Query         FD01848354_04494 hypothetical protein
Match_columns 126
No_of_seqs    108 out of 116
Neff          4.6691
Searched_HMMs 86581
Date          Tue Feb 27 19:06:36 2024
Command       hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/5477217.hhr -oa3m ../results/5477217.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf 
 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 7RT7_K RhsP2; Type Six Secreti 100.0 2.6E-33   3E-38  206.4   9.4  121    1-126    25-155 (155)
  2 7ZHL_A RHS repeat protein; bac  88.4     2.5 2.9E-05   29.7   4.9   50    1-50      3-59  (116)
  3 1X7V_C PA3566 protein; structu  38.0      89   0.001   18.6   2.9   18   44-61      9-26  (99)
  4 6X6X_A ADP-ribosyltransferase;  36.8   1E+02  0.0012   25.9   3.9   51    4-54     97-171 (420)
  5 PF08803.15 ; ydhR ; Putative m  34.2      86   0.001   21.1   2.6   18   44-61      2-19  (98)
  6 PF16462.9 ; Phage_TAC_14 ; Pha  33.2   1E+02  0.0012   22.1   2.9   19    1-19     20-38  (113)
  7 2PD1_B Hypothetical protein; u  31.9 1.2E+02  0.0014   18.4   2.9   18   44-61      8-25  (104)
  8 2GFF_A LsrG Protein; dimeric a  29.6 1.4E+02  0.0016   18.7   2.8   18   44-61      4-21  (106)
  9 1Y0H_B hypothetical protein Rv  29.6 1.2E+02  0.0014   18.4   2.5   18   44-61      8-25  (102)
 10 1Q8B_A Protein yjcS; Structura  29.0 1.4E+02  0.0017   18.5   2.8   18   44-61     16-34  (105)
 11 3FGV_A uncharacterized protein  27.5 1.5E+02  0.0017   18.3   2.6   18   44-61     17-34  (106)
 12 2RIL_A Antibiotic biosynthesis  27.4 1.1E+02  0.0013   18.9   2.1   18   44-61      8-25  (99)
 13 3KKF_A Putative antibiotic bio  27.2 1.3E+02  0.0015   18.4   2.4   18   44-61      8-25  (105)
 14 8ECP_B Antibiotic biosynthesis  26.1 1.2E+02  0.0014   18.3   2.1   18   44-61      5-22  (102)
 15 2BBE_A hypothetical protein SO  25.9 1.8E+02  0.0021   17.7   2.8   18   44-61     16-33  (108)
 16 4ZOS_A protein YE0340 from Yer  25.6 1.7E+02   0.002   17.7   2.6   18   44-61     14-31  (106)
 17 3GZ7_B Putative antibiotic bio  25.0 1.8E+02  0.0021   19.0   2.9   18   44-61     23-40  (115)
 18 6FXD_B MupZ; epoxide hydrolase  24.6 1.4E+02  0.0016   22.0   2.5   18   44-61     26-43  (141)
 19 2FB0_A conserved hypothetical   24.4   2E+02  0.0023   16.8   2.7   18   44-61      7-24  (94)
 20 3HX9_B Protein Rv3592; di-heme  24.0 1.9E+02  0.0022   19.5   2.9   18   44-61      5-22  (124)
 21 PF11961.12 ; DUF3475 ; Domain   24.0      99  0.0011   20.9   1.5   32    6-37     17-48  (57)
 22 3BM7_A Protein of unknown func  23.6 1.8E+02   0.002   19.0   2.6   18   44-61     23-40  (115)
 23 6DS7_B Heme-degrading monooxyg  23.6 1.8E+02  0.0021   17.9   2.6   18   44-61      4-21  (99)
 24 4HL9_G Antibiotic biosynthesis  22.8 1.7E+02  0.0019   19.1   2.4   18   44-61     26-43  (118)
 25 PF15636.10 ; Tox-GHH ; GHH sig  22.7   3E+02  0.0034   18.0   3.5   42    7-48     34-76  (78)
