Query FD01543557_01792 putative RHS-like protein
Match_columns 110
No_of_seqs 46 out of 49
Neff 4.97126
Searched_HMMs 86581
Date Tue Feb 27 19:27:03 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/2683590.hhr -oa3m ../results/2683590.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF14407.10 ; Frankia_peptide ; 87.3 6.6 7.6E-05 24.9 5.9 59 49-110 1-59 (62)
2 PF11944.12 ; DUF3461 ; Protein 84.2 25 0.00029 26.8 8.9 83 4-107 39-127 (127)
3 PF17898.5 ; GerD ; Spore germi 73.2 19 0.00022 26.4 4.9 33 42-74 81-113 (114)
4 PF03923.17 ; Lipoprotein_16 ; 69.2 29 0.00033 24.9 5.0 47 19-67 101-160 (161)
5 4O8W_E Spore germination prote 65.1 42 0.00049 25.5 5.3 34 43-76 89-122 (125)
6 7CYW_A UDP-glycosyltransferase 61.9 81 0.00094 24.0 6.4 51 47-109 393-443 (443)
7 6LK7_D Nitrile hydratase, alph 58.0 90 0.001 21.3 6.3 60 47-108 7-66 (85)
8 6L7H_A GgCGT1; di-C-glycosyltr 57.9 84 0.00097 24.0 5.9 52 47-107 422-473 (474)
9 PF20304.2 ; Sp-CxC ; Small pro 56.2 87 0.001 20.6 6.4 51 43-108 1-51 (60)
10 8HZZ_B apiosyltransferase; gly 53.2 1.5E+02 0.0017 22.6 6.5 52 47-107 401-453 (454)
11 6LFN_B LpCGTb; LpCGTb protein, 52.1 92 0.0011 24.3 5.4 52 47-107 418-469 (469)
12 1K3S_B SigE; Type III, secreti 48.6 1.3E+02 0.0015 20.4 5.3 43 10-57 20-62 (113)
13 PF19064.4 ; DUF5760 ; Family o 46.8 1.1E+02 0.0012 21.0 4.5 44 27-81 27-70 (84)
14 PF07862.15 ; Nif11 ; Nif11 dom 46.2 71 0.00081 18.4 3.2 23 47-69 3-25 (51)
15 7UPO_C DHT03 protein C; de nov 45.2 1.6E+02 0.0019 20.6 6.6 62 44-109 2-63 (77)
16 3PLW_A Recombination enhanceme 43.2 1E+02 0.0012 24.7 4.6 29 47-76 20-48 (186)
17 PF21614.1 ; DUF6854 ; Domain o 42.7 1.2E+02 0.0014 20.2 4.2 35 26-67 47-81 (96)
18 6NKL_D Antitoxin VapB1; Toxin, 41.3 80 0.00092 21.1 3.3 40 18-60 42-81 (96)
19 PF02684.19 ; LpxB ; Lipid-A-di 41.1 1.2E+02 0.0014 23.6 4.6 43 47-100 310-352 (353)
20 2W1T_A STAGE V SPORULATION PRO 40.8 1.2E+02 0.0013 22.6 4.3 49 12-61 25-73 (178)
21 8T1T_D RiPP precursor (SonA); 40.7 1E+02 0.0012 20.7 3.7 28 49-76 10-37 (75)
22 3QYH_A Co-type Nitrile Hydrata 40.6 66 0.00077 26.6 3.3 28 51-78 75-102 (226)
23 3BBZ_B P protein; molten globu 40.0 89 0.001 20.5 3.1 25 50-74 7-31 (49)
24 3A8G_A Nitrile hydratase subun 38.6 66 0.00076 26.1 2.9 28 51-78 58-85 (207)
25 8HL3_AS8E 30S ribosomal protei 38.5 93 0.0011 22.9 3.5 31 6-36 94-125 (126)
26 1ZYM_B ENZYME I; PHOSPHOTRANSF 38.3 2.9E+02 0.0034 21.5 6.7 61 47-107 69-137 (258)
27 5VIT_K MdcC; acyl carrier prot 38.2 1.5E+02 0.0018 21.2 4.4 40 16-60 26-65 (99)
28 2M2K_A HasB protein; HasB CTD, 36.5 2.3E+02 0.0026 19.8 5.0 38 19-57 63-100 (131)
29 4OB0_A Cobalt-containing nitri 36.2 77 0.00089 25.8 3.0 28 51-78 56-83 (210)
30 3VYG_I Thiocyanate hydrolase s 36.1 1.1E+02 0.0013 25.6 4.0 28 51-78 65-92 (243)
31 1XL3_C protein type A; yopN, T 34.4 1.6E+02 0.0019 20.2 4.0 35 44-78 46-80 (92)
32 3HHT_A Nitrile hydratase alpha 34.0 1.1E+02 0.0013 25.0 3.5 28 51-78 64-91 (216)
33 PF06857.15 ; ACP ; Malonate de 33.6 1.9E+02 0.0021 20.0 4.1 40 16-57 12-52 (82)
34 PF13317.10 ; DUF4088 ; Protein 33.5 2.9E+02 0.0033 23.7 5.8 48 50-105 129-179 (227)
35 2KCY_A 30S ribosomal protein S 33.4 1.4E+02 0.0016 21.0 3.5 31 6-36 57-88 (98)
36 PF02979.20 ; NHase_alpha ; Nit 33.4 1.3E+02 0.0015 23.7 3.7 32 47-78 37-68 (182)
37 PF16753.9 ; Tipalpha ; TNF-alp 33.3 2.6E+02 0.003 20.1 5.1 49 26-78 101-149 (150)
38 PF13711.10 ; DUF4160 ; Domain 32.8 1.4E+02 0.0016 18.1 3.2 47 11-60 16-63 (65)
39 4JMF_B Probable chaperone; Typ 31.7 1.6E+02 0.0019 19.5 3.6 23 10-33 27-49 (116)
40 PF09059.14 ; TyeA ; TyeA 31.2 1.9E+02 0.0022 19.5 3.8 35 44-78 43-77 (83)
41 4ZGJ_M Nitrile hydratase alpha 30.4 1.5E+02 0.0017 24.0 3.7 32 47-78 41-72 (206)
42 7O39_B DivIVA; Cell division, 30.3 2.1E+02 0.0024 17.4 4.6 48 30-78 11-58 (59)
43 6J2U_A Tyrosinase co-factor pr 29.5 3.2E+02 0.0037 20.6 5.1 45 10-57 65-109 (118)
44 7X15_A Mitoguardin 2; MIGA2, F 29.0 5.7E+02 0.0066 22.1 7.0 48 49-107 46-93 (262)
45 4UG1_B CELL CYCLE PROTEIN GPSB 28.6 1.2E+02 0.0014 19.7 2.4 70 10-81 1-70 (76)
46 PF15937.9 ; PrlF_antitoxin ; p 28.3 2.9E+02 0.0033 18.3 5.7 67 13-80 20-86 (99)
47 1LR0_A TolA protein; Domain-Sw 28.1 3.1E+02 0.0036 18.7 4.9 38 19-57 54-91 (129)
48 6M3G_A Histone PARylation fact 27.8 3.4E+02 0.004 23.7 5.6 66 23-100 228-293 (346)
49 4DAM_B Single-stranded DNA-bin 27.3 1.2E+02 0.0014 21.0 2.5 32 5-37 79-110 (128)
50 2KCO_A 30S ribosomal protein S 27.1 1.8E+02 0.002 21.7 3.4 32 5-36 94-126 (133)
51 4N9W_A GDP-mannose-dependent a 27.0 4.5E+02 0.0052 20.2 6.1 48 47-107 320-367 (390)
52 6GDT_A Endoglucanase-related p 26.7 1.7E+02 0.002 25.7 3.7 54 25-81 235-289 (582)
53 PF09104.14 ; BRCA-2_OB3 ; BRCA 26.6 4.2E+02 0.0049 19.8 6.7 70 4-76 60-134 (135)
54 5WOY_A Phosphoenolpyruvate-pro 26.6 4.8E+02 0.0055 20.3 7.0 58 47-107 69-137 (248)
55 PF07166.15 ; DUF1398 ; Protein 26.2 3E+02 0.0034 19.8 4.3 60 5-69 31-90 (119)
56 4UG3_B CELL CYCLE PROTEIN GPSB 25.9 2.3E+02 0.0026 18.0 3.3 58 23-81 11-68 (71)
57 6CQO_D Single-stranded DNA-bin 25.6 1.3E+02 0.0016 19.8 2.3 33 5-37 60-92 (119)
58 PF20555.2 ; DUF6767 ; Domain o 25.3 1.9E+02 0.0022 19.7 2.9 20 57-76 35-54 (57)
59 6TH6_Ak 30S ribosomal protein 24.8 1.9E+02 0.0022 21.8 3.2 32 5-36 93-125 (130)
60 PF13590.10 ; DUF4136 ; Domain 24.8 3.6E+02 0.0042 18.8 4.4 42 19-60 112-158 (161)
61 7ES0_A Glycosyltransferase; st 24.7 5.1E+02 0.0059 20.0 5.8 51 47-109 409-459 (470)
62 4ZGJ_M Nitrile hydratase alpha 24.4 4.3E+02 0.005 21.5 5.3 60 15-78 77-136 (206)
63 4AKX_A SPCU; TRANSPORT PROTEIN 23.5 3.6E+02 0.0042 18.3 4.2 45 10-57 20-64 (127)
64 3HBF_A Flavonoid 3-O-glucosylt 23.4 5.3E+02 0.0061 19.8 5.5 51 47-109 401-454 (454)
65 PF12687.11 ; DUF3801 ; Protein 23.3 5E+02 0.0057 19.4 5.2 58 18-76 65-126 (136)
66 3VDY_A Single-stranded DNA-bin 22.9 1.7E+02 0.002 19.0 2.5 33 5-37 66-98 (116)
67 PF14395.10 ; COOH-NH2_lig ; Ph 22.8 68 0.00078 26.7 0.6 11 10-21 94-104 (253)
68 6TX2_A Histone PARylation fact 22.8 4.9E+02 0.0056 22.5 5.6 66 23-100 200-265 (318)
69 4NG2_H Uncharacterized protein 22.6 2.4E+02 0.0027 21.4 3.3 72 20-105 30-101 (113)
70 PF14035.10 ; YlzJ ; YlzJ-like 22.5 2.5E+02 0.0029 18.4 3.1 30 13-44 24-53 (65)
71 PF12021.12 ; DUF3509 ; Protein 22.4 2E+02 0.0023 20.4 2.8 56 15-76 10-66 (88)
72 4OB1_A Cobalt-containing nitri 22.2 2.3E+02 0.0027 23.9 3.6 62 13-78 165-227 (290)
73 3RSC_A CalG2; TDP, enediyne, S 22.2 4.4E+02 0.0051 20.2 4.8 30 47-76 368-397 (415)
74 8IYJ_b1 Coiled-coil domain-con 22.1 9.1E+02 0.011 22.0 7.4 62 43-108 290-351 (499)
75 5DGR_A Putative endoglucanase- 22.0 2.4E+02 0.0027 25.0 3.7 54 25-81 234-297 (586)
76 PF07386.15 ; DUF1499 ; Protein 22.0 1.7E+02 0.002 20.6 2.4 30 6-35 61-92 (115)
77 PF11416.12 ; Syntaxin-5_N ; Sy 21.9 1.9E+02 0.0022 14.1 2.1 17 94-110 7-23 (23)
78 PF00333.24 ; Ribosomal_S5 ; Ri 21.9 3.2E+02 0.0037 16.7 3.6 33 21-54 26-58 (65)
79 6HLN_B Genome polyprotein; com 21.8 1.7E+02 0.0019 20.1 2.2 44 26-70 1-44 (63)
80 PF06236.15 ; MelC1 ; Tyrosinas 21.3 4.1E+02 0.0047 20.0 4.3 50 10-63 57-106 (109)
81 5W8X_A Lipid-A-disaccharide sy 21.2 5E+02 0.0057 19.8 4.8 43 47-100 334-376 (382)
82 1ZRU_A lactophage p2 receptor 21.1 3E+02 0.0035 22.4 3.9 32 2-34 56-87 (264)
83 6EZ3_D Cyclo(L-leucyl-L-leucyl 21.0 6E+02 0.0069 20.3 5.5 35 42-76 114-148 (234)
84 2IYA_B OLEANDOMYCIN GLYCOSYLTR 21.0 4.8E+02 0.0056 19.8 4.7 30 47-76 376-405 (424)
85 7Q3S_A Glycosyltransferase; UG 20.9 6.1E+02 0.007 19.5 5.9 55 47-110 425-482 (488)
86 7C2X_A Glycosyltransferase; UD 20.9 6.5E+02 0.0075 19.9 6.5 53 47-110 437-492 (514)
87 4OLP_C GrpU microcompartment s 20.9 2.1E+02 0.0025 20.9 2.7 45 5-57 52-96 (107)
88 PF16715.9 ; CDPS ; Cyclodipept 20.5 6.5E+02 0.0075 19.9 5.5 35 42-76 112-146 (219)
89 1Z0J_B FYVE-finger-containing 20.5 4.3E+02 0.005 17.7 3.9 33 67-109 14-46 (59)
90 1JG7_A DNA BETA-GLUCOSYLTRANSF 20.4 4.9E+02 0.0057 20.0 4.7 30 47-76 303-332 (351)
91 4O8W_E Spore germination prote 20.3 1.8E+02 0.002 22.2 2.3 32 37-69 41-72 (125)
92 5T12_A Phosphoenolpyruvate--pr 20.1 6.8E+02 0.0078 19.7 7.4 54 47-107 69-136 (255)
93 1Z0K_D FYVE-finger-containing 20.1 4.2E+02 0.0049 18.2 3.9 33 67-109 25-57 (69)
No 1
>PF14407.10 ; Frankia_peptide ; Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
Probab=87.28 E-value=6.6 Score=24.89 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHhcC
Q FD01543557_017 49 AIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVERH 110 (110)
Q Consensus 49 Ai~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLek~ 110 (110)
+|.+....+..||+||+.|+.....+++ +...+-.. +.....-=++..+..|...|.++
T Consensus 1 ~~~~ll~~~~~d~~fr~~l~~dP~~~l~-~~~~g~~L--~~~e~~~l~~~d~~~l~~~l~~~ 59 (62)
T A9AXK5_HERA2/8 1 EFQRLIDQATSDEAFRQELLDSSNIAET-LKNHGFNL--TDDELQQVEASASNFQGLGISAR 59 (62)
T ss_pred CHHHHHHHHHcCHHHHHHHHhCHHHHHH-HHHcCCCC--CHHHHHHHHhhhHHHHHHhHHhh
No 2
>PF11944.12 ; DUF3461 ; Protein of unknown function (DUF3461)
Probab=84.18 E-value=25 Score=26.82 Aligned_cols=83 Identities=13% Similarity=0.230 Sum_probs=0.0 Template_Neff=5.100
Q ss_pred ccceeceEEEEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhh------CHHHHHHHHHHHHHHHHH
Q FD01543557_017 4 GDVVQKGLHFYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEK------DVRFRNDILNKANEAVQS 77 (110)
Q Consensus 4 ~Dw~tKG~H~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~------~~~~R~~li~~a~~a~~~ 77 (110)
|+|+.+=.-|+++. .--.|..| .|+-.++.+.-. ++.+.+||.+.. ++.. ..+.++.|++.++.--..
