccCCHHHHHHHHCCCHHHHHHHcCCHHHHHH------------HHHHHHHHHHHHHHHHHhcC
Q ss_pred ccchhhcc----cCCCHHHcCHHHHHHHHhheeCCCCCcccHHHHHHHHHhCHHHHHHHHhc
Q FD01845373_000 136 GVDIDNVR----ITANLDAFEQKIQDVLVDLTFRGDNSPRTRRYFINDLNECRQSFKNNISN 193 (214)
Q Consensus 136 ~~~~~~Y~----~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~iq~~~~~n~~~~~~~i~~ 193 (214)
.+...... ..+.+..-++....++.-+.......+..++.+......-...+...+..
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (203)
T 2NP5_D 79 GDPARALFAAMSQLLPLDEARSREAHVMAAFAVRAATSPSLAEIRRKTLFTIRTGLSAVLIG 140 (203)
T ss_dssp CCHHHHHHHHHGGGSCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCcchhchhhHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHhc
No 87
>6AYH_A TetR family transcriptional regulator; Transcriptional Repressor Protein, Glucuronide Binding Protein, DNA Binding Protein, TRANSCRIPTION; HET: C3G, GOL, MSE; 2.05A {Salmonella choleraesuis}
Probab=22.20 E-value=5.6e+02 Score=19.62 Aligned_cols=120 Identities=10% Similarity=0.078 Sum_probs=0.0 Template_Neff=12.900
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhc
Q FD01845373_000 56 TYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSN 135 (214)
Q Consensus 56 ~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k 135 (214)
....+.+..-| +..-....|++.+|.+-..-..+..+....+. .++...+..+..........
T Consensus 20 ~aa~~l~~~~g-----~~~~t~~~ia~~agvs~~~~y~~F~~k~~l~~------------~~~~~~~~~~~~~~~~~~~~ 82 (201)
T 6AYH_A 20 RAARQCFAENG-----FHSTSMKTICKASDMSPGTLYHHFPSKEALIE------------AIILEDQERALTHFREPLEG 82 (201)
T ss_dssp HHHHHHHHHHC-----TTTCCHHHHHHHHTCCHHHHHHHCSSHHHHHH------------HHHHHHHHHHHHHHSSCCCS
T ss_pred HHHHHHHHHhC-----CccCCHHHHHHHcCCChHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHhhhccCC
Q ss_pred ccchhhcc-cCCCHHHcCHHHHHHHHhheeCCCCCcccHHHHHHHHHhCHHHHHHHHh
Q FD01845373_000 136 GVDIDNVR-ITANLDAFEQKIQDVLVDLTFRGDNSPRTRRYFINDLNECRQSFKNNIS 192 (214)
Q Consensus 136 ~~~~~~Y~-~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~iq~~~~~n~~~~~~~i~ 192 (214)
........ ..+.+-.-...-..++.-+.......|..++.+......-...+...+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 140 (201)
T 6AYH_A 83 VGLVDYLVESTIAVTREDYAQRALVVEIMAEGMRNPQVAEMLTNKYHTIIASLVARFN 140 (201)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHhhhcHHhHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHH
No 88
>3ZG1_C NICKEL AND COBALT RESISTANCE PROTEIN CNRR; METAL BINDING PROTEIN, SENSOR PROTEIN, SIGNAL TRANSDUCTION; HET: PEG, GOL, PGE; 1.85A {CUPRIAVIDUS METALLIDURANS}
Probab=21.68 E-value=4.1e+02 Score=19.83 Aligned_cols=65 Identities=5% Similarity=-0.138 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHH
Q FD01845373_000 55 ETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYE 127 (214)
Q Consensus 55 ~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~ 127 (214)
..++...+..-. .+++.+..+.....-.......-...+...+. ..+|++|+.++.+.+-.....