 26 1SQE_B hypothetical protein PG  22.5 2.2E+02  0.0025   18.4   2.8   18   44-61      5-22  (109)
 27 PF10126.13 ; Nit_Regul_Hom ; U  21.0      65 0.00075   25.1   0.2   13    6-18     34-46  (107)
 28 8AVH_A Heme-degrading monooxyg  20.9 2.4E+02  0.0028   17.8   2.8   18   44-61      4-21  (107)
 29 2OB9_B Tail assembly chaperone  20.8 2.3E+02  0.0026   20.7   2.9   19    1-19     30-48  (130)
 30 1LQ9_B ACTVA-ORF6 MONOOXYGENAS  20.2 2.2E+02  0.0025   18.2   2.5   18   44-61     12-30  (112)
 31 4DN9_B Antibiotic biosynthesis  20.1 2.3E+02  0.0027   18.8   2.7   18   44-61     26-43  (122)
No 1
>7RT7_K RhsP2; Type Six Secretion System, Effector, Immunity, ADP-ribosyl transferase, RNA, Translation, Complex, TOXIN-ANTITOXIN complex; HET: TRS; 2.49A {Pseudomonas aeruginosa (strain UCBPP-PA14)}
Probab=100.00  E-value=2.6e-33  Score=206.43  Aligned_cols=121  Identities=41%  Similarity=0.703  Sum_probs=116.3  Template_Neff=8.800
Q ss_pred             CCeeEEecCCHHHHHHHHHhCCCCCCCcceecCChHHHhhCCeEEEEEEecCChHHHHHHhcccCCCcchHHHCCCCCCC
Q FD01848354_044    1 EAEIFYRTMSEDNYATLQSTGRMPGTTETTISPTRVFSEAYDGVLVKFNMKSGTQKSLENIGIRDGSKLTEVMYPDMPSP   80 (126)
Q Consensus         1 ~~EifYRtMS~~~~~~L~~tG~l~~t~ETfiSp~~~ys~~Y~GvlV~f~~kpGT~~~L~~iGv~~~s~~~~~~~p~mP~~   80 (126)
                      ++|+|||+||++||+.|..+|.+|+++||++||...|+.+|+|++|+|.++|||.+.|..||+.+++.... .||+||  
T Consensus        25 ~~e~~yr~~s~~~~~~l~~t~~l~~t~et~~sp~~~y~~~y~g~~v~~~~~~gt~~~l~~iG~~~~~~~~~-~~~~~~--  101 (155)
T 7RT7_K           25 GNEIYYRTLSEQHLEILRNNFEVPPTSETFISPLQSYSQEYDGKLVRLTASPGTMNELSKIGVTANSGTGL-LLPDLP--  101 (155)
T ss_dssp             SCEEEEEEECHHHHHHHHHHCCCCCCTTCEEBSCHHHHTTSSSEEEEEEECTTHHHHHHHTEEECTTCCSS-SCCSSC--
T ss_pred             CCeEEEEeCCHHHHHHHHhcCCCCCCCcceecCchhccceeCceEEEEEecCCchhceeeeeeecCCCccc-ccCCCC--
Confidence            47999999999999999999999999999999999999999999999999999999999999999887776 499999  
Q ss_pred             CCCCCcccccEEEEEcC----------CeeeecCCccCchHHHHhhhccceEEEcC
Q FD01848354_044   81 TKTKGWGYNYARFKGEG----------EQINIGLGKEGGNALKVFNDGIDSYEVVR  126 (126)
Q Consensus        81 ~~~~gW~~~~a~fK~Eg----------gqinigLG~~~G~al~iFN~nI~~f~~i~  126 (126)
                      ...++|..++++||.|+          ++||||||+  |+||+|||+||++|++|+
T Consensus       102 ~~~~~w~~~~~~fk~e~~~~~~~~~~~~~~ni~lg~--g~~l~ifN~ni~~~~~i~  155 (155)
T 7RT7_K          102 PARKGWKQNNALFKLEALKKPTINEGGGVINTGLGD--GKALEIFNKNLIDFEVID  155 (155)
T ss_dssp             BCCTTHHHHCEEEEEECTTCTTTGGGTCEEEEECCS--SHHHHHHHHHEEEEEEEC
T ss_pred             CCCCCccccceeecccccCCCcccCCCCceeccCCC--chHHHHHhhccceeEEcC
Confidence            99999999999999999          999999999  999999999999999874
No 2
>7ZHL_A RHS repeat protein; bacterial toxin, secreted toxin, T6SS, ADP-ribosyltransferase, translation inhibitor, TOXIN; 2.2A {Salmonella enterica subsp. enterica serovar Typhimurium}