T Consensus 39 Gs~lp~S~KfkF~R-~~k~v~~d-~g~~~~~~~~ei---sP~L~~ai~ELd-~L~~~~~~~~~~d~K~~il~eL~hLE~v 112 (127)
T Y1169_AERHH/1- 39 GEFFAKSVKFKYPR-QRKTMLVD-SGTHEYKDVTEI---NANLKYVVDELD-NLTQGVHVQADPDIKQKILRDLRHLEKV 112 (127)
T ss_pred CceeceEEEEEeec-cCceeEec-CCCcceeechhc---CHHHHHHHHHHH-HhhccCccCCCHhHHHHHHHHHHHHHHH
Q ss_pred HHHhccccccchhhHhcchHHHHHHHHHHH
Q FD01543557_017 78 VLDHAKRETGSLRDLANGRSREFRDIARNV 107 (110)
Q Consensus 78 ~~~~~~~~~~~~~~la~~Ra~E~~~L~kaL 107 (110)
|. .|-.|++..+..|
T Consensus 113 v~---------------~Ki~eir~~le~L 127 (127)
T Y1169_AERHH/1- 113 VQ---------------NKISEIERDLEKL 127 (127)
T ss_pred HH---------------HHHHHHHHHHHhC
No 3
>PF17898.5 ; GerD ; Spore germination GerD central core domain
Probab=73.24 E-value=19 Score=26.41 Aligned_cols=33 Identities=18% Similarity=0.080 Sum_probs=0.0 Template_Neff=6.500
Q ss_pred CCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q FD01543557_017 42 GSPKVTKAIALAKEHFEKDVRFRNDILNKANEA 74 (110)
Q Consensus 42 ~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a 74 (110)
.++.++.++..+..+.++||.||..+.+....|
T Consensus 81 k~pe~r~~~~~~m~e~m~~P~~~~~~~~~~~ka 113 (114)
T F9DU05_9BACL/6 81 NSSKMKKEMEKAVEDTINSPLMQAKWQQLIMKA 113 (114)
T ss_pred cCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHh
No 4
>PF03923.17 ; Lipoprotein_16 ; Uncharacterized lipoprotein
Probab=69.21 E-value=29 Score=24.91 Aligned_cols=47 Identities=11% Similarity=0.243 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred eEEEEccCCCCcEEEEeCcccCCCC-------------HHHHHHHHHHHHHHhhCHHHHHHH
Q FD01543557_017 19 VELSVRPDNKGGITFTNAIPNEAGS-------------PKVTKAIALAKEHFEKDVRFRNDI 67 (110)
Q Consensus 19 vEL~v~Pd~~GgI~fk~Vfs~~~~~-------------~~~~kAi~~a~~~~l~~~~~R~~l 67 (110)
+.+.+.--..|+. |...+.. ... ..+.+++.++.+++++||+|++.|
T Consensus 101 v~i~v~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~l~~l~~D~~l~~~l 160 (161)
T A1STV5_PSYIN/3 101 VVIKIQLKSNNKT-FSKTFNS-HTVSEAPLNADGVKISAQLNKQLSLLLTEIVIDPELNTKL 160 (161)
T ss_pred EEEEEEEEcCCEE-EEEEEEe-eeeEEeccCCCHHHHHHHHHHHHHHHHHHHHhCHHHHHHh
No 5
>4O8W_E Spore germination protein; superhelical rope fold, scaffold, spore inner membrane, structural protein, signaling protein; 2.293A {Geobacillus kaustophilus}
Probab=65.05 E-value=42 Score=25.48 Aligned_cols=34 Identities=9% Similarity=0.066 Sum_probs=0.0 Template_Neff=5.500
Q ss_pred CHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 43 SPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 43 ~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~ 76 (110)
++..++.+..+..+.+.+|.|+..|.+-...|.+
T Consensus 89 s~e~R~~~~~~m~E~m~sP~fk~~l~~~~~~a~~ 122 (125)
T 4O8W_E 89 SKEFRQHLQKVITETLNSPLYQAKIQDMLMKAAE 122 (125)
T ss_dssp SHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
No 6
>7CYW_A UDP-glycosyltransferase 708C1; flavonoid C-glucosyltransferase, glycosyltransferase, C-glycosylation, TRANSFERASE; HET: BUP; 1.8A {Fagopyrum esculentum} SCOP: c.87.1.0
Probab=61.87 E-value=81 Score=23.99 Aligned_cols=51 Identities=14% Similarity=0.148 Sum_probs=0.0 Template_Neff=13.400
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHhc
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVER 109 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLek 109 (110)
..++..+...+++|+++|+.+.+.++++.++....+. ...-+..+.+.+++
T Consensus 393 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~ 443 (443)
T 7CYW_A 393 QAAIVEKVKMIMGNNDLRKSAMKVGEEAKRACDVGGS------------SATALMNIIGSLKR 443 (443)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHSTTSH------------HHHHHHHHHHHCC-
T ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhcCCCc------------hHHHHHHHHHHhcC
No 7
>6LK7_D Nitrile hydratase, alpha chain; antibiotic-related protein, UNKNOWN FUNCTION; 1.903A {Pseudomonas sp. Os17}
Probab=57.99 E-value=90 Score=21.31 Aligned_cols=60 Identities=7% Similarity=0.098 Sum_probs=0.0 Template_Neff=7.500
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHh
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVE 108 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLe 108 (110)
...+......+..||+||..|+..-++++..+ ....+.....-+......++..+...|.
T Consensus 7 ~~~l~~li~~l~~D~~fr~~l~~dP~~~l~~~--g~~Ls~~e~~~l~~~~~~~L~~~~~~l~ 66 (85)
T 6LK7_D 7 QERLASVVGRALLDKDFAAQLHQDPEAAAKGI--GVHLSATEVGAVKSIDTAKLTSAGSAIR 66 (85)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHCHHHHHHTT--TBCCCHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHc--CCCCCHHHHHHHHcCCHHHHHHHHHHHH
No 8
>6L7H_A GgCGT1; di-C-glycosyltransferase, TRANSFERASE; HET: E7F, UDP; 1.8A {Glycyrrhiza glabra} SCOP: c.87.1.0
Probab=57.94 E-value=84 Score=24.02 Aligned_cols=52 Identities=10% Similarity=0.026 Sum_probs=0.0 Template_Neff=13.600
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNV 107 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaL 107 (110)
..++..+...+++|+++|+.+.+.++.+.+...+.+... .-+.++..+...+
T Consensus 422 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 473 (474)
T 6L7H_A 422 GEEIGEAIREVMNDESLVMKATQVKKDARKAISVGGGCE---------VALQKLMEVWKKN 473 (474)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSTTSHHH---------HHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCChHH---------HHHHHHHHHHhhc
No 9
>PF20304.2 ; Sp-CxC ; Small protein from certain CxC ATPase-based DNA modification systems
Probab=56.17 E-value=87 Score=20.60 Aligned_cols=51 Identities=8% Similarity=0.107 Sum_probs=0.0 Template_Neff=6.100
Q ss_pred CHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHh
Q FD01543557_017 43 SPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVE 108 (110)
Q Consensus 43 ~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLe 108 (110)
.+.+++||++|.++.-+.+.+-.+|+ ++++-|..... +....-++|.+.++
T Consensus 1 d~~i~~ai~eav~e~~Qp~~~a~Rl~----awle~~~~g~~-----------~~~~~~~~l~~i~e 51 (60)
T A0A261KMA5_9CY 1 DKEIEKAIRESVSEASQAEAVANRLI----KWLEEMSKQNL-----------NETDKSERLELVYD 51 (60)
T ss_pred CHHHHHHHHHHHHHccCCHHHHHHHH----HHHHHHHcCCC-----------CchhHhHHHHHHHH
No 10
>8HZZ_B apiosyltransferase; glycosyltransferase, PLANT PROTEIN; HET: SO4; 2.2A {Glycyrrhiza uralensis}
Probab=53.23 E-value=1.5e+02 Score=22.56 Aligned_cols=52 Identities=10% Similarity=0.135 Sum_probs=0.0 Template_Neff=13.600
Q ss_pred HHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDV-RFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNV 107 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~-~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaL 107 (110)
.+.+..+...+++|| +.|+.+.+++.+..+.+....... .-+..+..++..+
T Consensus 401 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 453 (454)
T 8HZZ_B 401 KESVCKAVKIVMDEENEIGREVRANHTKVRNLLLSNNLES---------SCVDTFCDRLRGL 453 (454)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHSTTHHH---------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHCCCCc---------HHHHHHHHHHHhh
No 11
>6LFN_B LpCGTb; LpCGTb protein, TRANSFERASE; HET: PO4; 2.395A {Landoltia punctata} SCOP: c.87.1.0
Probab=52.06 E-value=92 Score=24.29 Aligned_cols=52 Identities=15% Similarity=0.145 Sum_probs=0.0 Template_Neff=13.000
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNV 107 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaL 107 (110)
.+++.++..++++|+.+|+...+-.+.+++.....+... ....++..+...+
T Consensus 418 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 469 (469)
T 6LFN_B 418 GEEIARRIKDFMGDNALRAVAAKMKKETASAMAPGGSKD---------QWFDDFIARINRV 469 (469)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSTTSHHH---------HHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHccCCcchh---------HHHHHHHHHHhcC
No 12
>1K3S_B SigE; Type III, secretion, chaperone, SigE; HET: MSE; 1.9A {Salmonella enterica} SCOP: d.198.1.1
Probab=48.59 E-value=1.3e+02 Score=20.38 Aligned_cols=43 Identities=2% Similarity=-0.021 Sum_probs=0.0 Template_Neff=9.700
Q ss_pred eEEEEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHH
Q FD01543557_017 10 GLHFYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHF 57 (110)
Q Consensus 10 G~H~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~ 57 (110)
++++.++++++|.+.++ .+.|.+...... -+... ...+... ++
T Consensus 20 ~~~l~~d~~~~v~~~~~-~~~l~l~~~lg~-~~~~~--~~~~~lL-~~ 62 (113)
T 1K3S_B 20 EPLLIIDDGIQVYFNES-DHTLEMCCPFMP-LPDDI--LTLQHFL-RL 62 (113)
T ss_dssp --CEEETTTEEEEEECC-TTEEEEEEEEEE-CCCCH--HHHHHHH-HH
T ss_pred CCEEEECCceEEEEEcC-CCEEEEEEEeec-CCchH--HHHHHHH-Hh
No 13
>PF19064.4 ; DUF5760 ; Family of unknown function (DUF5760)
Probab=46.81 E-value=1.1e+02 Score=21.03 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred CCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHh
Q FD01543557_017 27 NKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDH 81 (110)
Q Consensus 27 ~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~ 81 (110)
++|.|.|..--.. .+-..+-|.+...++++|+ +|...++|+.++
T Consensus 27 ~~gkl~~~~~k~k---~~Ls~k~i~~~L~~~f~~~--------~a~~i~~~I~~~ 70 (84)
T D8LP92_ECTSI/3 27 PSGTIKIYSTKSS---APMNKTLIEESATELFGAD--------QAARFMKHVEDK 70 (84)
T ss_pred CCCeEEEEEeEEc---CCCCHHHHHHHHHHHhChH--------HHHHHHHHHHhh
No 14
>PF07862.15 ; Nif11 ; Nif11 domain
Probab=46.16 E-value=71 Score=18.44 Aligned_cols=23 Identities=0% Similarity=-0.068 Sum_probs=0.0 Template_Neff=9.500
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILN 69 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~ 69 (110)
...++...+.+.+||++|..|..