T Consensus 81 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Lt~eQ~~~~~~~~~~~~~~ 145 (148)
T 3ZG1_C 81 NGKLADAIAKNP-----AWSPEVEAATQEVERAAGDLQRATLVHVFEAR---AGLKPEHRPAYDRVLIDALRR 145 (148)
T ss_dssp HHHHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTSCTTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCC-----CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCHHHHHHHHHHHHHHHHh
No 89
>2GFN_B HTH-type transcriptional regulator pksA related protein; hth-type transcriptional regulator, transcriptional regulator tetr, PSI-2, Regulatory protein, Structural Genomics, Protein Structure Initiative, Midwest Center; HET: MSE; 1.9A {Rhodococcus sp.} SCOP: a.4.1.9, a.121.1.1
Probab=21.58 E-value=5.9e+02 Score=19.59 Aligned_cols=120 Identities=12% Similarity=0.065 Sum_probs=0.0 Template_Neff=13.000
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhc
Q FD01845373_000 56 TYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSN 135 (214)
Q Consensus 56 ~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k 135 (214)
......|..-| +..-....|++.+|.+...-..+..+-...+. .++......+..........
T Consensus 16 ~aa~~l~~~~g-----~~~~s~~~ia~~agvs~~~~y~~F~~k~~L~~------------~~~~~~~~~~~~~~~~~~~~ 78 (209)
T 2GFN_B 16 DAVLALIAREG-----ISAVTTRAVAEESGWSTGVLNHYFGSRHELLL------------AALRRAGDIQGDRYRTILDE 78 (209)
T ss_dssp HHHHHHHHHHC-----GGGCCHHHHHHHHCCCHHHHHHHCSSHHHHHH------------HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHC-----cccCCHHHHHHHHCCCHHHHHHHcCCHHHHHH------------HHHHHHHHHHHHHHHHHHHH
Q ss_pred c--cchhhcc----cCCCHHHcCHHHHHHHHhheeCCCCCcccHHHHHHHHHhCHHHHHHHHh
Q FD01845373_000 136 G--VDIDNVR----ITANLDAFEQKIQDVLVDLTFRGDNSPRTRRYFINDLNECRQSFKNNIS 192 (214)
Q Consensus 136 ~--~~~~~Y~----~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~iq~~~~~n~~~~~~~i~ 192 (214)
. +...... ..++|-.-++....++..+...+...+..++.+......-...+...+.
T Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 141 (209)
T 2GFN_B 79 EGAGPIEKLRNITASILPLDERRLAMTRVFLFFYAEGAAEETARGEIAAFLARWRGVVRESVV 141 (209)
T ss_dssp TTCCHHHHHHHHHHTTSCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHhhcCCchhcHhhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHH
No 90
>2NX4_C Transcriptional regulator, TetR family protein; tetR, HTH DNA binding motif, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics; 1.7A {Rhodococcus sp. RHA1}
Probab=21.47 E-value=5.7e+02 Score=19.38 Aligned_cols=120 Identities=8% Similarity=0.021 Sum_probs=0.0 Template_Neff=13.000
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhc
Q FD01845373_000 56 TYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKRVLSN 135 (214)
Q Consensus 56 ~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kri~~k 135 (214)
....+.+..-| +..-....|++.+|++...-..+..+-...+. .+++.....+..........
T Consensus 17 ~a~~~l~~~~g-----~~~~s~~~ia~~ag~s~~~~y~~f~~k~~l~~------------~~~~~~~~~~~~~~~~~~~~ 79 (194)
T 2NX4_C 17 AAAWRLIAARG-----IEAANMRDIATEAGYTNGALSHYFAGKDEILR------------TSYEHISEATDRRIAEALGD 79 (194)
T ss_dssp HHHHHHHHHHC-----TTTCCHHHHHHHHTCCHHHHHTTCSSHHHHHH------------HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHC-----cccccHHHHHHHhCCCHHHHHHhcCCHHHHHH------------HHHHHHHHHHHHHHHHHhCC
Q ss_pred ccchhhcc----cCCCHHHcCHHHHHHHHhheeCCCCCcccHHHHHHHHHhCHHHHHHHHh
Q FD01845373_000 136 GVDIDNVR----ITANLDAFEQKIQDVLVDLTFRGDNSPRTRRYFINDLNECRQSFKNNIS 192 (214)
Q Consensus 136 ~~~~~~Y~----~~~~W~~L~~~IkdvlVDL~YrGDyt~~tR~~iq~~~~~n~~~~~~~i~ 192 (214)
.+...... ..+.+-.-++....++..+.......+..+..+......-...+..++.