Probab=88.43  E-value=2.5  Score=29.71  Aligned_cols=50  Identities=20%  Similarity=0.339  Sum_probs=0.0  Template_Neff=9.600
Q ss_pred             CCeeEEecCCHHHHHHHHHhCCCC--CCCccee---cCChHHHhhC--CeEEEEEEe
Q FD01848354_044    1 EAEIFYRTMSEDNYATLQSTGRMP--GTTETTI---SPTRVFSEAY--DGVLVKFNM   50 (126)
Q Consensus         1 ~~EifYRtMS~~~~~~L~~tG~l~--~t~ETfi---Sp~~~ys~~Y--~GvlV~f~~   50 (126)
                      ....+.|.||.++|+.+..+|++.  .++.|++   +...+|...+  ..+-|+|.+
T Consensus         3 ~~~~vgr~ms~~e~~~m~~tg~v~~~~~g~t~v~~~~~~~~~~~~~~~g~~~vefdv   59 (116)
T 7ZHL_A            3 STATVGRWMGPAEYQQMLDTGTVVQSSTGTTHVAYPADIDAFGKQAKNGAMYVEFDV   59 (116)
T ss_dssp             CEEEEEEEECHHHHHHHHHHTBCCCCTTSEEEEBSSCCTTSSTTTSCTTCEEEEEEE
T ss_pred             cceeeccccCHHHHHHHHhhCCeeecCCCceeeecCcChhhhhhhccCCceEEEeec
No 3
>1X7V_C PA3566 protein; structural genomics, protein structure initiative, Midwest Center for Structural Genomics, alpha-beta plait, PSI, MCSG, UNKNOWN FUNCTION; HET: MSE; 1.78A {Pseudomonas aeruginosa} SCOP: l.1.1.1, d.58.4.11
Probab=38.05  E-value=89  Score=18.56  Aligned_cols=18  Identities=17%  Similarity=0.357  Sum_probs=0.0  Template_Neff=13.000
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.+.|.++||..+.+.+.
T Consensus         9 ~~~~~~~~~~~~~~~~~~   26 (99)
T 1X7V_C            9 LIATITAAPGHAEALERE   26 (99)
T ss_dssp             EEEEEEECTTCHHHHHHH
T ss_pred             EEEEEEECCCCHHHHHHH
No 4
>6X6X_A ADP-ribosyltransferase; RIBOSYLTRANSFERASE, CDTA, TOXIN, TRANSFERASE; HET: UTG; 1.71A {Clostridioides difficile} SCOP: d.166.1.1, d.166.1.0
Probab=36.82  E-value=1e+02  Score=25.90  Aligned_cols=51  Identities=10%  Similarity=0.159  Sum_probs=0.0  Template_Neff=10.900
Q ss_pred             eEEec-------------------CCHHHHHHHH---HhCCCCCCC--cceecCChHHHhhCCeEEEEEEecCCh
Q FD01848354_044    4 IFYRT-------------------MSEDNYATLQ---STGRMPGTT--ETTISPTRVFSEAYDGVLVKFNMKSGT   54 (126)
Q Consensus         4 ifYRt-------------------MS~~~~~~L~---~tG~l~~t~--ETfiSp~~~ys~~Y~GvlV~f~~kpGT   54 (126)
                      +.||.                   |+.++++.|+   ..+.+.-.+  .|++++..+.+.....|++++.+.+||
T Consensus        97 ~vyr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~f~sts~~~~~~~~~~~~~v~~~i~~p~g~  171 (420)
T 6X6X_A           97 YVYYFESPEKFAFNKVIRTENQNEISLEKFNEFKETIQNKLFKQDGFKDISLYEPGKGDEKPTPLLMHLKLPRNT  171 (420)
T ss_dssp             EEEEEECGGGGTCCSCSSCTTCCCCCHHHHHHHHHHHTTCCEEEEEEEEEBSSCCCTTSCCCSSEEEEEEECTTC
T ss_pred             EEEEEcCHHHhcCCcccccCCCCccCHHHHHHHHHHhCCCccccccceeeeccCCCCCCCCCCCEEEEEEcCCCC
No 5
>PF08803.15 ; ydhR ; Putative mono-oxygenase ydhR
Probab=34.19  E-value=86  Score=21.11  Aligned_cols=18  Identities=11%  Similarity=0.182  Sum_probs=0.0  Template_Neff=9.900
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.|+|.++||..+.+.+.