T Consensus 3 ~~~~~~f~~~~~~d~~l~~~l~~ 25 (51)
T B2JAK5_NOSP7/1 3 QENLEQFYVLVQNSEQLQELLGA 25 (51)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHc
No 15
>7UPO_C DHT03 protein C; de novo designed protein, DE NOVO PROTEIN; 2.1A {synthetic construct}
Probab=45.20 E-value=1.6e+02 Score=20.58 Aligned_cols=62 Identities=21% Similarity=0.295 Sum_probs=0.0 Template_Neff=1.000
Q ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHhc
Q FD01543557_017 44 PKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVER 109 (110)
Q Consensus 44 ~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLek 109 (110)
+.-+.||+.-.+-+--....-.-|+++..-.++.+..-.. .+++--+.-+.|++.+++-.++
T Consensus 2 skqkeaikvylellevhsrvlkalieqiklfielikrpde----dladkvrksseelkkiikevek 63 (77)
T 7UPO_C 2 SKQKEAIKVYLELLEVHSRVLKALIEQIKLFIELIKRPDE----DLADKVRKSSEELKKIIKEVEK 63 (77)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCch----HHHHHHHHCHHHHHHHHHHHHH
No 16
>3PLW_A Recombination enhancement function protein; HNH nuclease, DNase, HYDROLASE; 1.4A {Enterobacteria phage P1}
Probab=43.23 E-value=1e+02 Score=24.67 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=0.0 Template_Neff=6.400
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~ 76 (110)
++|+..-. +=++||++|++-+++...+.+
T Consensus 20 ~r~~~~~~-~k~~~p~~~~~~~~k~~~~~~ 48 (186)
T 3PLW_A 20 ERAIARQR-EKLADPVWRESQYQKMRDTLD 48 (186)
T ss_dssp ------------------------------
T ss_pred HHHHHHHH-HHHhCHHHHHHHHHHHHHHHH
No 17
>PF21614.1 ; DUF6854 ; Domain of unknown function (DUF6854)
Probab=42.68 E-value=1.2e+02 Score=20.19 Aligned_cols=35 Identities=6% Similarity=0.125 Sum_probs=0.0 Template_Neff=9.300
Q ss_pred CCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHH
Q FD01543557_017 26 DNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDI 67 (110)
Q Consensus 26 d~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~l 67 (110)
++.|.+.+.-.|.+ -.+...+.+.+.+||+|.+-+
T Consensus 47 ~~~g~~~~~~~~~s-------~~~~~~~~~~~~~d~~~~~~~ 81 (96)
T A0A177HDY4_9RH 47 KHPNALIFIQFFES-------LAGFENVMKAIPNSKPYESMI 81 (96)
T ss_pred CCCCeEEEEEEeCC-------hHHHHHHHHHcccCHHHHHHH
No 18
>6NKL_D Antitoxin VapB1; Toxin, antitoxin, H. influenzae, protein-protein complex; 2.2A {Haemophilus influenzae}
Probab=41.33 E-value=80 Score=21.13 Aligned_cols=40 Identities=8% Similarity=0.071 Sum_probs=0.0 Template_Neff=9.100
Q ss_pred eeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhC
Q FD01543557_017 18 GVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKD 60 (110)
Q Consensus 18 gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~ 60 (110)
|.||.|...++|+|+++|+-.. ...+.+.+....++++.+
T Consensus 42 gd~v~v~~~~~g~i~i~p~~~~---~~~~~~~~~~~~~~~~~~ 81 (96)
T 6NKL_D 42 VDTVEIFRKENGDVVLRPVSKK---TDDFLALFEGFDETFIQA 81 (96)
T ss_dssp SSEEEEEECTTSCEEEEECCHH---HHHHHHTTTTCCHHHHHH
T ss_pred CCEEEEEEcCCCeEEEEECCCC---hHHHHHHHhccCHHHHHH
No 19
>PF02684.19 ; LpxB ; Lipid-A-disaccharide synthetase
Probab=41.06 E-value=1.2e+02 Score=23.63 Aligned_cols=43 Identities=9% Similarity=-0.186 Sum_probs=0.0 Template_Neff=11.600
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREF 100 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~ 100 (110)
...+.++...+++|++.|+++.+.+.+....+..... +|+++.
T Consensus 310 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~a~~ 352 (353)
T LPXB_AQUAE/4-3 310 EILKGFEKVYKNEEEIKEKLGTLKFILGERFVIRKLR-----------ELFLEI 352 (353)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhcchHH-----------HHHHhh
No 20
>2W1T_A STAGE V SPORULATION PROTEIN T; TRANSCRIPTION, TRANSCRIPTION REGULATION, REPRESSOR, ACTIVATOR, SPORULATION, DNA-BINDING, GAF DOMAIN REGULATED TETRAMERIC SPOVT; 2.6A {BACILLUS SUBTILIS}
Probab=40.79 E-value=1.2e+02 Score=22.56 Aligned_cols=49 Identities=16% Similarity=0.075 Sum_probs=0.0 Template_Neff=9.500
Q ss_pred EEEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCH
Q FD01543557_017 12 HFYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDV 61 (110)
Q Consensus 12 H~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~ 61 (110)
++++..|-+|.+..+++|+|.+++.-+. .........+..+.......+
T Consensus 25 ~l~i~~g~~l~i~~~~~~~i~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 73 (178)
T 2W1T_A 25 TLRIREGDPLEIFVDRDGDVILKKYSPI-SELGDFAKEYADALYDSLGHS 73 (178)
T ss_dssp HTTCCTTCEEEEEECTTSCEEEEECCHH-HHTTHHHHHHHHHHHHHHCSE
T ss_pred HcCCCCCCeEEEEEcCCCcEEEEEeCCc-cchhHHHHHHHHHHHHHcCCc
No 21
>8T1T_D RiPP precursor (SonA); alpha-N-methyltransferase, borosin, natural products, TRANSFERASE; HET: SAM; 1.55A {Shewanella oneidensis}
Probab=40.69 E-value=1e+02 Score=20.74 Aligned_cols=28 Identities=7% Similarity=0.167 Sum_probs=0.0 Template_Neff=7.100
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 49 AIALAKEHFEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 49 Ai~~a~~~~l~~~~~R~~li~~a~~a~~ 76 (110)
.|.+....+..||++|+.+.+.-+++++
T Consensus 10 ~v~k~L~~l~~d~~~r~~f~~dP~~~l~ 37 (75)
T 8T1T_D 10 GLSDFFTQLGQDAQLMEDYKQNPEAVMR 37 (75)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHhCHHHHHH
No 22
>3QYH_A Co-type Nitrile Hydratase alpha subunit; nitrile hydratase, CO, Cobalt, Cysteine Sulfinic Acid, LYASE; HET: CSD; 2.0A {Pseudomonas putida} SCOP: d.149.1.1
Probab=40.65 E-value=66 Score=26.65 Aligned_cols=28 Identities=11% Similarity=0.168 Sum_probs=0.0 Template_Neff=6.000
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 51 ALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 51 ~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
.++...+..||+||+.|++....++..+
T Consensus 75 a~iVarAW~D~~Fk~rLl~dp~~al~e~ 102 (226)
T 3QYH_A 75 AKVVAKAWVDPAYKARLLADGTAGIAEL 102 (226)
T ss_dssp HHHHHHHHHCHHHHHHHHHCHHHHHHTT
T ss_pred hHHhHHHhcCHHHHHHHHhChhHHHHHh
No 23
>3BBZ_B P protein; molten globule, VIRAL PROTEIN, REPLICATION; HET: FMT; 2.1A {Mumps virus}
Probab=40.00 E-value=89 Score=20.50 Aligned_cols=25 Identities=8% Similarity=0.072 Sum_probs=0.0 Template_Neff=3.700
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHH
Q FD01543557_017 50 IALAKEHFEKDVRFRNDILNKANEA 74 (110)
Q Consensus 50 i~~a~~~~l~~~~~R~~li~~a~~a 74 (110)
+.+-..+|.+||..|+++..++.++
T Consensus 7 l~~likdCi~n~~~~q~fe~ki~~a 31 (49)
T 3BBZ_B 7 ITKMITDSVANPQMKQAFEQRLAKA 31 (49)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhC
No 24
>3A8G_A Nitrile hydratase subunit alpha; nitrile hydratase, Fe, Iron, Lyase, Metal-binding, Oxidation; 1.11A {Rhodococcus erythropolis} SCOP: d.149.1.1
Probab=38.56 E-value=66 Score=26.13 Aligned_cols=28 Identities=25% Similarity=0.192 Sum_probs=0.0 Template_Neff=6.500
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 51 ALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 51 ~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
.++...+..||+||+.|+....+++..+
T Consensus 58 a~vVarAW~D~~fk~rLl~dp~~al~e~ 85 (207)
T 3A8G_A 58 AELVARAWTDPEFRQLLLTDGTAAVAQY 85 (207)
T ss_dssp HHHHHHHHHCHHHHHHHHHCHHHHHHHT
T ss_pred hHHhhhhccCHHHHHHHHhCHHHHHHHh
No 25
>8HL3_AS8E 30S ribosomal protein S8e; Sulfolobus acidocaldarius ribosome small subunit, RIBOSOME; HET: GNP, UNK;{Sulfolobus acidocaldarius DSM 639}
Probab=38.46 E-value=93 Score=22.85 Aligned_cols=31 Identities=23% Similarity=0.312 Sum_probs=0.0 Template_Neff=7.500
Q ss_pred ceeceEEEEeCCe-eEEEEccCCCCcEEEEeC
Q FD01543557_017 6 VVQKGLHFYAPGG-VELSVRPDNKGGITFTNA 36 (110)
Q Consensus 6 w~tKG~H~~v~~g-vEL~v~Pd~~GgI~fk~V 36 (110)
.++||+-+.++.| ..+.=+|+++|.|.-.-+
T Consensus 94 ~itKgaiI~~~~g~a~vtsrpgq~g~~~~~~~ 125 (126)
T 8HL3_AS8E 94 IIVKGTLIQTELGKAKVTSRPGQDGIINALLL 125 (126)
T ss_pred ceeCCeEEEEcCcEEEEcCCCccccEEEEEEe
No 26
>1ZYM_B ENZYME I; PHOSPHOTRANSFERASE; 2.5A {Escherichia coli} SCOP: a.60.10.1, c.8.1.2
Probab=38.28 E-value=2.9e+02 Score=21.51 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHH--------HHHHHHHHhccccccchhhHhcchHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKAN--------EAVQSVLDHAKRETGSLRDLANGRSREFRDIARNV 107 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~--------~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaL 107 (110)
.++|-.+...+|.||.|+..+.+... +....+...-..........-+.|+.++..|...|
T Consensus 69 ~~~i~~~~~~ll~D~~l~~~i~~~I~~~~~~a~~A~~~~~~~~~~~~~~~~~~~~~~r~~d~~d~~~~l 137 (258)
T 1ZYM_B 69 KEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQASALEELDDEYLKERAADVRDIGKRL 137 (258)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTCBCHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
No 27
>5VIT_K MdcC; acyl carrier protein, acetyl-CoA carboxylase, TRANSFERASE; HET: MLI; 2.203A {Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)}
Probab=38.17 E-value=1.5e+02 Score=21.25 Aligned_cols=40 Identities=10% Similarity=0.145 Sum_probs=0.0 Template_Neff=6.500
Q ss_pred CCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhC
Q FD01543557_017 16 PGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKD 60 (110)
Q Consensus 16 ~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~ 60 (110)
++ +++.+.|...++|. ..+-|+ ... ..+.|+...+.+++.