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 140 (194)
T 2NX4_C 80 ATGLDALRILCREVMPINEEQLLEARIAASLWPRAMYDEQMAATNRRTMDNWREQMAIFLE 140 (194)
T ss_dssp CCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHcccCHHHhHHHHHHHhHhhHhcCCHHHHHHHHHHHHHHHHHHHHHHH
No 91
>7VZG_D PscD'; membrane protein, PHOTOSYNTHESIS; HET: 85I, LYC, 2GO, CLA, SF4, UNL, 84Q, BCL, HEC, 85N; 2.61A {Chloracidobacterium thermophilum}
Probab=21.40 E-value=3.3e+02 Score=21.10 Aligned_cols=37 Identities=14% Similarity=0.203 Sum_probs=0.0 Template_Neff=1.000
Q ss_pred HHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHH
Q FD01845373_000 89 ASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVT 129 (214)
Q Consensus 89 ~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~ 129 (214)
..|.-|+..-+..++ --..+.|+.+|..-|.+.....
T Consensus 13 keaniwlrhwkqqig----lakdeeqremftqyyeervqei 49 (70)
T 7VZG_D 13 KEANIWLRHWKQQIG----LAKDEEQREMFTQYYEERVQEI 49 (70)
T ss_dssp HHHHHHHHHHHHHHH----HCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc----CCCcHHHHHHHHHHHHHHHHHH
No 92
>8GUG_C DUF2384 domain-containing protein; Complex, Toxin, Antitoxin; 2.85A {Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)}
Probab=21.04 E-value=3.5e+02 Score=22.34 Aligned_cols=67 Identities=4% Similarity=-0.002 Sum_probs=0.0 Template_Neff=9.100
Q ss_pred CCCCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccc---cCCHHHHHHHHHHH
Q FD01845373_000 50 LGQQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQ---LLTRKQQHFLFKAV 121 (214)
Q Consensus 50 mg~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~---eIT~~QQ~~LF~~~ 121 (214)
+|.-....-...+.+.| ++......|+...|++.......+.-....+..-.. .++++++.+|+..+
T Consensus 23 ~~~~~~~~~~~~~~~~g-----~~~~~~~~l~~~~~ls~~e~a~~lgvs~~t~~~~~~~~~~l~~~~~~rl~~l~ 92 (150)
T 8GUG_C 23 LGIEDAETGRTDAVHKG-----FEPKVYRNIVERVKLSQNEFQNVTLIPVSTIKRRLKNDERFNTQESDAIYRLA 92 (150)
T ss_dssp CGGGTSCC-CHHHHHHC-----BCHHHHHHHHHHTTCCHHHHHHHHCCCHHHHHHHHHSSCCBCHHHHHHHHHHH
T ss_pred hCCCCChhhHHHHHHcC-----CCHHHHHHHHHHhCCCHHHHHHHhCCCHHHHHHHHhcCCCCCHHHHHHHHHHH
No 93
>4OVT_A TRAP dicarboxylate transporter, DctP subunit; TRAP PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INITIATIVE, EFI, Structural Genomics, SOLUTE-BINDING PROTEIN; HET: LFC, MSE; 1.8A {Ochrobactrum anthropi} SCOP: c.94.1.0
Probab=20.94 E-value=1.7e+02 Score=26.20 Aligned_cols=64 Identities=11% Similarity=0.194 Sum_probs=0.0 Template_Neff=10.800