T Consensus         2 ~~v~~~~~~~~~~e~~~~   19 (98)
T C1D9W2_LARHH/6    2 LQIDFDYAGPWGADLAAA   19 (98)
T ss_pred             EEEEEecCCCCHHHHHHH
No 6
>PF16462.9 ; Phage_TAC_14 ; Phage tail assembly chaperone protein, TAC
Probab=33.18  E-value=1e+02  Score=22.06  Aligned_cols=19  Identities=16%  Similarity=0.316  Sum_probs=0.0  Template_Neff=8.900
Q ss_pred             CCeeEEecCCHHHHHHHHH
Q FD01848354_044    1 EAEIFYRTMSEDNYATLQS   19 (126)
Q Consensus         1 ~~EifYRtMS~~~~~~L~~   19 (126)
                      |.++|.|.||..++..+..
T Consensus        20 g~~v~vr~lt~~e~~~~~~   38 (113)
T T0P6Z0_PHOTE/3   20 GTKVNLRRMTASELMDLEE   38 (113)
T ss_pred             CcEEEEEeCCHHHHHHHHH
No 7
>2PD1_B Hypothetical protein; unknown function, NE2512 protein, structural genomics, APC7253, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics; HET: ACT, MSE; 1.86A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=31.90  E-value=1.2e+02  Score=18.40  Aligned_cols=18  Identities=22%  Similarity=0.591  Sum_probs=0.0  Template_Neff=12.700
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.++|.++||..+.+.++
T Consensus         8 ~~~~~~~~~~~~~~~~~~   25 (104)
T 2PD1_B            8 LFVRLEAKPGQEAALADF   25 (104)
T ss_dssp             EEEEEEBCTTCHHHHHHH
T ss_pred             EEEEEEeCCCcHHHHHHH
No 8
>2GFF_A LsrG Protein; dimeric alpha+beta barrel Ferredoxin fold, SUGAR BINDING PROTEIN; HET: MSE; 1.75A {Yersinia pestis} SCOP: d.58.4.0, l.1.1.1
Probab=29.59  E-value=1.4e+02  Score=18.72  Aligned_cols=18  Identities=22%  Similarity=0.392  Sum_probs=0.0  Template_Neff=12.200
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.++|+++||..+.+.+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~   21 (106)
T 2GFF_A            4 TLVEINVKEDKVDQFIEV   21 (106)
T ss_dssp             EEEEEEBCGGGHHHHHHH
T ss_pred             EEEEEEECcccHHHHHHH
No 9
>1Y0H_B hypothetical protein Rv0793; ferredoxin-like fold, alpha+beta sandwich with antiparallel beta-sheet, Structural Genomics, PSI, Protein Structure Initiative, TB Structural Genomics; HET: ACT; 1.6A {Mycobacterium tuberculosis} SCOP: d.58.4.11
Probab=29.56  E-value=1.2e+02  Score=18.39  Aligned_cols=18  Identities=17%  Similarity=0.460  Sum_probs=0.0  Template_Neff=12.700
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      ++++|.++||..+.+.+.
T Consensus         8 ~~~~~~~~~~~~~~~~~~   25 (102)
T 1Y0H_B            8 VIARFMPRPDARSALRAL   25 (102)
T ss_dssp             EEEEECBCGGGHHHHHHH
T ss_pred             EEEEEEeCHHHHHHHHHH
No 10
>1Q8B_A Protein yjcS; Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, Unknown Function; HET: MSE; 1.9A {Bacillus subtilis} SCOP: d.58.4.6
Probab=29.04  E-value=1.4e+02  Score=18.47  Aligned_cols=18  Identities=6%  Similarity=0.056  Sum_probs=0.0  Template_Neff=12.300
Q ss_pred             EEEEEEecCC-hHHHHHHh
Q FD01848354_044   44 VLVKFNMKSG-TQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpG-T~~~L~~i   61 (126)
                      +.++|+++|| ..+.+.++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~   34 (105)
T 1Q8B_A           16 ITACLKIISDKDLNEIMKE   34 (105)
T ss_dssp             EEEEEEECCCSCHHHHHHH
T ss_pred             EEEEEEECChhhHHHHHHH
No 11
>3FGV_A uncharacterized protein with ferredoxin-like fold; PHOSPHOSERINE AMINOTRANSFERASE SERC, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, OXIDOREDUCTASE; HET: UNL, EDO, MSE; 1.3A {Silicibacter pomeroyi DSS-3}
Probab=27.46  E-value=1.5e+02  Score=18.32  Aligned_cols=18  Identities=22%  Similarity=0.392  Sum_probs=0.0  Template_Neff=12.500
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.++|.++||..+.+.+.