T Consensus 26 ~D-~~V~v~p~~~~~i~-i~I~S~-v~~--fg~~i~~~i~~~l~~ 65 (99)
T 5VIT_K 26 GD-LEVLLEPGQPGKLS-IQVQTS-VNG--SASRWQHLFERLFDG 65 (99)
T ss_dssp TC-EEEEEEECCTTEEE-EEEEES-STT--CHHHHHHHHHHHTTT
T ss_pred Ce-EEEEEEECCCCcEE-EEEEeC-CCC--cHHHHHHHHHHHHhh
No 28
>2M2K_A HasB protein; HasB CTD, tonb-like protein, hemophore, HEME acquisition system, transport protein; NMR {Serratia marcescens}
Probab=36.50 E-value=2.3e+02 Score=19.83 Aligned_cols=38 Identities=16% Similarity=0.272 Sum_probs=0.0 Template_Neff=9.600
Q ss_pred eEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHH
Q FD01543557_017 19 VELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHF 57 (110)
Q Consensus 19 vEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~ 57 (110)
+-|.+.-+.+|.|.-..+..+ ++...+.+++..+...+
T Consensus 63 v~v~~~v~~~G~v~~~~i~~~-sg~~~~~~~~~~av~~~ 100 (131)
T 2M2K_A 63 GQVRFTLDRQGHVLAVTLVSS-AGLPSLDREIQALVKRA 100 (131)
T ss_dssp EEEEEEECTTSCEEEEEEEEE-SCCSHHHHHHHHHHHHC
T ss_pred EEEEEEECCCCcEEEEEEEec-CCCHHHHHHHHHHHHHh
No 29
>4OB0_A Cobalt-containing nitrile hydratase subunit alpha; Nitrile Hydratase, nucleophile, Lyase; 1.2A {Pseudonocardia thermophila} SCOP: d.149.1.1
Probab=36.16 E-value=77 Score=25.85 Aligned_cols=28 Identities=21% Similarity=0.262 Sum_probs=0.0 Template_Neff=6.400
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 51 ALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 51 ~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
.+....+..||+||+.|+....+++..+
T Consensus 56 a~lVarAW~D~~Fk~rLl~dp~~al~e~ 83 (210)
T 4OB0_A 56 AKVVVKAWTDPEFKKRLLADGTEACKEL 83 (210)
T ss_dssp HHHHHHHHHCHHHHHHHHHCHHHHHHTT
T ss_pred hHHhhhhcCCHHHHHHHHhChHHHHHHh
No 30
>3VYG_I Thiocyanate hydrolase subunit gamma; Thiocyanate hydrolase, Cysteine-sulfenic acid, Cysteine-sulfic acid, metalloenzyme, hydrolase; HET: CSD, TLA, CSO; 1.72A {Thiobacillus thioparus}
Probab=36.13 E-value=1.1e+02 Score=25.60 Aligned_cols=28 Identities=18% Similarity=0.115 Sum_probs=0.0 Template_Neff=6.000
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 51 ALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 51 ~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
.+....+..||+||+.|+....+++..+
T Consensus 65 a~lVArAW~D~~Fk~rLl~dp~~al~e~ 92 (243)
T 3VYG_I 65 ARLVAKAWLDPEYKKLCIEDGVEASKAV 92 (243)
T ss_dssp HHHHHHHHHCHHHHHHHHHCHHHHHHTT
T ss_pred HHHHHHHhcCHHHHHHHHHcHHHHHHHh
No 31
>1XL3_C protein type A; yopN, TyeA, Yersinia pestis, type III secretion, CELL INVASION; HET: MLY; 2.2A {Yersinia pestis} SCOP: a.243.1.1
Probab=34.45 E-value=1.6e+02 Score=20.21 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=0.0 Template_Neff=7.800
Q ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 44 PKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 44 ~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
..+...++..=..|+.|++-|..+++-...+++.+
T Consensus 46 ~~l~~~~r~lP~~~F~d~e~R~~ll~aiq~~lD~~ 80 (92)
T 1XL3_C 46 QDLKRMFRLFPLGVFSDEEQRQNLLQMCQNAIDMA 80 (92)
T ss_dssp HHHHHHHHTSCGGGSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHhHCCCHHHHHHHHHHHHHHHHHH
No 32
>3HHT_A Nitrile hydratase alpha subunit; Alpha and beta proteins (a+b), LYASE; HET: CSD; 1.16A {Geobacillus pallidus} SCOP: d.149.1.1
Probab=34.02 E-value=1.1e+02 Score=25.02 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=0.0 Template_Neff=6.600
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 51 ALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 51 ~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
.+....+..||+||+.|+....+++..+
T Consensus 64 a~iVarAW~D~~Fr~~Ll~dP~~al~e~ 91 (216)
T 3HHT_A 64 AKVVAKAWTDPAFKQRLLEDSETVLREL 91 (216)
T ss_dssp HHHHHHHHHCHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHhCHHHHHHHh
No 33
>PF06857.15 ; ACP ; Malonate decarboxylase delta subunit (MdcD)
Probab=33.60 E-value=1.9e+02 Score=20.03 Aligned_cols=40 Identities=13% Similarity=0.335 Sum_probs=0.0 Template_Neff=6.700
Q ss_pred CCeeEEEEccCCCC-cEEEEeCcccCCCCHHHHHHHHHHHHHH
Q FD01543557_017 16 PGGVELSVRPDNKG-GITFTNAIPNEAGSPKVTKAIALAKEHF 57 (110)
Q Consensus 16 ~~gvEL~v~Pd~~G-gI~fk~Vfs~~~~~~~~~kAi~~a~~~~ 57 (110)
++ +++.+.|...| .|..+..... .-.+.+.+.+.+..+++
T Consensus 12 ~D-~~V~v~p~~~~~~i~i~S~v~~-~fg~~i~~~v~~~l~~~ 52 (82)
T CITD_LACLA/4-8 12 SD-VQIMIAPANNGISIDLISDVKK-QFGKQIEATVRQVLAAY 52 (82)
T ss_pred Cc-EEEEEEECCCcEEEEEEecchH-hcHHHHHHHHHHHHHHc
No 34
>PF13317.10 ; DUF4088 ; Protein of unknown function (DUF4088)
Probab=33.53 E-value=2.9e+02 Score=23.69 Aligned_cols=48 Identities=15% Similarity=0.255 Sum_probs=0.0 Template_Neff=2.800
Q ss_pred HHHHHHHHhhCHHHH--HHHHHHHHHHHHHHHHhccccccchhhHh-cchHHHHHHHHH
Q FD01543557_017 50 IALAKEHFEKDVRFR--NDILNKANEAVQSVLDHAKRETGSLRDLA-NGRSREFRDIAR 105 (110)
Q Consensus 50 i~~a~~~~l~~~~~R--~~li~~a~~a~~~~~~~~~~~~~~~~~la-~~Ra~E~~~L~k 105 (110)
|+..+ +-+..|+|| .-|..++-.++--+....+ ..| +.|-.|++-|.+
T Consensus 129 i~~lE-e~mqTPAWrla~sLrqr~ye~~~a~e~~~g-------~~A~ReklGeLR~LL~ 179 (227)
T Q0K4N9_CUPNH/1 129 VRVLE-ERMRTPAWRLAESLRQRAYELMYALQTEDS-------EAAGRARVGELRGMLG 179 (227)
T ss_pred HHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHcccc-------hhhHHHHHHHHHHHHH
No 35
>2KCY_A 30S ribosomal protein S8e; RIBOSOMAL PROTEIN S8E, rsp8e, RDC, NESG, BETA, Ribonucleoprotein, Ribosomal protein, Structural Genomics, PSI-2, Protein Structure Initiative; NMR {Methanothermobacter thermautotrophicus str. Delta H}
Probab=33.45 E-value=1.4e+02 Score=21.04 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=0.0 Template_Neff=7.400
Q ss_pred ceeceEEEEeCCe-eEEEEccCCCCcEEEEeC
Q FD01543557_017 6 VVQKGLHFYAPGG-VELSVRPDNKGGITFTNA 36 (110)
Q Consensus 6 w~tKG~H~~v~~g-vEL~v~Pd~~GgI~fk~V 36 (110)
.++||+-+-++.| ..+.=+|++.|.|...-+
T Consensus 57 iitKgaii~~~~g~a~vtsrpgq~g~~~~~~~ 88 (98)
T 2KCY_A 57 IITRGAVVETNLGNVRVTSRPGQDGVINGVLI 88 (98)
T ss_dssp CCCTTCEEEETTEEEEECSCTTSBSBEEEEEC
T ss_pred eecCCeEEEEcCceEEEecCCCCccEEEEEEE
No 36
>PF02979.20 ; NHase_alpha ; Nitrile hydratase, alpha chain
Probab=33.42 E-value=1.3e+02 Score=23.72 Aligned_cols=32 Identities=22% Similarity=0.195 Sum_probs=0.0 Template_Neff=7.200
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
..........+.+|++||+.|+..-..++..+
T Consensus 37 ~~~~~~lia~aW~D~~fr~~L~~dP~~~l~e~ 68 (182)
T A8LN78_DINSH/2 37 PANGAAVVARAWTDPAFRARLLADGAEACREM 68 (182)
T ss_pred cchHHHHHHHHhcCHHHHHHHHHCHHHHHHHh
No 37
>PF16753.9 ; Tipalpha ; TNF-alpha-Inducing protein of Helicobacter
Probab=33.27 E-value=2.6e+02 Score=20.14 Aligned_cols=49 Identities=8% Similarity=-0.024 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred CCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 26 DNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 26 d~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
+.+|+-.|.-+... ...+.+..+...+. --++++|+.+..+++.+.+-|
T Consensus 101 ~~~~~~~yvl~~i~---k~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 149 (150)
T O25318_HELPY/3 101 NPNNEEVFALVRAR---GFDKDALSEGLHKM-SLDNQAVSILVAKVEEIFKDS 149 (150)
T ss_pred cCCCCEEEEEEEec---ccCHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHhc
No 38
>PF13711.10 ; DUF4160 ; Domain of unknown function (DUF4160)
Probab=32.82 E-value=1.4e+02 Score=18.14 Aligned_cols=47 Identities=19% Similarity=0.074 Sum_probs=0.0 Template_Neff=9.500
Q ss_pred EEEEeCCe-eEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhC
Q FD01543557_017 11 LHFYAPGG-VELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKD 60 (110)
Q Consensus 11 ~H~~v~~g-vEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~ 60 (110)
+||||..+ .|.++.- .++.+.-- -++. .....+.+-|+.=.++++..
T Consensus 16 pHvHv~~~~~~a~~~i-~~~~~~~g-~~~~-~~~~~i~~~v~~~~~~l~~~ 63 (65)
T H8GHQ8_METAL/9 16 RHIHIKYGDHEAVMEL-VNLNIIDG-SIPK-KCRQLVREWAELHQEELIEM 63 (65)
T ss_pred CEEEEEECCEEEEEEE-cCCeEEeC-CCCH-HHHHHHHHHHHHHHHHHHHh
No 39
>4JMF_B Probable chaperone; Type III secretion system, T3SS, virulent effector, TOXIN-CHAPERONE complex; 2.099A {Pseudomonas aeruginosa} SCOP: d.198.1.0
Probab=31.73 E-value=1.6e+02 Score=19.51 Aligned_cols=23 Identities=4% Similarity=-0.094 Sum_probs=0.0 Template_Neff=10.400
Q ss_pred eEEEEeCCeeEEEEccCCCCcEEE
Q FD01543557_017 10 GLHFYAPGGVELSVRPDNKGGITF 33 (110)
Q Consensus 10 G~H~~v~~gvEL~v~Pd~~GgI~f 33 (110)
++++.+++ +++.+.++..+.|.+
T Consensus 27 ~~~l~~~~-~~i~l~~~~~~~l~l 49 (116)
T 4JMF_B 27 VLSLQVGP-HLCHLAEHPTDHLLM 49 (116)
T ss_dssp CEEEEETT-EEEEEEECSTTEEEE
T ss_pred eEEEEECC-EEEEEEEcCCCeEEE
No 40
>PF09059.14 ; TyeA ; TyeA
Probab=31.24 E-value=1.9e+02 Score=19.50 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=0.0 Template_Neff=7.800
Q ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 44 PKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 44 ~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
..+...++..=+.|+.|++-|..+++-+..+++.+
T Consensus 43 ~~l~~l~r~lP~~~F~d~e~R~~ll~aiq~~lD~~ 77 (83)
T F8JAD0_HYPSM/2 43 RETRELLAMMPAGVFRDMDARFSVLAGANEAMDQL 77 (83)
T ss_pred HHHHHHHHcCCHhHcCCHHHHHHHHHHHHHHHHHH
No 41
>4ZGJ_M Nitrile hydratase alpha subunit; Nitrile Hydratase, Iron, Hydrolysis, LYASE; HET: CSD; 2.0A {Comamonas testosteroni}
Probab=30.38 E-value=1.5e+02 Score=24.05 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=0.0 Template_Neff=6.800
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
.....+....+..|++||+.|+.....+++.+
T Consensus 41 ~~~~~~lvakaW~D~~fr~~Ll~dP~~~L~e~ 72 (206)
T 4ZGJ_M 41 PQNGAKLVAKAWTDPVFKAQLLSEGVAASESL 72 (206)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHCHHHHHHTT
T ss_pred cchHHHHHHHHhcCHHHHHHHHHcHHHHHHHc
No 42
>7O39_B DivIVA; Cell division, Divisome, molecular ruler, PROTEIN BINDING; 1.3A {Staphylococcus aureus (strain NCTC 8325 / PS 47)}
Probab=30.26 E-value=2.1e+02 Score=17.37 Aligned_cols=48 Identities=8% Similarity=0.088 Sum_probs=0.0 Template_Neff=8.900
Q ss_pred cEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 30 GITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 30 gI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
...|..+|.+ +....|...+..+...+-.-..-...+-..+.+...-+
T Consensus 11 ~~~F~~~~~G-Y~~~eVd~~l~~l~~~~~~~~~~~~~l~~~~~~l~~~l 58 (59)
T 7O39_B 11 NKEFSRVKNG-LEPTEVANFLEQLSTEIERLKEDKKQLEKVIEERDTNI 58 (59)
T ss_dssp TCCCCEEEEE-ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred cCccCccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 43
>6J2U_A Tyrosinase co-factor protein; Citrate synthase, Metallosphaera sedula, OXIDOREDUCTASE; 1.3A {Streptomyces avermitilis} SCOP: d.386.1.0
Probab=29.50 E-value=3.2e+02 Score=20.64 Aligned_cols=45 Identities=18% Similarity=0.265 Sum_probs=0.0 Template_Neff=5.600
Q ss_pred eEEEEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHH
Q FD01543557_017 10 GLHFYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHF 57 (110)
Q Consensus 10 G~H~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~ 57 (110)
+.++.|++ .+|.|-.+.+|+ |..+...-..-..+..+.+.+.+.+
T Consensus 65 ~~~v~IDG-r~L~vmr~~dG~--y~S~v~hY~~f~sl~~~ARaaVd~L 109 (118)
T 6J2U_A 65 GYGVFIDG-MELHVMQNVDGS--WISVVSHYDPVATPRAAARAAVVEL 109 (118)
T ss_dssp -EEEEETT-EEECEEECTTSC--EEETTEEEEEESSHHHHHHHHHHHH
T ss_pred ceEEEECC-EEcEEEEcCCCC--EEECeeCCeecCCHHHHHHHHHHHh
No 44
>7X15_A Mitoguardin 2; MIGA2, FFAT, LD, LIPID TRANSPORT; HET: PEF, MSE; 2.852A {Danio rerio}
Probab=28.96 E-value=5.7e+02 Score=22.05 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=0.0 Template_Neff=5.500
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHH
Q FD01543557_017 49 AIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNV 107 (110)
Q Consensus 49 Ai~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaL 107 (110)
+|++|-+.+++|+..|.+|++..+..+.-+...++ ....+|..-...|
T Consensus 46 CiR~Af~~ll~~~~~r~wl~~~Gr~il~~Ll~~a~-----------kdp~~F~~ayd~l 93 (262)
T 7X15_A 46 CVRQAFQVLLLDETHRMFFMETGKQMISGLLVKAN-----------KSPKAFLESYEDM 93 (262)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHTTT-----------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-----------CChHHHHHHHHHH
No 45
>4UG1_B CELL CYCLE PROTEIN GPSB; CELL CYCLE, PEPTIDOGLYCAN SYNTHESIS, BACTERIAL CELL DIVISION, BACTERIAL GROWTH REGULATION; HET: IMD; 1.6A {LISTERIA MONOCYTOGENES}
Probab=28.60 E-value=1.2e+02 Score=19.74 Aligned_cols=70 Identities=10% Similarity=0.106 Sum_probs=0.0 Template_Neff=8.500
Q ss_pred eEEEEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHh
Q FD01543557_017 10 GLHFYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDH 81 (110)
Q Consensus 10 G~H~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~ 81 (110)
|....+.. .-..+.|..-....|..++.+ +....|...|....+.+-.-..-...|-..+.....-+...