Q ss_pred HHHcCHHHHHHHHhh-----eeCCCCCcccHHHHHHHHHhC--------HHHHHHHHhcc--cchhccCCCchHHHHHHH
Q FD01845373_000 148 LDAFEQKIQDVLVDL-----TFRGDNSPRTRRYFINDLNEC--------RQSFKNNISNT--HWLTAFSVPRARFNARKD 212 (214)
Q Consensus 148 W~~L~~~IkdvlVDL-----~YrGDyt~~tR~~iq~~~~~n--------~~~~~~~i~~~--~W~~~~~Vp~dRf~rR~~ 212 (214)
|++||+.+|.++.+. .+-.++.....+.....+.+. .+.+.+.+... .|. ....+-+++-.+
T Consensus 245 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 321 (324)
T 4OVT_A 245 FSTLPEDQLKMIHESAYDAGLYSQKLTIEKDNEMIEKMKEAGVEIIDVDRAPFKALAEKVYTQFP---EWSPGLYDKIKA 321 (324)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCEEECCCCHHHHHHHGGGGGSCT---TSCTTHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEcChHHHHHHHHHHHHHCc---ccChhHHHHHHH
Q ss_pred hC
Q FD01845373_000 213 YL 214 (214)
Q Consensus 213 yL 214 (214)
+|
T Consensus 322 ~l 323 (324)
T 4OVT_A 322 EL 323 (324)
T ss_dssp HH
T ss_pred Hh
No 94
>7TJL_A De novo designed protein, SEWN0.1; binder, G protein, DE NOVO PROTEIN; 1.87A {synthetic construct}
Probab=20.70 E-value=4.6e+02 Score=21.37 Aligned_cols=39 Identities=23% Similarity=0.294 Sum_probs=0.0 Template_Neff=1.000
Q ss_pred HHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHHHHHHHHHHHHHHHHHHH
Q FD01845373_000 75 SLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQHFLFKAVYKHQYEVTKR 131 (214)
Q Consensus 75 ~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ~~LF~~~Y~~~~~~~kr 131 (214)
+.|.+..+.-|..|+.|.+-|+.. +|+.+|..+....+.
T Consensus 54 ekaakyiktygfrgqeaydqvkke------------------mfeklykyfmeklks 92 (93)
T 7TJL_A 54 EKAAKYIKTYGFRGQEAYDQVKKE------------------MFEKLYKYFMEKLKS 92 (93)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhCccchHHHHHHHHH------------------HHHHHHHHHHHHHhc
No 95
>8F2R_B COMM domain-containing protein 2; endosomal sorting, commander, CCC complex, ENDOCYTOSIS; 3.12A {Homo sapiens}
Probab=20.61 E-value=4.4e+02 Score=22.22 Aligned_cols=50 Identities=16% Similarity=0.111 Sum_probs=0.0 Template_Neff=10.200
Q ss_pred CCCHHHHHHHHHHhhhcCCCCCHHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCC
Q FD01845373_000 52 QQTETYINSLFQEMEKDAKPLSDSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLT 110 (214)
Q Consensus 52 ~rs~~~i~~dL~~aG~~~~pi~~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT 110 (214)
..+.+++...|...| ++++.+..+++..+..+......+..+....+ .+.