T Consensus        17 ~~~~~~~~~~~~~~~~~~   34 (106)
T 3FGV_A           17 VIVKSTPQRGKFNAFAEL   34 (106)
T ss_dssp             EEEEECBCTTCHHHHHHH
T ss_pred             EEEEEEcCCCchHHHHHH
No 12
>2RIL_A Antibiotic biosynthesis monooxygenase; YP_001095275.1, Putative monooxygenase, Antibiotic biosynthesis monooxygenase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure; HET: MSE; 1.26A {Shewanella loihica}
Probab=27.45  E-value=1.1e+02  Score=18.87  Aligned_cols=18  Identities=6%  Similarity=0.167  Sum_probs=0.0  Template_Neff=12.200
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.+.|.++||..+.+.++
T Consensus         8 ~~~~~~~~~~~~~~~~~~   25 (99)
T 2RIL_A            8 LINPFKVPADKLEAAIEY   25 (99)
T ss_dssp             EEEEEBCCTTCHHHHHHH
T ss_pred             EEEeEEcCHHHHHHHHHH
No 13
>3KKF_A Putative antibiotic biosynthesis monooxygenase; Putative antibiotic biosynthesis monooxygenase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2; HET: P6G, MSE; 1.3A {Bacteroides thetaiotaomicron}
Probab=27.17  E-value=1.3e+02  Score=18.41  Aligned_cols=18  Identities=6%  Similarity=0.076  Sum_probs=0.0  Template_Neff=12.600
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.+.|.++||..+.+.++
T Consensus         8 ~~~~~~~~~~~~~~~~~~   25 (105)
T 3KKF_A            8 RLSRIIIDPERLEEYNAY   25 (105)
T ss_dssp             EEEEEEECGGGHHHHHHH
T ss_pred             EEEEEEECHHHHHHHHHH
No 14
>8ECP_B Antibiotic biosynthesis monooxygenase; glyoxal, CYTOSOLIC PROTEIN; HET: CME, ACT, GOL; 1.5A {Pseudomonas aeruginosa}
Probab=26.12  E-value=1.2e+02  Score=18.31  Aligned_cols=18  Identities=28%  Similarity=0.517  Sum_probs=0.0  Template_Neff=12.700
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.++|.++||..+.+.+.
T Consensus         5 ~~~~~~~~~~~~~~~~~~   22 (102)
T 8ECP_B            5 VLVQFDVPSDKAEAFAAA   22 (102)
T ss_dssp             EEEEEECCGGGHHHHHHH
T ss_pred             EEEEEECCHHHHHHHHHh
No 15
>2BBE_A hypothetical protein SO0527; MCSG, SO0527, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, UNKNOWN FUNCTION; HET: SO4; 1.97A {Shewanella oneidensis} SCOP: d.58.4.0
Probab=25.85  E-value=1.8e+02  Score=17.71  Aligned_cols=18  Identities=22%  Similarity=0.320  Sum_probs=0.0  Template_Neff=12.800
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.+.|.++|+..+.+.+.
T Consensus        16 ~~~~~~~~~~~~~~~~~~   33 (108)
T 2BBE_A           16 CVASFLSKEGKTEALIAA   33 (108)
T ss_dssp             EEEEEEECTTCHHHHHHH
T ss_pred             EEEEEEeCCCcHHHHHHH
No 16
>4ZOS_A protein YE0340 from Yersinia enterocolitica subsp. enterocolitica 8081; Yersinia enterocolitica subsp. enterocolitica 8081, hypothetical protein YE0340, Structural Genomics, CSGID, Center for Structural Genomics of; HET: PO4; 2.2A {Yersinia enterocolitica}
Probab=25.60  E-value=1.7e+02  Score=17.70  Aligned_cols=18  Identities=0%  Similarity=0.353  Sum_probs=0.0  Template_Neff=12.900
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.+.|.++||..+.+.+.