T Consensus 1 ~~~~~~~~-~~~~l~~~~i~~~~F~~~~~G-Yd~~eVd~~l~~l~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 70 (76)
T 4UG1_B 1 GSHMTSEQ-FEYHLTGKEILEKEFKTGLRG-YSPEDVDEFLDMVIKDYSTFTQEIEALQAENIRLVQELDNA 70 (76)
T ss_dssp CCCCCCCC-CCCCCCHHHHHHCCCCEEETC-ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcccccc-cccCCCHHHHHhCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 46
>PF15937.9 ; PrlF_antitoxin ; prlF antitoxin for toxin YhaV_toxin
Probab=28.30 E-value=2.9e+02 Score=18.34 Aligned_cols=67 Identities=10% Similarity=0.153 Sum_probs=0.0 Template_Neff=9.500
Q ss_pred EEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Q FD01543557_017 13 FYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSVLD 80 (110)
Q Consensus 13 ~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~ 80 (110)
+++..|.+|.+....+|.|++++.-.. .....+.+-...+...+...+..-.++.......+.-+..
T Consensus 20 l~l~~g~~l~~~~~~~~~iil~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (99)
T B7KM74_GLOC7/1 20 LGLKKHDKICYTILEDGQVTISRAAQT-ENDPILENFLVFLAQELKKNPQHLQGISANLVSHLKSLVA 86 (99)
T ss_pred hCCCCCCEEEEEECCCCeEEEEccCCC-CCCHHHHHHHHHHHHHHHHCHhheeeCCHHHHHHHHHHhc
No 47
>1LR0_A TolA protein; Domain-Swapping, TolA, TonB, PROTEIN TRANSPORT; HET: MSE; 1.914A {Pseudomonas aeruginosa} SCOP: l.1.1.1, d.212.1.1
Probab=28.07 E-value=3.1e+02 Score=18.66 Aligned_cols=38 Identities=18% Similarity=0.185 Sum_probs=0.0 Template_Neff=10.300
Q ss_pred eEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHH
Q FD01543557_017 19 VELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHF 57 (110)
Q Consensus 19 vEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~ 57 (110)
+.+.+..+.+|.|.-..+..+ ++...+.+++..+...+
T Consensus 54 ~~v~~~i~~~G~v~~~~v~~~-s~~~~~~~~~~~ai~~~ 91 (129)
T 1LR0_A 54 VEVLIEMLPDGTITNASVSRS-SGDKPFDSSAVAAVRNV 91 (129)
T ss_dssp EEEEEEECTTSBEEEEEEEEC-CSCHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEEEEec-CCCHHHHHHHHHHHHhh
No 48
>6M3G_A Histone PARylation factor 1; cofactor, ADP-ribosylation, DNA damage response, NUCLEAR PROTEIN; 1.57A {Homo sapiens}
Probab=27.84 E-value=3.4e+02 Score=23.75 Aligned_cols=66 Identities=12% Similarity=0.086 Sum_probs=0.0 Template_Neff=7.000
Q ss_pred EccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHH
Q FD01543557_017 23 VRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREF 100 (110)
Q Consensus 23 v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~ 100 (110)
|.|-..+.|+|+|+-.+ ...+++-++... +. .+.+-|.++++.....+.+..-.+. ...-+-+.|+
T Consensus 228 vVP~~~~~vGYR~l~~s---~~~Lk~ll~~i~-~~-~~~~~r~~~~~~l~el~t~v~~AnD-------E~d~G~gLeL 293 (346)
T 6M3G_A 228 VVPVDKNDVGYRELPET---DADLKRICKTIV-EA-ASDEERLKAFAPIQEMMTFVQFAND-------ECDYGMGLEL 293 (346)
T ss_dssp CCCCCTTCTTCCCCSSC---HHHHHHHHHHHH-TC-SSHHHHHHHTHHHHHHHHHHHHHHH-------TTCTHHHHHH
T ss_pred eeccCcCCCCcccCCCC---HHHHHHHHHHHH-Hc-CCHHHHHHHHHHHHHHHHHHHHHHH-------cCCcchHHHH
No 49
>4DAM_B Single-stranded DNA-binding protein 1; OB-fold, DNA-binding, single-stranded DNA, DNA BINDING PROTEIN; 1.7A {Streptomyces coelicolor} SCOP: b.40.4.0
Probab=27.32 E-value=1.2e+02 Score=21.03 Aligned_cols=32 Identities=13% Similarity=0.146 Sum_probs=0.0 Template_Neff=9.600
Q ss_pred cceeceEEEEeCCeeEEEEccCCCCcEEEEeCc
Q FD01543557_017 5 DVVQKGLHFYAPGGVELSVRPDNKGGITFTNAI 37 (110)
Q Consensus 5 Dw~tKG~H~~v~~gvEL~v~Pd~~GgI~fk~Vf 37 (110)
+++.||..+.|.+.++... ++.+|.-.....+
T Consensus 79 ~~l~kG~~V~v~G~l~~~~-~~~~g~~~~~~~i 110 (128)
T 4DAM_B 79 GSLAVGDPVVVQGRLKVRT-DVREGQSRTSADI 110 (128)
T ss_dssp HHCCTTCEEEEEEEEEEEE-EEETTEEEEEEEE
T ss_pred hhCCCCCEEEEEEEEEEEE-EccCCcEEEEEEE
No 50
>2KCO_A 30S ribosomal protein S8e; ribosomal protein of unknown function, Ribonucleoprotein, Ribosomal protein, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium; NMR {Sulfolobus solfataricus P2}
Probab=27.12 E-value=1.8e+02 Score=21.71 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred cceeceEEEEeCCe-eEEEEccCCCCcEEEEeC
Q FD01543557_017 5 DVVQKGLHFYAPGG-VELSVRPDNKGGITFTNA 36 (110)
Q Consensus 5 Dw~tKG~H~~v~~g-vEL~v~Pd~~GgI~fk~V 36 (110)
..++||+=+.++.| .-+.=+|++.|.|.-.-+
T Consensus 94 ~iitKg~ii~~~~g~a~itsrPgq~G~~n~~~~ 126 (133)
T 2KCO_A 94 GIIIRGAKIRTEAGLAVVTSRPGQDGVINAVLL 126 (133)
T ss_dssp TCCCTTCEEEESSSEEEEEEEECTTSBEEEEEC
T ss_pred CceecCcEEEEcCCeEEEcCCCCCccEEEEEEE
No 51
>4N9W_A GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase; GT-B, transferase; HET: GDP; 1.94A {Mycobacterium smegmatis}
Probab=27.04 E-value=4.5e+02 Score=20.23 Aligned_cols=48 Identities=19% Similarity=0.117 Sum_probs=0.0 Template_Neff=12.600
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNV 107 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaL 107 (110)
...+.++...++.|++.|+.+.+.+.+........ ..+.++..+++.+
T Consensus 320 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~ 367 (390)
T 4N9W_A 320 ADGMAAALIGILEDDQLRAGYVARASERVHRYDWS-------------VVSAQIMRVYETV 367 (390)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHH-------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhcCHH-------------HHHHHHHHHHHHH
No 52
>6GDT_A Endoglucanase-related protein; Hydrolase, Glucosaminidase, Glucosidase, GH9, CARBOHYDRATE; 3.17A {Vibrio cholerae O1 biovar El Tor str. N16961}
Probab=26.71 E-value=1.7e+02 Score=25.71 Aligned_cols=54 Identities=17% Similarity=0.282 Sum_probs=0.0 Template_Neff=10.200
Q ss_pred cCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHH-HHHHHHHHHHHHHHHHHh
Q FD01543557_017 25 PDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRF-RNDILNKANEAVQSVLDH 81 (110)
Q Consensus 25 Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~-R~~li~~a~~a~~~~~~~ 81 (110)
|....+..+.+++.. .+. .+..+...+- .++.||++ .+.+++.|+++.+++..+
T Consensus 235 ~~~~~~~~~~~~~~~-~~~-~~aaalA~aa-~~~~d~~~~a~~~l~~A~~~~~~~~~~ 289 (582)
T 6GDT_A 235 QQGHKSDDYQAGFRQ-GGG-MAIAALAAAA-RLDTHGEFTQADYLQAAENGYWHLKEH 289 (582)
T ss_dssp TTTEEESCCEECCCC-CCH-HHHHHHHHHT-TSSSCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcccccccccc-hhH-HHHHHHHHHH-HhcCCCCCCHHHHHHHHHHHHHHHHHc
No 53
>PF09104.14 ; BRCA-2_OB3 ; BRCA2, oligonucleotide/oligosaccharide-binding, domain 3
Probab=26.58 E-value=4.2e+02 Score=19.75 Aligned_cols=70 Identities=23% Similarity=0.294 Sum_probs=0.0 Template_Neff=7.400
Q ss_pred ccceeceEEEEeCCeeEEEEccCCCCcEEE-----EeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 4 GDVVQKGLHFYAPGGVELSVRPDNKGGITF-----TNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 4 ~Dw~tKG~H~~v~~gvEL~v~Pd~~GgI~f-----k~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~ 76 (110)
.|.+..|.=+-+-+ |..+++...+|-. ..+|+.......+.+|+.+..+.+-+.++|-...-+++...+.
T Consensus 60 ~d~~~~G~~v~~~N---L~~r~~~~~~i~~~~~se~s~fs~~Pk~~~l~~al~~lk~~i~~~~~fl~~~~~kl~~~l~ 134 (135)
T G3UEA2_LOXAF/8 60 EDIVKPPTLIAASN---LQWRPESASGIPTLFAGDVSTFSASPKEGHFQEAFSRAKNAIENTDVFCNDAEDKLQHILT 134 (135)
T ss_pred ccCCCCCCEEEEEE---eEEecccCCCCcEEEEcCeEEEEcCCCcHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhc
No 54
>5WOY_A Phosphoenolpyruvate-protein phosphotransferase; transferase; NMR {Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)}
Probab=26.56 E-value=4.8e+02 Score=20.35 Aligned_cols=58 Identities=12% Similarity=0.166 Sum_probs=0.0 Template_Neff=9.800
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHH-----------HHHHHHHhccccccchhhHhcchHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANE-----------AVQSVLDHAKRETGSLRDLANGRSREFRDIARNV 107 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~-----------a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaL 107 (110)
..+|-.+...+|.||.|+..+.+.... +++.+...+. ......-+.|+.++..|...|
T Consensus 69 ~~~i~~~~~~lL~D~~l~~~i~~~I~~~~~~a~~A~~~~~~~~~~~~~---~~~~~~l~~r~~Di~d~~~~l 137 (248)
T 5WOY_A 69 KAEIFEAHLMLASDPELIEGVENMIKTELVTADNAVNKVIEQNASVME---SLNDEYLKERAVDLRDVGNRI 137 (248)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH---HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHH
No 55
>PF07166.15 ; DUF1398 ; Protein of unknown function (DUF1398)
Probab=26.23 E-value=3e+02 Score=19.79 Aligned_cols=60 Identities=5% Similarity=-0.069 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred cceeceEEEEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHH
Q FD01543557_017 5 DVVQKGLHFYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILN 69 (110)
Q Consensus 5 Dw~tKG~H~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~ 69 (110)
|+.+.-..++-.+|..+...++...- +|... .....++.||+.....-.+-++|-+.+..