T Consensus 76 ~~~~~~l~~~L~~~g-----l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~----~l~ 125 (199)
T 8F2R_B 76 MISELDFQDSVFVLG-----FSEELNKLLLQLYLDNRKEIRTILSELAPSLP----SYH 125 (199)
T ss_pred CCCHHHHHHHHHHcC-----CCHHHHHHHHHHHHHcHHHHHHHHHHhCCCCC----ccc
No 96
>2Y9J_q LIPOPROTEIN PRGK; PROTEIN TRANSPORT, TYPE III SECRETION, IR1, INNER MEMBRANE RING, C24-FOLD; 6.4A {SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM}
Probab=20.33 E-value=3.8e+02 Score=22.87 Aligned_cols=82 Identities=6% Similarity=0.090 Sum_probs=0.0 Template_Neff=8.700
Q ss_pred cCCCCCHHHHHHHHHHhhhcCCCCC--------------HHHHHHHHhhcCCCHHHHHHHHHhccccCCcccccCCHHHH
Q FD01845373_000 49 DLGQQTETYINSLFQEMEKDAKPLS--------------DSLKKWLLGSVGKQGASALTHCNKIDNEVPKNEQLLTRKQQ 114 (214)
Q Consensus 49 Dmg~rs~~~i~~dL~~aG~~~~pi~--------------~~~a~~ls~aaGl~G~~A~~fv~~~~~~~~~~~~eIT~~QQ 114 (214)
+|......+|...|..+|+.++-.. ...|.......||.......|-.-....-. ..|+.++
T Consensus 6 ~l~~~e~~~i~~~L~~~gI~~~~~~~~~~g~~I~Vp~~~~~~a~~~L~~~glp~~~~~~~~~~~~~~~~----~~t~~~~ 81 (170)
T 2Y9J_q 6 GLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPRPRVEIAQMFPADSL----VSSPRAE 81 (170)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEEECTTSCEEEEECGGGHHHHHHHHHHTTCSCCCCCCTTCCTTTCSC----CCSHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCcEEeeCCCCceEEEEeHHHHHHHHHHHHHCCCCCCCCCCHHHhCCCCCC----CCCHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q FD01845373_000 115 HFLFKAVYKHQYEVTKRVLS 134 (214)
Q Consensus 115 ~~LF~~~Y~~~~~~~kri~~ 134 (214)
+..+...-....+...+-+.
T Consensus 82 ~~~~~~a~~~el~~~i~~~~ 101 (170)
T 2Y9J_q 82 KARLYSAIEQRLEQSLQTME 101 (170)
T ss_dssp HHHHHHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHHHHHHHHhcCC
No 97
>PF09077.15 ; Phage-MuB_C ; Mu B transposition protein, C terminal
Probab=20.15 E-value=3.7e+02 Score=19.33 Aligned_cols=41 Identities=22% Similarity=0.289 Sum_probs=0.0 Template_Neff=9.500
Q ss_pred eCccccCCCCCHHHHHHHHHHhhhcCCCC---CHHHHHHHHhhcCCCHH
Q FD01845373_000 44 FGRGLDLGQQTETYINSLFQEMEKDAKPL---SDSLKKWLLGSVGKQGA 89 (214)
Q Consensus 44 IGRGYDmg~rs~~~i~~dL~~aG~~~~pi---~~~~a~~ls~aaGl~G~ 89 (214)
||.-++++..+.++|...+...| + +++.+..|.+.+...|.
T Consensus 3 i~~~~~~~~~~~~Dv~~i~~~~~-----~~~~~~~~~~~l~~~~~~~G~ 46 (80)
T Q7VPI3_HAEDU/2 3 IGKKCQIKASKKGDIKAVAQAWG-----LDVQDKDLMTVLYDIGGKAGG 46 (80)
T ss_pred cccccccCCCCHHHHHHHHHHcC-----CCCCCHHHHHHHHHHhcCCCh
No 98
>PF21763.1 ; DHH_CID ; DHH-CID domain
Probab=20.02 E-value=4.8e+02 Score=19.88 Aligned_cols=43 Identities=12% Similarity=0.217 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred CCCH--HHHHHHHHhccccCC-----cccccCCHHHHHHHHHHHHHHHHH
Q FD01845373_000 85 GKQG--ASALTHCNKIDNEVP-----KNEQLLTRKQQHFLFKAVYKHQYE 127 (214)
Q Consensus 85 Gl~G--~~A~~fv~~~~~~~~-----~~~~eIT~~QQ~~LF~~~Y~~~~~ 127 (214)
|++| +.|.+|++....... +.-.+++.++..+|...+...+..
T Consensus 23 gltg~~~~~~~~L~~~gi~~~~~~~~~~~~dL~~ee~~~L~~~l~~~l~~ 72 (84)
T A0A1Q1FJ83_9EU 23 GISNDQNGAIRFLDGLGLDLKRDGEWRRWVDLSHEERQTVASSLVQHAIE 72 (84)
T ss_pred CcCCCHHHHHHHHHHcCCCcccCCceeeHHHCCHHHHHHHHHHHHHHHHH