T Consensus        14 ~~~~~~~~~~~~~~~~~~   31 (106)
T 4ZOS_A           14 IICELRCEPENRERVKEL   31 (106)
T ss_dssp             EEEEEEECGGGHHHHHHH
T ss_pred             EEEEEEEChhhHHHHHHH
No 17
>3GZ7_B Putative antibiotic biosynthesis monooxygenase; NP_888398.1, Putative antibiotic biosynthesis monooxygenase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative; HET: CIT, MSE; 2.15A {Bordetella bronchiseptica}
Probab=25.05  E-value=1.8e+02  Score=19.01  Aligned_cols=18  Identities=11%  Similarity=0.217  Sum_probs=0.0  Template_Neff=11.500
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.++|.++||..+.+.+.
T Consensus        23 ~~~~~~v~~~~~~~~~~~   40 (115)
T 3GZ7_B           23 EIASILVQPGREADFEAG   40 (115)
T ss_dssp             EEEEEEBCTTCHHHHHHH
T ss_pred             EEEEEEECCCCHHHHHHH
No 18
>6FXD_B MupZ; epoxide hydrolase, BIOSYNTHETIC PROTEIN; 1.45A {Pseudomonas fluorescens}
Probab=24.63  E-value=1.4e+02  Score=21.95  Aligned_cols=18  Identities=6%  Similarity=0.198  Sum_probs=0.0  Template_Neff=9.300
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      ++++|.++||..+.++++
T Consensus        26 ~i~~~~vkp~~~~ef~~~   43 (141)
T 6FXD_B           26 AMPYFEIPERHLEAFKAY   43 (141)
T ss_dssp             EEEEEECCGGGHHHHHHH
T ss_pred             EEEEEEcChhhHHHHHHH
No 19
>2FB0_A conserved hypothetical protein; Conserved hypothetical protein, SAD, Bacteroides thetaiotaomicron, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural; HET: GOL, MSE; 2.1A {Bacteroides thetaiotaomicron}
Probab=24.44  E-value=2e+02  Score=16.85  Aligned_cols=18  Identities=6%  Similarity=0.008  Sum_probs=0.0  Template_Neff=13.000
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.+.|.++||..+.+.+.
T Consensus         7 ~~~~~~~~~~~~~~~~~~   24 (94)
T 2FB0_A            7 LNVFVRVNETNREKAIEA   24 (94)
T ss_dssp             EEEEEECCTTTHHHHHHH
T ss_pred             EEEEEEeCcccHHHHHHH
No 20
>3HX9_B Protein Rv3592; di-heme, beta barrel, dimer, OXIDOREDUCTASE; HET: HEM; 1.75A {Mycobacterium tuberculosis} SCOP: d.58.4.0
Probab=24.01  E-value=1.9e+02  Score=19.47  Aligned_cols=18  Identities=17%  Similarity=0.266  Sum_probs=0.0  Template_Neff=11.200
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      ++++|+++||..+.+.++
T Consensus         5 ~i~~~~~~~~~~~~~~~~   22 (124)
T 3HX9_B            5 KINAIEVPAGAGPELEKR   22 (124)
T ss_dssp             EEEEECCCTTCHHHHHHH
T ss_pred             EEEEEEECCCchHHHHHH
No 21
>PF11961.12 ; DUF3475 ; Domain of unknown function (DUF3475)
Probab=23.97  E-value=99  Score=20.88  Aligned_cols=32  Identities=16%  Similarity=0.300  Sum_probs=0.0  Template_Neff=5.800
Q ss_pred             EecCCHHHHHHHHHhCCCCCCCcceecCChHH
Q FD01848354_044    6 YRTMSEDNYATLQSTGRMPGTTETTISPTRVF   37 (126)
Q Consensus         6 YRtMS~~~~~~L~~tG~l~~t~ETfiSp~~~y   37 (126)
                      |++||+++...|++.---...-...||.+..|
T Consensus        17 ~~sLsd~~i~~lr~~~l~s~GV~~LVS~d~~~   48 (57)
T W1Q067_AMBTC/3   17 WRSLSDNQISRLKAETITLEGIRKIVSNDDSF   48 (57)
T ss_pred             HHhcCHHHHHHHHHHccCChhhhhccCCCHHH
No 22
>3BM7_A Protein of unknown function with ferredoxin-like fold; FERREDOXIN-LIKE FOLD, ANTIBIOTIC BIOSYNTHESIS MONOOXYGENASE, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE; HET: MSE; 1.35A {Caulobacter crescentus}