T Consensus 31 ~~~~~~~~y~~~~g~~~~~~~~~~~~----~v~~~-~d~~~l~~ai~~~q~g~~~f~~F~~~~a~ 90 (119)
T H8XP84_FLAIG/8 31 YVTDGHTDYHGGSDFMVTVPAKYEPL----VIADV-PNLEVFKSELIAHQQGKTDYLTFIRMCAE 90 (119)
T ss_pred EEeCCCEEEEcCCCcEEEcCCCCCCc----eecCC-CCHHHHHHHHHHHHCCCCCHHHHHHHHHH
No 56
>4UG3_B CELL CYCLE PROTEIN GPSB; CELL CYCLE, BACTERIAL GROWTH REGULATION, CELL WALL SYNTHESIS, CELL DIVISION; 2.8A {BACILLUS SUBTILIS}
Probab=25.90 E-value=2.3e+02 Score=18.04 Aligned_cols=58 Identities=7% Similarity=0.071 Sum_probs=0.0 Template_Neff=8.700
Q ss_pred EccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHh
Q FD01543557_017 23 VRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDH 81 (110)
Q Consensus 23 v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~ 81 (110)
+.|..-....|..++.+ +....|...+..+.+.+-.-..-...|-..+.....-+...
T Consensus 11 l~~~~i~~~~F~~~~~G-Yd~~eVd~~l~~l~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 68 (71)
T 4UG3_B 11 LSAKEILEKEFKTGVRG-YKQEDVDKFLDMIIKDYETFHQEIEELQQENLQLKKQLEEA 68 (71)
T ss_dssp CCHHHHHHCCCCEETTC-ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHhCcCCcCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 57
>6CQO_D Single-stranded DNA-binding protein RIM1, mitochondrial; Mitochondrial single-stranded DNA binding proteins, Rim1, S. cerevisiae, DNA BINDING PROTEIN; HET: MSE; 2.8A {Saccharomyces cerevisiae}
Probab=25.57 E-value=1.3e+02 Score=19.75 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=0.0 Template_Neff=10.800
Q ss_pred cceeceEEEEeCCeeEEEEccCCCCcEEEEeCc
Q FD01543557_017 5 DVVQKGLHFYAPGGVELSVRPDNKGGITFTNAI 37 (110)
Q Consensus 5 Dw~tKG~H~~v~~gvEL~v~Pd~~GgI~fk~Vf 37 (110)
+++.||..+.|.+-++.....+.+|.-.+...+
T Consensus 60 ~~l~~G~~V~v~G~l~~~~~~~~~g~~~~~~~~ 92 (119)
T 6CQO_D 60 EYVRKGALVYVEADAANYVFERDDGSKGTTLSL 92 (119)
T ss_dssp HHCCTTCEEEEEEEEEEEECCCTTC-CCEEEEE
T ss_pred HhcCCCCEEEEEEEeEeeEEECCCCCEEEEEEE
No 58
>PF20555.2 ; DUF6767 ; Domain of unknown function (DUF6767)
Probab=25.32 E-value=1.9e+02 Score=19.69 Aligned_cols=20 Identities=20% Similarity=0.257 Sum_probs=0.0 Template_Neff=3.300
Q ss_pred HhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 57 FEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 57 ~l~~~~~R~~li~~a~~a~~ 76 (110)
.++||++|+.|-+.-.++..
T Consensus 35 Vm~DpeLre~l~~~r~~~~~ 54 (57)
T A0A4V1BM43_9AC 35 VMSDPDLREQLAELRREAAA 54 (57)
T ss_pred hccCHHHHHHHHHHHHHHHH
No 59
>6TH6_Ak 30S ribosomal protein S8e; T. kodakarensis, ac4C, Ribosome, cryo-EM; HET: ZN, 5MU, 6MZ, 5MC, 4AC, OMU, 4SU, MA6, OMC, OMG, LHH, A2M, LV2; 2.55A {Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)}
Probab=24.83 E-value=1.9e+02 Score=21.79 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=0.0 Template_Neff=6.600
Q ss_pred cceeceEEEEeCCe-eEEEEccCCCCcEEEEeC
Q FD01543557_017 5 DVVQKGLHFYAPGG-VELSVRPDNKGGITFTNA 36 (110)
Q Consensus 5 Dw~tKG~H~~v~~g-vEL~v~Pd~~GgI~fk~V 36 (110)
..++||+.+.++.| .-+.=+|++.|.|.-.-+
T Consensus 93 ~iitKGaII~t~~G~a~vtsRPgq~G~vn~vll 125 (130)
T 6TH6_Ak 93 NIITKGAIIETEIGKAIVTSRPGQDGVVNAVLI 125 (130)
T ss_pred CeeeCCeEEEEeCceEEECCCCccccEEEEEEE
No 60
>PF13590.10 ; DUF4136 ; Domain of unknown function (DUF4136)
Probab=24.78 E-value=3.6e+02 Score=18.75 Aligned_cols=42 Identities=10% Similarity=0.148 Sum_probs=0.0 Template_Neff=10.900
Q ss_pred eEEEEccCCCCcEEEEeCcccCC-----CCHHHHHHHHHHHHHHhhC
Q FD01543557_017 19 VELSVRPDNKGGITFTNAIPNEA-----GSPKVTKAIALAKEHFEKD 60 (110)
Q Consensus 19 vEL~v~Pd~~GgI~fk~Vfs~~~-----~~~~~~kAi~~a~~~~l~~ 60 (110)
++|.|.-...|.++++-.-.... ......+.|..+.+.+|.+
T Consensus 112 l~i~l~d~~t~~~vW~g~~~~~~~~~~~~~~~~~~~i~~~v~~ll~~ 158 (161)
T Q1ISP0_KORVE/2 112 LALEFVDPKAKAVVWIGTVRQSINFELDSKEKTMKLLDKAIVKLIDE 158 (161)
T ss_pred EEEEEEeCCCCeEEEEEEEEeecccccCCHHHHHHHHHHHHHHHHHh
No 61
>7ES0_A Glycosyltransferase; steviol glucosylation, TRANSFERASE; HET: MPO, UDP, 3E6; 1.395A {Oryza sativa subsp. japonica}
Probab=24.75 E-value=5.1e+02 Score=20.04 Aligned_cols=51 Identities=16% Similarity=0.115 Sum_probs=0.0 Template_Neff=13.400
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHhc
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVER 109 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLek 109 (110)
..++.++...++.|++.|+.+.+.+.+..+....... .+.++..+.+.|-+
T Consensus 409 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~ 459 (470)
T 7ES0_A 409 REGVAAAIRAVAVEEESSKVFQAKAKKLQEIVADMAC------------HERYIDGFIQQLRS 459 (470)
T ss_dssp HHHHHHHHCCCCCSHHHHHHHHHHHHHHHHHHTCHHH------------HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHhhh------------hHHHHHHHHHHHHh
No 62
>4ZGJ_M Nitrile hydratase alpha subunit; Nitrile Hydratase, Iron, Hydrolysis, LYASE; HET: CSD; 2.0A {Comamonas testosteroni}
Probab=24.37 E-value=4.3e+02 Score=21.47 Aligned_cols=60 Identities=10% Similarity=0.134 Sum_probs=0.0 Template_Neff=6.800
Q ss_pred eCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Q FD01543557_017 15 APGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSV 78 (110)
Q Consensus 15 v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~ 78 (110)
+..|++++|.=+..+.+.+.-.... ... ...+-.....+..|++||+.|+..-++++..+
T Consensus 77 ip~g~~v~V~e~t~~~~~lvlp~~~-s~~---p~~~lg~~~~~~~D~~fr~~l~~dP~~~l~e~ 136 (206)
T 4ZGJ_M 77 PKAAKHFVVLENTPELHNVICCSLA-SAT---AFTIIGMAPDWYKELEYRARIVRQARTVLKEI 136 (206)
T ss_dssp CTTCCCEEEEECBTTEEEEEECTTS-CCC---CHHHHCSCCGGGGSHHHHHHTTTSHHHHHHHT
T ss_pred CCCCceEEEEecCCCceEEEeeccc-ccc---HHHHhCCCchhhcCHHHHHHHHHhHHHHHHHc
No 63
>4AKX_A SPCU; TRANSPORT PROTEIN, PHOSPHOLIPASE, CHAPERONE, TOXIN; HET: MSE; 2.94A {PSEUDOMONAS AERUGINOSA}
Probab=23.48 E-value=3.6e+02 Score=18.33 Aligned_cols=45 Identities=20% Similarity=0.139 Sum_probs=0.0 Template_Neff=10.200
Q ss_pred eEEEEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHH
Q FD01543557_017 10 GLHFYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHF 57 (110)
Q Consensus 10 G~H~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~ 57 (110)
.+.+.+++++++.+.++ ++.|.+...+.. -+...-....+.+. ++
T Consensus 20 ~~~l~~~~~~~i~l~~~-~~~l~~~~~l~~-~~~~~~~~~~~~lL-~~ 64 (127)
T 4AKX_A 20 TLRLQPAEGPELVMERL-EGGWLFVVELGL-VPSGLPLGVILQLL-QV 64 (127)
T ss_dssp EEEEEESSSCCEEEEEC-SSEEEEEEEEEE-CCSSCCHHHHHHHH-HT
T ss_pred EEEEeeCCCCeEEEEEe-CCeEEEEEEEee-cCCCCChHHHHHHH-Hh
No 64
>3HBF_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, Phenylpropanoid metabolism, Transferase; HET: UDP, MYC; 2.1A {Medicago truncatula} SCOP: c.87.1.0
Probab=23.44 E-value=5.3e+02 Score=19.76 Aligned_cols=51 Identities=18% Similarity=0.242 Sum_probs=0.0 Template_Neff=13.500
Q ss_pred HHHHHHHHHHHhhCHH---HHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHhc
Q FD01543557_017 47 TKAIALAKEHFEKDVR---FRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVER 109 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~---~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLek 109 (110)
..++..+...+++|++ +++...+.++.+.......+. -...+..+++.+.+
T Consensus 401 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~ 454 (454)
T 3HBF_A 401 KESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGT------------SAMDFTTLIQIVTS 454 (454)
T ss_dssp HHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSH------------HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHhcCCC------------ccccHHHHHHHhhC
No 65
>PF12687.11 ; DUF3801 ; Protein of unknown function (DUF3801)
Probab=23.29 E-value=5e+02 Score=19.39 Aligned_cols=58 Identities=9% Similarity=0.148 Sum_probs=0.0 Template_Neff=7.500
Q ss_pred eeEEEEccCCC-CcEEEEeCcccCCCCHHHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHH
Q FD01543557_017 18 GVELSVRPDNK-GGITFTNAIPNEAGSPKVTKAIALAKEHFE---KDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 18 gvEL~v~Pd~~-GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l---~~~~~R~~li~~a~~a~~ 76 (110)
||..+|..+.+ +.=.+.-+|.. .....++.|++......+ ..|.++++|-...+.+.+
T Consensus 65 gV~fav~k~k~~~~g~~~i~f~a-kd~~~i~~a~~~~~~~~~~~~~kpsv~~kl~~~~~~~~~ 126 (136)
T R6V2I4_9FIRM/2 65 GIDYALKKDTSEQPPRYLVFFKG-RDVDVMTQAFKEFSAKTVKQKDKPSLRQKLSRHQEQSKK 126 (136)
T ss_pred CCeEEEEecCCCCCCeEEEEEEe-CCHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
No 66
>3VDY_A Single-stranded DNA-binding protein ssbB; OB fold, single-strand DNA binding, ssDNA, DNA BINDING PROTEIN-DNA complex; 2.8A {Bacillus subtilis}
Probab=22.85 E-value=1.7e+02 Score=18.97 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=0.0 Template_Neff=11.000
Q ss_pred cceeceEEEEeCCeeEEEEccCCCCcEEEEeCc
Q FD01543557_017 5 DVVQKGLHFYAPGGVELSVRPDNKGGITFTNAI 37 (110)
Q Consensus 5 Dw~tKG~H~~v~~gvEL~v~Pd~~GgI~fk~Vf 37 (110)
|++.||-.+.|.+.+.....++.+|.-.....+
T Consensus 66 ~~l~~G~~v~v~G~l~~~~~~~~~g~~~~~~~~ 98 (116)
T 3VDY_A 66 LYCQKGSLVGVSGRIQTRSYENEEGVNVYVTEV 98 (116)
T ss_dssp HHCCTTCEEEEEEEEEEEEEC----CCEEEEEE
T ss_pred HHcCCCCEEEEEEEEEEeEEECCCCcEEEEEEE
No 67
>PF14395.10 ; COOH-NH2_lig ; Phage phiEco32-like COOH.NH2 ligase-type 2
Probab=22.83 E-value=68 Score=26.67 Aligned_cols=11 Identities=36% Similarity=0.374 Sum_probs=0.0 Template_Neff=6.900
Q ss_pred eEEEEeCCeeEE
Q FD01543557_017 10 GLHFYAPGGVEL 21 (110)
Q Consensus 10 G~H~~v~~gvEL 21 (110)
|.|||||+ +++
T Consensus 94 GGHIH~g~-~~~ 104 (253)
T D5WPR4_KYRT2/2 94 GGHIHFSG-VPP 104 (253)
T ss_pred cCEEEecC-CCc
No 68
>6TX2_A Histone PARylation factor 1; PARP1, PARP2, ADP-ribosylation, serine ADP-ribosylation, C4orf27, PROTEIN BINDING; 2.09A {Homo sapiens}
Probab=22.80 E-value=4.9e+02 Score=22.45 Aligned_cols=66 Identities=12% Similarity=0.086 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred EccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHH
Q FD01543557_017 23 VRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREF 100 (110)
Q Consensus 23 v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~ 100 (110)
|.|...+.|+|+++-.+ ...+++-++... +. .+++-|.+.++.....+.+..-.+. ...-|-+.|+
T Consensus 200 vVP~~~~~vGYR~l~~~---~~~lk~ll~~~~-~~-~~~~~r~~~~~~l~el~t~~~~A~D-------E~d~G~gLel 265 (318)
T 6TX2_A 200 VVPVDKNDVGYRELPET---DADLKRICKTIV-EA-ASDEERLKAFAPIQEMMTFVQFAND-------ECDYGMGLEL 265 (318)
T ss_dssp CCCCCTTCTTCCCCSSC---HHHHHHHHHHHH-TC-SSHHHHHHHTHHHHHHHHHHHHHHH-------TTCTHHHHHH
T ss_pred eeccCcCCCCcccCCCC---HHHHHHHHHHHH-Hc-CCHHHHHHHHHHHHHHHHHHHHHHH-------cCCcchHHHH
No 69
>4NG2_H Uncharacterized protein; Quorum sensing, antiactivator, Transcription Regulator; HET: OHN; 2.413A {Pseudomonas aeruginosa}
Probab=22.60 E-value=2.4e+02 Score=21.40 Aligned_cols=72 Identities=13% Similarity=0.122 Sum_probs=0.0 Template_Neff=4.900
Q ss_pred EEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHH
Q FD01543557_017 20 ELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSRE 99 (110)
Q Consensus 20 EL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E 99 (110)
...+.|..+|.-.+.--.+. .-...|+..+..|+ .+|.++ -...|-..+-..++....... ..+.|
T Consensus 30 ~~a~lPa~Dg~P~l~t~w~~-~~q~avd~Gv~~Ae-~WL~~~-~~~~LW~~La~~R~~~~~g~~-----------R~AFE 95 (113)
T 4NG2_H 30 LMVEIPPADRQPGLSLLWPV-PAQPAIDKGVRQAE-NWLADQ-IEGQLWTAFAFGRDSLPTPMQ-----------KTAFE 95 (113)
T ss_dssp TEEEECCCSSSCCEEEECSS-CCHHHHHHHHHHHH-HHHSSS-SCCCHHHHHHHHHTTSSSHHH-----------HHHHH
T ss_pred eeEecCcccCCCCccCCCCh-hhHHHHHHHHHHHH-HHhhcC-CCccHHHHHHHHHHhCCCchh-----------HHHHH
Q ss_pred HHHHHH
Q FD01543557_017 100 FRDIAR 105 (110)
Q Consensus 100 ~~~L~k 105 (110)
.-||.+
T Consensus 96 aGFL~R 101 (113)
T 4NG2_H 96 VAFLTR 101 (113)
T ss_dssp HHHHHH
T ss_pred HHHHHH
No 70
>PF14035.10 ; YlzJ ; YlzJ-like protein
Probab=22.50 E-value=2.5e+02 Score=18.37 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=0.0 Template_Neff=7.000
Q ss_pred EEeCCeeEEEEccCCCCcEEEEeCcccCCCCH
Q FD01543557_017 13 FYAPGGVELSVRPDNKGGITFTNAIPNEAGSP 44 (110)
Q Consensus 13 ~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~ 44 (110)
+.+++ +=|.|.|.++|+.....++|. .+.+
T Consensus 24 ~~~~g-~~l~v~~~~~~~~~I~RliST-dP~d 53 (65)
T H6NPB0_9BACL/3 24 IVMNG-VMMQVQPLNGQQATIVRLLSG-NPQD 53 (65)
T ss_pred EEECC-EEEEEEECCCCeEEEEEEEeC-CHHH
No 71
>PF12021.12 ; DUF3509 ; Protein of unknown function (DUF3509)
Probab=22.45 E-value=2e+02 Score=20.39 Aligned_cols=56 Identities=14% Similarity=0.229 Sum_probs=0.0 Template_Neff=6.100
Q ss_pred eCCeeEEEEc-cCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 15 APGGVELSVR-PDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 15 v~~gvEL~v~-Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~ 76 (110)
+.+ -++.+. |..+|++...-.-.. .+. .+.++|.... +.|+.--+++|+..+.-+.