Probab=23.62  E-value=1.8e+02  Score=18.99  Aligned_cols=18  Identities=11%  Similarity=0.397  Sum_probs=0.0  Template_Neff=11.600
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      ++++|.++||..+.+.++
T Consensus        23 ~~~~~~~~~~~~~~~~~~   40 (115)
T 3BM7_A           23 VVATLKVQPAKAAEFEKV   40 (115)
T ss_dssp             EEEEEEECGGGHHHHHHH
T ss_pred             EEEEEEeChhhHHHHHHH
No 23
>6DS7_B Heme-degrading monooxygenase HmoB; Heme Oxygenase (decyclizing) Activity, Monooxygenase Activity, Oxidoreductase Activity, Heme Binding, Metal Ion Binding, Heme Catabolic Process; HET: HEM; 1.9A {Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)} SCOP: d.58.4.0
Probab=23.56  E-value=1.8e+02  Score=17.85  Aligned_cols=18  Identities=17%  Similarity=0.266  Sum_probs=0.0  Template_Neff=12.200
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +++++.++||..+.+.+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~   21 (99)
T 6DS7_B            4 KINAIEVPAGAGPELEKR   21 (99)
T ss_dssp             EEEEEECCTTCHHHHHHH
T ss_pred             EEEEEEeCCCCcHHHHHH
No 24
>4HL9_G Antibiotic biosynthesis monooxygenase; nysgrc, psi-biology, Structural Genomics, New York Structural Genomics Research Consortium, alpha-beta, OXIDOREDUCTASE; HET: MSE, CSO; 1.93A {Rhodospirillum rubrum}
Probab=22.81  E-value=1.7e+02  Score=19.06  Aligned_cols=18  Identities=11%  Similarity=0.073  Sum_probs=0.0  Template_Neff=11.800
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.+.|.++||..+.+.+.
T Consensus        26 ~~~~~~~~~~~~~~~~~~   43 (118)
T 4HL9_G           26 VIAQDFIKPEAIDIVLPL   43 (118)
T ss_dssp             EEEEEEECGGGHHHHHHH
T ss_pred             EEEEEEeCHHHHHHHHHH
No 25
>PF15636.10 ; Tox-GHH ; GHH signature containing HNH/Endo VII superfamily nuclease toxin
Probab=22.69  E-value=3e+02  Score=18.01  Aligned_cols=42  Identities=26%  Similarity=0.206  Sum_probs=0.0  Template_Neff=9.300
Q ss_pred             ecCCHHHHHHHHHhCCCCCCCcceecCChHHHh-hCCeEEEEE
Q FD01848354_044    7 RTMSEDNYATLQSTGRMPGTTETTISPTRVFSE-AYDGVLVKF   48 (126)
Q Consensus         7 RtMS~~~~~~L~~tG~l~~t~ETfiSp~~~ys~-~Y~GvlV~f   48 (126)
                      +..++++.+.|+.+|+++.-.-.++-+...|.+ ..++-.|.|
T Consensus        34 ~~Wt~~e~~~ll~~g~~~~y~~~~~~~~~~~p~la~d~~ni~~   76 (78)
T I3KLV5_ORENI/2   34 RAWSEVEKQQLLSGGRVQGYDGYYSLPIEQQPELSDCPSNIHF   76 (78)
T ss_pred             CCCCHHHHHHHHhCCCCCCCcceecCCHHHCHhhCCCccceee
No 26
>1SQE_B hypothetical protein PG130; Structural genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION; 1.5A {Staphylococcus aureus} SCOP: d.58.4.5, l.1.1.1
Probab=22.50  E-value=2.2e+02  Score=18.45  Aligned_cols=18  Identities=6%  Similarity=0.163  Sum_probs=0.0  Template_Neff=11.500
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.+.|.++||..+.+.+.
T Consensus         5 ~~~~~~~~~~~~~~~~~~   22 (109)
T 1SQE_B            5 AENRLQLQKGSAEETIER   22 (109)
T ss_dssp             EEEEEEEETTCHHHHHHT
T ss_pred             EEEEEEeCCCCHHHHHHH
No 27
>PF10126.13 ; Nit_Regul_Hom ; Uncharacterized protein, homolog of nitrogen regulatory protein PII
Probab=21.03  E-value=65  Score=25.14  Aligned_cols=13  Identities=31%  Similarity=0.590  Sum_probs=0.0  Template_Neff=3.100
Q ss_pred             EecCCHHHHHHHH
Q FD01848354_044    6 YRTMSEDNYATLQ   18 (126)
Q Consensus         6 YRtMS~~~~~~L~   18 (126)
                      ||.||+++++-|.
T Consensus        34 YkGmSP~~WkgF~   46 (107)
T A6UTQ3_META3/1   34 YKGMSPQEWAGFL   46 (107)
T ss_pred             ccCCCHHHhcccc
No 28
>8AVH_A Heme-degrading monooxygenase; HEME DEGRADATION, MONOOXYGENASE, OXIDOREDUCTASE; 1.9A {Bacillus cereus ATCC 14579}
Probab=20.90  E-value=2.4e+02  Score=17.76  Aligned_cols=18  Identities=17%  Similarity=0.146  Sum_probs=0.0  Template_Neff=12.000
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      +.++|.++||..+.+.++
T Consensus         4 ~~~~~~v~~~~~~~~~~~   21 (107)
T 8AVH_A            4 VTNTAKITKGNGHKLIER   21 (107)
T ss_dssp             EEEEEEEETTCHHHHHHH
T ss_pred             EEEEEEeCCccHHHHHHH
No 29
>2OB9_B Tail assembly chaperone; Bacteriophage HK97, morphogenesis, tail assembly chaperone, CHAPERONE; HET: MSE; 2.3A {Enterobacteria phage HK97}
Probab=20.78  E-value=2.3e+02  Score=20.74  Aligned_cols=19  Identities=16%  Similarity=0.258  Sum_probs=0.0  Template_Neff=9.000
Q ss_pred             CCeeEEecCCHHHHHHHHH
Q FD01848354_044    1 EAEIFYRTMSEDNYATLQS   19 (126)
Q Consensus         1 ~~EifYRtMS~~~~~~L~~   19 (126)
                      |.++|+|.||..++..+.+
T Consensus        30 g~~v~vr~ls~~e~~~~~~   48 (130)
T 2OB9_B           30 GVKVVLREPSGEAWLRWQE   48 (130)
T ss_dssp             TEEEEEECCCHHHHHHHHH
T ss_pred             CcEEEEECCCHHHHHHHHH
No 30
>1LQ9_B ACTVA-ORF6 MONOOXYGENASE; MONOOXYGENASE, AROMATIC POLYKETIDES, ACTINORHODIN, DIHYDROKALAFUNGIN, STREPTOMYCES COELICOLOR, OXIDOREDUCTASE; HET: PG4; 1.3A {Streptomyces coelicolor} SCOP: d.58.4.3
Probab=20.16  E-value=2.2e+02  Score=18.21  Aligned_cols=18  Identities=28%  Similarity=0.486  Sum_probs=0.0  Template_Neff=11.900
Q ss_pred             EEEEEEec-CChHHHHHHh
Q FD01848354_044   44 VLVKFNMK-SGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~k-pGT~~~L~~i   61 (126)
                      ++++|.++ ||..+.+.+.
T Consensus        12 ~~~~~~v~~~~~~~~~~~~   30 (112)
T 1LQ9_B           12 AVVTFPVDGPATQHKLVEL   30 (112)
T ss_dssp             EEEEEEBSSHHHHHHHHHH
T ss_pred             EEEEEEeCChHHHHHHHHH
No 31
>4DN9_B Antibiotic biosynthesis monooxygenase; STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NEW YORK STRUCTURAL GENOMIX RESEARCH CONSORTIUM, NYSGRC, PSI-Biology, New York Structural; HET: SO4, DIO, MSE; 2.05A {Chloroflexus aurantiacus}
Probab=20.14  E-value=2.3e+02  Score=18.80  Aligned_cols=18  Identities=22%  Similarity=0.388  Sum_probs=0.0  Template_Neff=11.400
Q ss_pred             EEEEEEecCChHHHHHHh
Q FD01848354_044   44 VLVKFNMKSGTQKSLENI   61 (126)
Q Consensus        44 vlV~f~~kpGT~~~L~~i   61 (126)
                      ++++|.++||..+.+.+.
T Consensus        26 ~~~~~~v~~~~~~~~~~~   43 (122)
T 4DN9_B           26 LIGKMRATPGQRDALIAI   43 (122)
T ss_dssp             EEEEEEESTTCHHHHHHH
T ss_pred             EEEEEEcCCccHHHHHHH