T Consensus 10 f~~-y~V~~~~~RPDG~~lLtL~~~~-~~~-~~~RvI~~~q---l~~~~~l~~~I~~irrDLa 66 (88)
T Q88MU5_PSEPK/3 10 LTP-YQTHLGTADPSGNRQLTVHDPL-SGI-TLRRTVSERQ---LQEQRLLIDLVDGLHRDLQ 66 (88)
T ss_pred CCC-cEEEEEeeCCCCCEEEEEEcCC-CCe-EEEEEeCHHH---HcCHHHHHHHHHHHHHHHH
No 72
>4OB1_A Cobalt-containing nitrile hydratase subunit alpha; Nitrile Hydratase, Nulceophile, hydrolase; 1.631A {Pseudonocardia thermophila} SCOP: d.149.1.1
Probab=22.22 E-value=2.3e+02 Score=23.86 Aligned_cols=62 Identities=6% Similarity=0.099 Sum_probs=0.0 Template_Neff=7.500
Q ss_pred EEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-HHH
Q FD01543557_017 13 FYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNKANEAV-QSV 78 (110)
Q Consensus 13 ~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~-~~~ 78 (110)
+.+..|++|.|.-+....+.+.-........ ...+.... .+..|++||+.|++.-.+++ +.+
T Consensus 165 ~~~p~~~~v~v~e~t~~~~~lVlP~~~~~~~---~~~~~~~~-~~~~D~~fr~~l~~dP~~~l~~~~ 227 (290)
T 4OB1_A 165 IGGLQGEDMMWVENTDEVHHVVVCTLASCYP---WPVLGLPP-NWFKEPQYRSRVVREPRQLLKEEF 227 (290)
T ss_dssp CCCTTCSEEEEEECCSSEEEEEECTTSCCCC---HHHHCSCC-HHHHSHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCeEEEEecCCCcEEEEEccccccCC---hhhcCCCC-chhcCHHHHHHHHhCHHHHHHHHH
No 73
>3RSC_A CalG2; TDP, enediyne, Structural Genomics, PSI-2, Protein Structure Initiative, Center for Eukaryotic Structural Genomics, CESG, Glycosyltransferase, transferase-antibiotic; HET: TYD, PO4, MSE, C0T; 2.19A {Micromonospora echinospora}
Probab=22.20 E-value=4.4e+02 Score=20.21 Aligned_cols=30 Identities=7% Similarity=-0.007 Sum_probs=0.0 Template_Neff=13.000
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~ 76 (110)
.+++.++...+++||+.|+.+.+.+....+
T Consensus 368 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 397 (415)
T 3RSC_A 368 GDTLLAAVGAVAADPALLARVEAMRGHVRR 397 (415)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
No 74
>8IYJ_b1 Coiled-coil domain-containing protein 105; doublet microtubule, STRUCTURAL PROTEIN; HET: GDP, GTP, MG; 3.5A {Mus musculus}
Probab=22.14 E-value=9.1e+02 Score=22.02 Aligned_cols=62 Identities=11% Similarity=0.150 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred CHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHh
Q FD01543557_017 43 SPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVE 108 (110)
Q Consensus 43 ~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLe 108 (110)
+.....+|..|.........+|..+-.-...+...+..... ..-.--..|..|+..++..|+
T Consensus 290 t~~~~~~l~~A~~~~~~S~~lr~~~~~~l~~~~~~~~~~~~----~vn~aL~~ri~Et~~~k~~L~ 351 (499)
T 8IYJ_b1 290 TPACAKALFEAKRLLMESKDILTEMAKNEVDIQNQQQEISN----RVCSSLAQKMRETLELKERMT 351 (499)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
No 75
>5DGR_A Putative endoglucanase-related protein; Glycoside Hydrolase family 9, alpha-alpha-6 barrel, exo-D-beta-glucosaminidase, HYDROLASE; HET: GCS; 1.9A {Photobacterium profundum}
Probab=22.00 E-value=2.4e+02 Score=25.00 Aligned_cols=54 Identities=11% Similarity=0.144 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred cCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhh---------CHHH-HHHHHHHHHHHHHHHHHh
Q FD01543557_017 25 PDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEK---------DVRF-RNDILNKANEAVQSVLDH 81 (110)
Q Consensus 25 Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~---------~~~~-R~~li~~a~~a~~~~~~~ 81 (110)
|....+..+.++|+. ... .+..|...+- .++. ||++ .+.+++.|+++.+++..+
T Consensus 234 ~~~~~~~~~~~~~~~-~~~-~~aaalA~aa-~~~~~~~~~~~~~d~~~~a~~~l~~A~~~~~~a~~~ 297 (586)
T 5DGR_A 234 QDGHKSADYQAGFRQ-GAG-VAIAALAAAS-RLSNLASTSRIPQCGDIKADTYLEAAKKGYWHLKEM 297 (586)
T ss_dssp TTTEEESCCBCCCCC-CCH-HHHHHHHHHT-TGGGSHHHHHSCCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccccccccchh-HHH-HHHHHHHHHH-HHhhhhcCCCCCccCCcCHHHHHHHHHHHHHHHHHh
No 76
>PF07386.15 ; DUF1499 ; Protein of unknown function (DUF1499)
Probab=21.96 E-value=1.7e+02 Score=20.64 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=0.0 Template_Neff=8.400
Q ss_pred ceeceEEEEeCCeeEEEEccCCCC--cEEEEe
Q FD01543557_017 6 VVQKGLHFYAPGGVELSVRPDNKG--GITFTN 35 (110)
Q Consensus 6 w~tKG~H~~v~~gvEL~v~Pd~~G--gI~fk~ 35 (110)
|.++..-+..++-+|+.+.|.++| .|.+..
T Consensus 61 ~~~~t~~~~~~ddv~v~~~~~~~~~t~v~v~S 92 (115)
T A5FW00_ACICJ/3 61 WVARTPAANFPDVVIAQIRPDPAGGSDLILYS 92 (115)
T ss_pred EEEEeCCCCCCcEEEEEEEECCCCceEEEEEE
No 77
>PF11416.12 ; Syntaxin-5_N ; Syntaxin-5 N-terminal, Sly1p-binding domain
Probab=21.94 E-value=1.9e+02 Score=14.09 Aligned_cols=17 Identities=29% Similarity=0.571 Sum_probs=0.0 Template_Neff=8.400
Q ss_pred cchHHHHHHHHHHHhcC
Q FD01543557_017 94 NGRSREFRDIARNVERH 110 (110)
Q Consensus 94 ~~Ra~E~~~L~kaLek~ 110 (110)
++|..||..+.+.+.+.
T Consensus 7 ~dRT~eF~~~~~~~~~~ 23 (23)
T M2WI56_DOTSN/7 7 QDRTPEFRSILAQAQKS 23 (23)
T ss_pred CCCHHHHHHHHHHHhcC
No 78
>PF00333.24 ; Ribosomal_S5 ; Ribosomal protein S5, N-terminal domain
Probab=21.90 E-value=3.2e+02 Score=16.71 Aligned_cols=33 Identities=21% Similarity=0.164 Sum_probs=0.0 Template_Neff=9.200
Q ss_pred EEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHH
Q FD01543557_017 21 LSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAK 54 (110)
Q Consensus 21 L~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~ 54 (110)
+.+.-+.+|.+.|-.-.+. .....+.+|+..|.
T Consensus 26 ~v~vGn~~G~~G~g~g~~~-~~~~ai~~a~~~A~ 58 (65)
T R5SQF4_9FIRM/1 26 VVVVGDGKGRVGAGLGKAA-EVPEAIRKGVEDAK 58 (65)
T ss_pred EEEeeCCCCcEEEeecCCc-cHHHHHHHHHHHHH
No 79
>6HLN_B Genome polyprotein; complex, Golgi, enterovirus, picornavirus, VIRAL PROTEIN; 2.1A {Homo sapiens}
Probab=21.83 E-value=1.7e+02 Score=20.08 Aligned_cols=44 Identities=16% Similarity=0.032 Sum_probs=0.0 Template_Neff=4.400
Q ss_pred CCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHH
Q FD01543557_017 26 DNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRFRNDILNK 70 (110)
Q Consensus 26 d~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~~ 70 (110)
+..|-+.|+++.-+.+.......||.+.+ .+..+++.|+.+.++
T Consensus 1 ~~QGP~~~~~l~i~v~~~~p~P~~I~DLL-~Sv~s~eV~~Yc~~k 44 (63)
T 6HLN_B 1 GAMGPPQFKEIKISVAPDTPAPDAINDLL-RSVDSQEVRDYCQKK 44 (63)
T ss_dssp ------------------CCCHHHHHHHH-HHHCCHHHHHHHHHT
T ss_pred CCCCCCcccccccCCCCCCCCCHHHHHHH-hcCCCHHHHHHHHHc
No 80
>PF06236.15 ; MelC1 ; Tyrosinase co-factor MelC1
Probab=21.31 E-value=4.1e+02 Score=20.05 Aligned_cols=50 Identities=18% Similarity=0.248 Sum_probs=0.0 Template_Neff=4.900
Q ss_pred eEEEEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHHhhCHHH
Q FD01543557_017 10 GLHFYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHFEKDVRF 63 (110)
Q Consensus 10 G~H~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~l~~~~~ 63 (110)
+..+.|++ .||.|-.+.+| .|..+...-..-..+..+.+.+. +.|.+.++
T Consensus 57 ~~~V~IDG-r~LhVmr~adG--~y~S~v~hYe~f~Sl~~~ARAAV-D~Lgga~L 106 (109)
T K4RFH5_STRDJ/1 57 GYGVFVDG-VELHVMRNADG--SWISVVSHYDPVATPRAAARAAV-DELQGAAL 106 (109)
T ss_pred ceEEEECC-EEeEEEECCCC--CEEecccCCeeeCCHHHHHHHHH-HHhccccc
No 81
>5W8X_A Lipid-A-disaccharide synthase; glycosyltransferase B, Rossmann-like, C-terminal swap, dimer, lipid A disaccharide synthase, Raetz pathway, lipid A synthesis pathway; HET: UDP; 1.98A {Escherichia coli BL21(DE3)}
Probab=21.18 E-value=5e+02 Score=19.80 Aligned_cols=43 Identities=12% Similarity=0.057 Sum_probs=0.0 Template_Neff=12.800
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREF 100 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~ 100 (110)
...+.++...++.|++.|+.+.+++.+..+.+....+ .+..+.
T Consensus 334 ~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 376 (382)
T 5W8X_A 334 PQKLAAALLPLLANGKTSHAMHDTFRELHQQIRCNAD-----------EQAAQA 376 (382)
T ss_dssp HHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHTCSCHH-----------HHHHHH
T ss_pred HHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHhcCcH-----------HHHHHH
No 82
>1ZRU_A lactophage p2 receptor binding protein; 3 domains: BETA BARREL, BETA PRISM, BETA BARREL, Structural Genomics, Structural Proteomics in Europe, SPINE, VIRAL; HET: GOL; 1.73A {Lactococcus lactis phage p2} SCOP: b.163.1.2, b.108.1.4, b.21.1.3
Probab=21.12 E-value=3e+02 Score=22.45 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=0.0 Template_Neff=8.400
Q ss_pred CCccceeceEEEEeCCeeEEEEccCCCCcEEEE
Q FD01543557_017 2 GYGDVVQKGLHFYAPGGVELSVRPDNKGGITFT 34 (110)
Q Consensus 2 ~~~Dw~tKG~H~~v~~gvEL~v~Pd~~GgI~fk 34 (110)
+.|+++..|-||.+.. ..|.+.|...|-|..+
T Consensus 56 ~~g~~~i~GR~~~~~~-~~vt~~~~~~g~i~~~ 87 (264)
T 1ZRU_A 56 TNTSIIAGGRYFELLN-ETVALKGDSVNYIHAN 87 (264)
T ss_dssp EEEEEEETTEEEEEEE-EEEECCTTSEEEEEEE
T ss_pred CCCEEEEcceEEEEcc-EEeecCCCCccEEEEE
No 83
>6EZ3_D Cyclo(L-leucyl-L-leucyl) synthase; tRNA, cyclodipeptide, RNA BINDING PROTEIN; HET: SO4; 3.0A {Staphylococcus haemolyticus (strain JCSC1435)}
Probab=21.01 E-value=6e+02 Score=20.34 Aligned_cols=35 Identities=20% Similarity=0.274 Sum_probs=0.0 Template_Neff=8.500
Q ss_pred CCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 42 GSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 42 ~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~ 76 (110)
..+..++..+...+.+..|+.||+.+..-+...+.
T Consensus 114 ~~~~y~~~~~~v~~~y~~n~~Fr~~v~~~~~~~l~ 148 (234)
T 6EZ3_D 114 NNIYYIDIYKTIVDQFNTDSNFKNSCLKMSLQALQ 148 (234)
T ss_dssp TCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
No 84
>2IYA_B OLEANDOMYCIN GLYCOSYLTRANSFERASE; CARBOHYDRATE, GLYCOSYLATION, GLYCOSYLTRANSFERASE, ENZYME, MACROLIDE, TRANSFERASE; HET: ZIO, UDP; 1.7A {STREPTOMYCES ANTIBIOTICUS}
Probab=20.99 E-value=4.8e+02 Score=19.79 Aligned_cols=30 Identities=10% Similarity=0.028 Sum_probs=0.0 Template_Neff=13.400
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~ 76 (110)
..++..+...+++|++.|+.+.+.+....+
T Consensus 376 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 405 (424)
T 2IYA_B 376 AEKLREAVLAVASDPGVAERLAAVRQEIRE 405 (424)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCHhHHHHHHHHHHHHHH
No 85
>7Q3S_A Glycosyltransferase; UGT, silibinin, glycosyltransferase, TRANSFERASE; HET: UDP; 1.59A {Zea mays}
Probab=20.94 E-value=6.1e+02 Score=19.55 Aligned_cols=55 Identities=18% Similarity=0.190 Sum_probs=0.0 Template_Neff=13.700
Q ss_pred HHHHHHHHHHHhhCHH---HHHHHHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHhcC
Q FD01543557_017 47 TKAIALAKEHFEKDVR---FRNDILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVERH 110 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~---~R~~li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLek~ 110 (110)
..++..+...+++|++ +|+...+-++.+.++....+... ....++-.....+...
T Consensus 425 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 482 (488)
T 7Q3S_A 425 SEEVEAKVRLVMESEEGRHLRGRAVALKNEAQAALRDDGPSE---------TSFARFLFDAKNLQGH 482 (488)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTTSHHH---------HHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhCcchhcHHHHHHHHHHHHHHHhcCCCCch---------HHHHHHHHHHHHhccc
No 86
>7C2X_A Glycosyltransferase; UDP-glucuronosyltransferase, GT-B fold, Glycyrrhizin synthesis, TRANSFERASE; HET: FJL, UDP; 1.89A {Glycyrrhiza uralensis}
Probab=20.88 E-value=6.5e+02 Score=19.86 Aligned_cols=53 Identities=4% Similarity=0.014 Sum_probs=0.0 Template_Neff=13.300
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHh---ccccccchhhHhcchHHHHHHHHHHHhcC
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQSVLDH---AKRETGSLRDLANGRSREFRDIARNVERH 110 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~~~~~~---~~~~~~~~~~la~~Ra~E~~~L~kaLek~ 110 (110)
...+..+...++.|++.|..+.+++.+..+.+... .. .....+..++..+.+.
T Consensus 437 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 492 (514)
T 7C2X_A 437 REDIGKAIAFLMGGGDESLEMRKRVKVLSGATKKAIQVDG-----------SSYTKLKELIEELKSI 492 (514)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHSTTS-----------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCC-----------chHHHHHHHHHHHHhc
No 87
>4OLP_C GrpU microcompartment shell protein; bacterial microcompartment, glycyl-radical propanediol, BMC shell protein, iron-sulfur cluster, electron transport; 2.79A {Pectobacterium wasabiae}
Probab=20.85 E-value=2.1e+02 Score=20.93 Aligned_cols=45 Identities=18% Similarity=0.156 Sum_probs=0.0 Template_Neff=6.300
Q ss_pred cceeceEEEEeCCeeEEEEccCCCCcEEEEeCcccCCCCHHHHHHHHHHHHHH
Q FD01543557_017 5 DVVQKGLHFYAPGGVELSVRPDNKGGITFTNAIPNEAGSPKVTKAIALAKEHF 57 (110)
Q Consensus 5 Dw~tKG~H~~v~~gvEL~v~Pd~~GgI~fk~Vfs~~~~~~~~~kAi~~a~~~~ 57 (110)
|.+.|.+-+.+-. ++. +.| |+..+.-+... ..+|+.|+..+.+.+
T Consensus 52 D~a~Kaa~V~l~~-~~~-~~~---gg~~~i~i~G~---va~V~~A~~aa~~~~ 96 (107)
T 4OLP_C 52 DQASKSAHVAVSE-IFG-SCP---QHITTLAIFGE---VAAVNEAMRIIEDDA 96 (107)
T ss_dssp HHHHHHCSEEEEE-EC----------CEEEEEEEC---HHHHHHHHHHHTC--
T ss_pred HHHHHhCcEEEEE-EEe-ecC---CCEEEEEEEEC---HHHHHHHHHHHHHHH
No 88
>PF16715.9 ; CDPS ; Cyclodipeptide synthase
Probab=20.54 E-value=6.5e+02 Score=19.86 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=0.0 Template_Neff=8.600
Q ss_pred CCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 42 GSPKVTKAIALAKEHFEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 42 ~~~~~~kAi~~a~~~~l~~~~~R~~li~~a~~a~~ 76 (110)
..+..+...+.....+.+|+.||+.+..-+...+.
T Consensus 112 ~~~~y~~~~~~v~~~y~~d~~Fr~~v~~~~~~~l~ 146 (219)
T C6WMU7_ACTMD/1 112 GGEVYRARLAECERALREDEVLRGTSAEMSREVLA 146 (219)
T ss_pred CCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
No 89
>1Z0J_B FYVE-finger-containing Rab5 effector protein rabenosyn-5; Rab Effector, Rab GTPase, Rab22 GTPase, Rabenosyn, Endosomal trafficking, Protein transport; HET: GTP; 1.32A {Mus musculus} SCOP: a.2.19.1
Probab=20.47 E-value=4.3e+02 Score=17.69 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=0.0 Template_Neff=5.100
Q ss_pred HHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHhc
Q FD01543557_017 67 ILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVER 109 (110)
Q Consensus 67 li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLek 109 (110)
|+.+..-.+.|+.+.... +|..|+..|..+|..
T Consensus 14 l~qQi~~Ik~yi~qAr~a----------gr~dEV~~Le~NL~e 46 (59)
T 1Z0J_B 14 LLQQIDNIKAYIFDAKQC----------GRLDEVEVLTENLRE 46 (59)
T ss_dssp HHHHHHHHHHHHHHHHHS----------SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHH
No 90
>1JG7_A DNA BETA-GLUCOSYLTRANSFERASE; Glycosyltransferase, TRANSFERASE; HET: UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1
Probab=20.36 E-value=4.9e+02 Score=20.02 Aligned_cols=30 Identities=7% Similarity=0.187 Sum_probs=0.0 Template_Neff=12.100
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKANEAVQ 76 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a~~a~~ 76 (110)
...+.+....++.||+.|+.+-+++.+...
T Consensus 303 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 332 (351)
T 1JG7_A 303 RAELIDRVNELKHSDVLRKEMLSIQHDILN 332 (351)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
No 91
>4O8W_E Spore germination protein; superhelical rope fold, scaffold, spore inner membrane, structural protein, signaling protein; 2.293A {Geobacillus kaustophilus}
Probab=20.28 E-value=1.8e+02 Score=22.24 Aligned_cols=32 Identities=6% Similarity=0.082 Sum_probs=0.0 Template_Neff=5.500
Q ss_pred cccCCCCHHHHHHHHHHHHHHhhCHHHHHHHHH
Q FD01543557_017 37 IPNEAGSPKVTKAIALAKEHFEKDVRFRNDILN 69 (110)
Q Consensus 37 fs~~~~~~~~~kAi~~a~~~~l~~~~~R~~li~ 69 (110)
|.. .-.+.+.+.-+....++++||++++.+++
T Consensus 41 Fa~-~~akam~~e~~~l~k~LMkDPeyq~~m~~ 72 (125)
T 4O8W_E 41 FAE-SFAKGLQAEHEKMMRALMKDPDYQALMID 72 (125)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHhcCHHHHHHHHH
No 92
>5T12_A Phosphoenolpyruvate--protein phosphotransferase; PTSNtr, phosphotransfer, TRANSFERASE; 2.299A {Escherichia coli}
Probab=20.10 E-value=6.8e+02 Score=19.74 Aligned_cols=54 Identities=17% Similarity=0.318 Sum_probs=0.0 Template_Neff=9.600
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHH--------------HHHHHHHHHhccccccchhhHhcchHHHHHHHHHHH
Q FD01543557_017 47 TKAIALAKEHFEKDVRFRNDILNKA--------------NEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNV 107 (110)
Q Consensus 47 ~kAi~~a~~~~l~~~~~R~~li~~a--------------~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaL 107 (110)
.+.|=.+...+|.||.|+..+.+.. +.....+..... ..-+.|+.++..|...|
T Consensus 69 ~~~il~a~~~ll~D~~l~~~i~~~I~~~~~a~~Ai~~~~~~~~~~~~~~~~-------~~~~~r~~Di~d~~~~l 136 (255)
T 5T12_A 69 TAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVIEKFAEQFAALSD-------NYLKERAGDLRALGQRL 136 (255)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTBCHHHHHHHHHHHHHHHHHTCCC-------HHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHHHHH
No 93
>1Z0K_D FYVE-finger-containing Rab5 effector protein rabenosyn-5; Rab GTPases, Rab4, Rabenosyn, effector complex, vesicular trafficking, protein transport; HET: MES, GTP; 1.92A {Homo sapiens} SCOP: a.2.19.1
Probab=20.07 E-value=4.2e+02 Score=18.22 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=0.0 Template_Neff=5.300
Q ss_pred HHHHHHHHHHHHHHhccccccchhhHhcchHHHHHHHHHHHhc
Q FD01543557_017 67 ILNKANEAVQSVLDHAKRETGSLRDLANGRSREFRDIARNVER 109 (110)
Q Consensus 67 li~~a~~a~~~~~~~~~~~~~~~~~la~~Ra~E~~~L~kaLek 109 (110)
|+.+..-...|+.+.... +|..|+..|..+|+.
T Consensus 25 l~qQi~~I~~yi~qAr~a----------gr~dEv~~Le~nL~e 57 (69)
T 1Z0K_D 25 LLQQIHNITSFIRQAKAA----------GRMDEVRTLQENLRQ 57 (69)
T ss_dssp HHHHHHHHHHHHHHHHHT----------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHH