Query FD01845429_02373 type IV secretion protein Rhs
Match_columns 117
No_of_seqs 3 out of 7
Neff 1.44574
Searched_HMMs 86581
Date Tue Feb 27 18:59:50 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/7286912.hhr -oa3m ../results/7286912.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF11906.12 ; DUF3426 ; Protein 48.9 83 0.00096 21.2 4.2 30 69-102 70-99 (144)
2 PF14186.10 ; Aida_C2 ; Axin in 42.7 90 0.001 23.9 4.0 37 65-102 10-46 (143)
3 PF07504.17 ; FTP ; Fungalysin/ 41.0 91 0.001 16.4 2.8 29 57-85 22-51 (51)
4 2QZQ_A Axin interactor, dorsal 38.1 94 0.0011 24.0 3.5 34 66-100 13-46 (152)
5 3GM5_A Lactoylglutathione lyas 38.0 1.5E+02 0.0017 18.1 4.3 43 27-71 113-155 (159)
6 3RMU_A Methylmalonyl-CoA epime 36.4 1.4E+02 0.0016 17.3 4.1 45 27-71 86-131 (134)
7 6QLZ_A E3 ubiquitin-protein li 33.6 1.1E+02 0.0013 16.8 2.6 21 57-77 6-26 (101)
8 PF19670.3 ; DUF6173 ; Family o 33.1 1.7E+02 0.002 21.0 3.9 30 42-71 44-73 (102)
9 3BQX_A Glyoxalase-related enzy 31.9 2.2E+02 0.0025 18.1 4.8 64 25-90 79-142 (150)
10 2W4Y_A CAULOBACTER 5 VIRUS-LIK 28.7 2.6E+02 0.003 20.5 4.3 38 43-84 19-56 (122)
11 PF02983.18 ; Pro_Al_protease ; 27.4 1.1E+02 0.0013 19.2 2.1 16 61-76 25-40 (56)
12 PF11433.12 ; DUF3198 ; Protein 25.4 73 0.00084 21.2 1.0 21 20-40 16-36 (49)
13 PF20442.2 ; BrxL_N ; BREX syst 25.0 1.3E+02 0.0015 22.4 2.3 25 16-40 10-34 (132)
14 2BUZ_A PROTOCATECHUATE 3,4-DIO 23.6 2.5E+02 0.0029 21.4 3.6 71 42-112 70-157 (209)
15 PF15613.10 ; WSD ; Williams-Be 23.1 2.4E+02 0.0028 17.1 2.9 21 49-72 8-29 (69)
16 PF06887.18 ; DUF1265 ; Protein 22.6 1E+02 0.0012 21.1 1.3 24 22-45 3-26 (46)
17 6WFI_A Methylmalonyl-CoA epime 21.9 2.7E+02 0.0032 17.4 3.0 29 52-80 116-144 (146)
18 PF04229.18 ; GrpB ; GrpB prote 21.4 2.9E+02 0.0034 19.6 3.4 31 63-94 21-51 (161)
19 5ZE8_A cytochrome c552; cytoch 21.3 4.4E+02 0.0051 21.5 4.7 37 66-102 295-335 (435)
20 5F6Q_A Metallothiol transferas 21.2 1.9E+02 0.0022 17.8 2.2 35 56-90 104-138 (142)
21 1X9B_A hypothetical membrane p 20.4 1E+02 0.0012 20.8 1.0 21 20-40 19-39 (53)
No 1
>PF11906.12 ; DUF3426 ; Protein of unknown function (DUF3426)
Probab=48.89 E-value=83 Score=21.24 Aligned_cols=30 Identities=7% Similarity=0.254 Sum_probs=0.0 Template_Neff=9.800
Q ss_pred EEEEEeecCccccCCCCCCCceeeEeecCCCcee
Q FD01845429_023 69 IEIEIAHTGHRSVNGGMEPPHMKVKTKDANNKTT 102 (117)
Q Consensus 69 i~ieia~tghks~~gg~epphikvk~kdannk~~ 102 (117)
|+-+|.|++.+...- |.|++...|.+++++
T Consensus 70 v~g~i~N~~~~~~~~----p~i~v~l~d~~g~~i 99 (144)
T Q1GX87_METFK/1 70 LSTKLINNANYAQAY----PMLELTLTDDEDQPK 99 (144)
T ss_pred EEEEEEECCCCcccC----CEEEEEEECCCCCEE
No 2
>PF14186.10 ; Aida_C2 ; Axin interactor dorsalisation-associated protein, C-terminal
Probab=42.73 E-value=90 Score=23.85 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=0.0 Template_Neff=6.400
Q ss_pred CCCEEEEEEeecCccccCCCCCCCceeeEeecCCCcee
Q FD01845429_023 65 NGNRIEIEIAHTGHRSVNGGMEPPHMKVKTKDANNKTT 102 (117)
Q Consensus 65 ~gnri~ieia~tghks~~gg~epphikvk~kdannk~~ 102 (117)
.+..+.|.|...|-++... +.-|+|.|.+.|++....
T Consensus 10 g~~~lsi~iekiglkda~~-~~~P~i~VSV~D~~G~~l 46 (143)
T D0N3A7_PHYIT/1 10 DSTYVSVFLGAIAVATGPI-METPHFNLYIMDYKGAVV 46 (143)
T ss_pred CCceEEEEEEEeEeCCccc-ccCCEEEEEEEcCCCCcc
No 3
>PF07504.17 ; FTP ; Fungalysin/Thermolysin Propeptide Motif
Probab=41.03 E-value=91 Score=16.42 Aligned_cols=29 Identities=10% Similarity=0.360 Sum_probs=0.0 Template_Neff=10.700
Q ss_pred EeeccEecCCCEEEEEEeecCc-cccCCCC
Q FD01845429_023 57 RFFDGKDINGNRIEIEIAHTGH-RSVNGGM 85 (117)
Q Consensus 57 ~~fdgvd~~gnri~ieia~tgh-ks~~gg~ 85 (117)
.+++|+.+-|..+.+.+...|- .+.+|.+
T Consensus 22 q~~~gi~V~~~~~~~~~~~~g~~~~~~~~~ 51 (51)
T H6NTM1_9BACL/1 22 QKYRGVPVYGKYINLHLDSSKKAYAIQNQL 51 (51)
T ss_pred EEECCEEEeCcEEEEEECCCCcEEEEeccC
No 4
>2QZQ_A Axin interactor, dorsalization associated protein; beta sheet sandwich, Coiled coil, SIGNALING PROTEIN, LIPID BINDING PROTEIN; HET: MSE; 1.9A {Danio rerio}
Probab=38.11 E-value=94 Score=24.05 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=0.0 Template_Neff=6.300
Q ss_pred CCEEEEEEeecCccccCCCCCCCceeeEeecCCCc
Q FD01845429_023 66 GNRIEIEIAHTGHRSVNGGMEPPHMKVKTKDANNK 100 (117)
Q Consensus 66 gnri~ieia~tghks~~gg~epphikvk~kdannk 100 (117)
+..+.|.|...|-++ ...+.-|+|.|.++|++..
T Consensus 13 ~t~lsi~Iekiglkd-a~~~~~P~i~VSV~D~~G~ 46 (152)
T 2QZQ_A 13 MTLLTLTIEKIGLKD-AGQCIDPYITVSVKDLNGI 46 (152)
T ss_dssp CCEEEEEEEEEECTT-GGGCEEEEEEEEEECTTSC
T ss_pred ceeEEEEEEEeecCC-HhhccCCEEEEEEECCCCC
No 5
>3GM5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, ISOMERASE; HET: CIT, SO4; 2.0A {Thermoanaerobacter tengcongensis} SCOP: d.32.1.0, l.1.1.1
Probab=38.01 E-value=1.5e+02 Score=18.10 Aligned_cols=43 Identities=19% Similarity=0.121 Sum_probs=0.0 Template_Neff=12.300
Q ss_pred cchHHHHHHhhhheeEEEEEeeeccCCCeEEeeccEecCCCEEEE
Q FD01845429_023 27 SDFRYVSNYLISKYKASLRVTKVDAYGNKYRFFDGKDINGNRIEI 71 (117)
Q Consensus 27 ~df~yvs~y~iskyka~lr~~~~d~~gn~~~~fdgvd~~gnri~i 71 (117)
.|++.....+.++ .+.+........+ ...+|...|..|+.|++
T Consensus 113 ~d~~~~~~~l~~~-g~~~~~~~~~~~~-~~~~~~~~dp~G~~ie~ 155 (159)
T 3GM5_A 113 KDMDRKVEELYRK-GMKVIQKGDFEGG-RYAYIDTLRALKVMIEL 155 (159)
T ss_dssp SCHHHHHHHHHHT-TCCEEEEEEETTE-EEEEESCHHHHSSEEEE
T ss_pred CcHHHHHHHHHHC-CCceeEEEeeCCC-eEEEEEcccccceEEEE
No 6
>3RMU_A Methylmalonyl-CoA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondria, ISOMERASE; HET: EDO, PG4; 1.8A {Homo sapiens} SCOP: l.1.1.1, d.32.1.0
Probab=36.39 E-value=1.4e+02 Score=17.25 Aligned_cols=45 Identities=27% Similarity=0.276 Sum_probs=0.0 Template_Neff=12.700
Q ss_pred cchHHHHHHhhhheeEEEE-EeeeccCCCeEEeeccEecCCCEEEE
Q FD01845429_023 27 SDFRYVSNYLISKYKASLR-VTKVDAYGNKYRFFDGKDINGNRIEI 71 (117)
Q Consensus 27 ~df~yvs~y~iskyka~lr-~~~~d~~gn~~~~fdgvd~~gnri~i 71 (117)
+|++-....+.++=-.... .......|....++.-.|..|+.++|
T Consensus 86 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~dp~G~~~~l 131 (134)
T 3RMU_A 86 DNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVEL 131 (134)
T ss_dssp SCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEE
T ss_pred CCHHHHHHHHHHCCceecccccccCCCCCeEEEEcccccCceEEEE
No 7
>6QLZ_A E3 ubiquitin-protein ligase MYLIP; E3 LIGASE CHOLESTEROL METABOLISM LDLR degradation, LIGASE; 2.343A {Homo sapiens}
Probab=33.57 E-value=1.1e+02 Score=16.80 Aligned_cols=21 Identities=19% Similarity=0.474 Sum_probs=0.0 Template_Neff=12.500
Q ss_pred EeeccEecCCCEEEEEEeecC
Q FD01845429_023 57 RFFDGKDINGNRIEIEIAHTG 77 (117)
Q Consensus 57 ~~fdgvd~~gnri~ieia~tg 77 (117)
.+|...|.+|..+.+.|..+|
T Consensus 6 ~~~~~~~~~~~~~~l~i~~~g 26 (101)
T 6QLZ_A 6 EWHSVRDSEGQKLLIGVGPEG 26 (101)
T ss_dssp EEEEEECSSCCEEEEEECSSE
T ss_pred EEEEEECCCCCEEEEEEcCCe
No 8
>PF19670.3 ; DUF6173 ; Family of unknown function (DUF6173)
Probab=33.09 E-value=1.7e+02 Score=21.00 Aligned_cols=30 Identities=27% Similarity=0.360 Sum_probs=0.0 Template_Neff=6.700
Q ss_pred EEEEEeeeccCCCeEEeeccEecCCCEEEE
Q FD01845429_023 42 ASLRVTKVDAYGNKYRFFDGKDINGNRIEI 71 (117)
Q Consensus 42 a~lr~~~~d~~gn~~~~fdgvd~~gnri~i 71 (117)
.++++...-..+...-.|.|.|.+|+.+++
T Consensus 44 ~~~~v~~I~~~~p~lI~f~G~~~~G~~~~l 73 (102)
T A0A3M8DNU3_9BA 44 ITVNITGIGHVGTNLIKFIGFLDNGNPVEL 73 (102)
T ss_pred eEEEEEEEEeccCCEEEEEEEcCCCCeEEE
No 9
>3BQX_A Glyoxalase-related enzyme; VOC superfamily, glyoxalase, Fulvimarina pelagi, PSI-2, Structural Genomics, Protein Structure Initiative, New York SGX Research Center; HET: MSE; 1.4A {Fulvimarina pelagi}
Probab=31.89 E-value=2.2e+02 Score=18.05 Aligned_cols=64 Identities=14% Similarity=0.050 Sum_probs=0.0 Template_Neff=11.400
Q ss_pred cccchHHHHHHhhhheeEEEEEeeeccCCCeEEeeccEecCCCEEEEEEeecCccccCCCCCCCce
Q FD01845429_023 25 NRSDFRYVSNYLISKYKASLRVTKVDAYGNKYRFFDGKDINGNRIEIEIAHTGHRSVNGGMEPPHM 90 (117)
Q Consensus 25 nr~df~yvs~y~iskyka~lr~~~~d~~gn~~~~fdgvd~~gnri~ieia~tghks~~gg~epphi 90 (117)
+..|.+-+...+.+.--..+........|- +++-=.|..|+.|++.-....-.+..+++-++..
T Consensus 79 ~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~--~~~~~~dp~G~~~~~~~~~~~~~~~~~~~~~~~~ 142 (150)
T 3BQX_A 79 AETEVAPLMERLVAAGGQLLRPADAPPHGG--LRGYVADPDGHIWEIAFNPVWPIGADGSVTFAAK 142 (150)
T ss_dssp SGGGHHHHHHHHHHTTCEEEEEEECCTTSS--EEEEEECTTCCEEEEEECTTSCEETTEEECCCC-
T ss_pred CHHHHHHHHHHHHHCCCeEecCCCCCCCCc--EEEEEECCCCCEEEEEeCCCCCCCCCCCeecccc
No 10
>2W4Y_A CAULOBACTER 5 VIRUS-LIKE PARTICLE; VIRUS, ASSEMBLY, CALCIUM ION, RNA; HET: AMP; 2.9A {UNCLASSIFIED LEVIVIRUS}
Probab=28.70 E-value=2.6e+02 Score=20.51 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=0.0 Template_Neff=7.000
Q ss_pred EEEEeeeccCCCeEEeeccEecCCCEEEEEEeecCccccCCC
Q FD01845429_023 43 SLRVTKVDAYGNKYRFFDGKDINGNRIEIEIAHTGHRSVNGG 84 (117)
Q Consensus 43 ~lr~~~~d~~gn~~~~fdgvd~~gnri~ieia~tghks~~gg 84 (117)
+|...+.|.++..|..=++ +....+.|.|+=-++..||
T Consensus 19 ~l~ri~~~~~~S~Y~~~~~----~~~~~l~I~Hs~~k~~~~~ 56 (122)
T 2W4Y_A 19 VLRKINQDGYTSEYYLPET----SSSFRAKVRHTKESVKPNQ 56 (122)
T ss_dssp EEEEEEECSSEEEEEEECS----SEEEEEEEEEEECCCCTTS
T ss_pred eeeeeecCCCceEEEcCCC----CccEEEEEEecCCCCCCCC
No 11
>PF02983.18 ; Pro_Al_protease ; Alpha-lytic protease prodomain
Probab=27.35 E-value=1.1e+02 Score=19.17 Aligned_cols=16 Identities=19% Similarity=0.171 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred cEecCCCEEEEEEeec
Q FD01845429_023 61 GKDINGNRIEIEIAHT 76 (117)
Q Consensus 61 gvd~~gnri~ieia~t 76 (117)
++|...|+|+|++..+
T Consensus 25 ~vD~~~N~VvV~v~~~ 40 (56)
T K0JT82_SACES/1 25 QTDPAANAVVVKHAPG 40 (56)
T ss_pred EEeCCCCEEEEEeCCC
No 12
>PF11433.12 ; DUF3198 ; Protein of unknown function (DUF3198)
Probab=25.42 E-value=73 Score=21.24 Aligned_cols=21 Identities=29% Similarity=0.437 Sum_probs=0.0 Template_Neff=4.800
Q ss_pred HHHhhcccchHHHHHHhhhhe
Q FD01845429_023 20 ARLLKNRSDFRYVSNYLISKY 40 (117)
Q Consensus 20 arllknr~df~yvs~y~isky 40 (117)
|.++||..+..|+|..|.++|
T Consensus 16 a~Fvkn~~elE~la~~Lp~kY 36 (49)
T T0MV94_9ARCH/7 16 ATFVKNERDLDIISRKLGPSF 36 (49)
T ss_pred HHHHHcHHHHHHHHHHhCHHH
No 13
>PF20442.2 ; BrxL_N ; BREX system Lon protease-like protein BrxL N-terminal
Probab=24.96 E-value=1.3e+02 Score=22.37 Aligned_cols=25 Identities=32% Similarity=0.437 Sum_probs=0.0 Template_Neff=6.900
Q ss_pred CcHHHHHhhcccchHHHHHHhhhhe
Q FD01845429_023 16 KDYTARLLKNRSDFRYVSNYLISKY 40 (117)
Q Consensus 16 ~~~~arllknr~df~yvs~y~isky 40 (117)
++...++...++=-+||+.||+++|
T Consensus 10 K~l~~~~~~~~~lP~yV~E~Ll~~y 34 (132)
T A6Q303_NITSB/9 10 KDLTKLIKEGANVPIYVLEYLLGMY 34 (132)
T ss_pred ccHHHHHhcccCCcHHHHHHHHHhh
No 14
>2BUZ_A PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN; OXIDOREDUCTASE, DIOXYGENASE, AROMATIC DEGRADATION, NON-HEME IRON, BETA- SANDWICH, MIXED ALPHA/BETA STRUCTURE OXIDOREDUCTASE; HET: 4NC; 1.8A {ACINETOBACTER CALCOACETICUS} SCOP: b.3.6.1
Probab=23.60 E-value=2.5e+02 Score=21.38 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=0.0 Template_Neff=8.400
Q ss_pred EEEEEeeeccCCCeEEeecc----------------Ee-cCCCEEEEEEeecCccccCCCCCCCceeeEeecCCCceecH
Q FD01845429_023 42 ASLRVTKVDAYGNKYRFFDG----------------KD-INGNRIEIEIAHTGHRSVNGGMEPPHMKVKTKDANNKTTNI 104 (117)
Q Consensus 42 a~lr~~~~d~~gn~~~~fdg----------------vd-~~gnri~ieia~tghks~~gg~epphikvk~kdannk~~~~ 104 (117)
|.+.+-.+|..|.-...-+. .| .+|.---..|.-....+..|...||||-+++..........
T Consensus 70 a~V~iw~~d~~G~Y~~~~~~~~~~~~~~~~~~g~~~Td~~~G~~~f~ti~Pg~y~~~~g~~r~~hih~~v~~~g~~~~l~ 149 (209)
T 2BUZ_A 70 VLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVPGRKGSTQAPHISLIIFAHGINIGLH 149 (209)
T ss_dssp CEEEEECCCTTSCCSSTTCCSCCCCCTTCCCEEEEECCTTTCCEEEEEECCCCCBCGGGCBCCCCEEEEEECTTCSSCEE
T ss_pred EEEEEEeCCCCCCCCCccCCCCCccCCCeeEEEEEcCCCCCCeEEEEeCCCCcccCCCCCccCCEEEEEEEcCCeeeeEE
Q ss_pred HHhhhHhh
Q FD01845429_023 105 DKYFLEED 112 (117)
Q Consensus 105 ~kyfleed 112 (117)
...|+++|
T Consensus 150 tq~~f~~d 157 (209)
T 2BUZ_A 150 TRVYFDDE 157 (209)
T ss_dssp EEEEETTC
T ss_pred EEEEeCCc
No 15
>PF15613.10 ; WSD ; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
Probab=23.07 E-value=2.4e+02 Score=17.11 Aligned_cols=21 Identities=19% Similarity=0.452 Sum_probs=0.0 Template_Neff=9.100
Q ss_pred eccCCCeEEe-eccEecCCCEEEEE
Q FD01845429_023 49 VDAYGNKYRF-FDGKDINGNRIEIE 72 (117)
Q Consensus 49 ~d~~gn~~~~-fdgvd~~gnri~ie 72 (117)
.|.+||.|.+ |++ ...+|-+|
T Consensus 8 ~Dr~~~~Yw~~~~~---~~~~l~v~ 29 (69)
T A4S078_OSTLU/8 8 MDRHLATYWWNFGG---RKDAVYVQ 29 (69)
T ss_pred EeCCCCeEEEecCC---CCCeEEEE
No 16
>PF06887.18 ; DUF1265 ; Protein of unknown function (DUF1265)
Probab=22.59 E-value=1e+02 Score=21.05 Aligned_cols=24 Identities=38% Similarity=0.573 Sum_probs=0.0 Template_Neff=3.200
Q ss_pred HhhcccchHHHHHHhhhheeEEEE
Q FD01845429_023 22 LLKNRSDFRYVSNYLISKYKASLR 45 (117)
Q Consensus 22 llknr~df~yvs~y~iskyka~lr 45 (117)
|.||..|+-||-+-++-.--+.++
T Consensus 3 L~~n~Edl~yV~~~liia~d~~f~ 26 (46)
T A0A8R1I4Y9_CAE 3 LVKNHENFMYVCNMLLIAEDAPFV 26 (46)
T ss_pred HhhcccCHHHHHHHHHHhcccccc
No 17
>6WFI_A Methylmalonyl-CoA epimerase; Epimerase, acid-base, enol, enolate, isomerase; HET: SO4, KFV; 1.37A {Streptomyces coelicolor} SCOP: d.32.1.0
Probab=21.95 E-value=2.7e+02 Score=17.42 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=0.0 Template_Neff=11.500
Q ss_pred CCCeEEeeccEecCCCEEEEEEeecCccc
Q FD01845429_023 52 YGNKYRFFDGKDINGNRIEIEIAHTGHRS 80 (117)
Q Consensus 52 ~gn~~~~fdgvd~~gnri~ieia~tghks 80 (117)
.|....||...|..|+.++|--......+
T Consensus 116 ~~~~~~~~~~~dp~G~~~el~~~~~~~~~ 144 (146)
T 6WFI_A 116 MGSRITFLHPKDCHGVLTELVTSAAVESP 144 (146)
T ss_dssp GGCEEEEECGGGTTTCCEEEEECSSCCCC
T ss_pred CccEEEEECcccCCeeEEEEEecCccCCC
No 18
>PF04229.18 ; GrpB ; GrpB protein
Probab=21.41 E-value=2.9e+02 Score=19.56 Aligned_cols=31 Identities=29% Similarity=0.348 Sum_probs=0.0 Template_Neff=9.200
Q ss_pred ecCCCEEEEEEeecCccccCCCCCCCceeeEe
Q FD01845429_023 63 DINGNRIEIEIAHTGHRSVNGGMEPPHMKVKT 94 (117)
Q Consensus 63 d~~gnri~ieia~tghks~~gg~epphikvk~ 94 (117)
.+ |+.+.++|.|.|-.|+.|=.-.|-|-|.+
T Consensus 21 ~~-~~~~~~~i~HiGSTav~gl~akp~iDi~v 51 (161)
T I7EVS4_PHAIB/4 21 DS-GVDGLIEVHHIGSTAVPGLPAKPIIDLIP 51 (161)
T ss_pred cc-CccceeEEeecccCCCCCCCCCceEEEEe
No 19
>5ZE8_A cytochrome c552; cytochrome c, multiheme, purple sulfur bacteria, PHOTOSYNTHESIS; HET: HEC; 1.6A {Thermochromatium tepidum}
Probab=21.31 E-value=4.4e+02 Score=21.55 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=0.0 Template_Neff=9.700
Q ss_pred CC--EEEEEEee-cCccccCCCCCC-CceeeEeecCCCcee
Q FD01845429_023 66 GN--RIEIEIAH-TGHRSVNGGMEP-PHMKVKTKDANNKTT 102 (117)
Q Consensus 66 gn--ri~ieia~-tghks~~gg~ep-phikvk~kdannk~~ 102 (117)
|+ .++++|.+ +||.-..|-..- --++|..+|++.++.
T Consensus 295 ~~~~~~~v~v~N~~GH~~Ptg~~~r~~~l~v~~~d~~g~~v 335 (435)
T 5ZE8_A 295 KEKIAAQVWIRNLQPHAMPTGAPFRNLYLKLTAYDASGEVL 335 (435)
T ss_dssp TTEEEEEEEEEECSSSCBTCSSTTCEEEEEEEEECTTSCEE
T ss_pred CCeEEEEEEEEeCCCCCCCCCCccceEEEEEEEECCCCCEE
No 20
>5F6Q_A Metallothiol transferase FosB 2; alpha-beta fold, Transferase, PSI-Biology, Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID; HET: SO4, GOL; 1.52A {Bacillus anthracis} SCOP: l.1.1.1, d.32.1.0
Probab=21.18 E-value=1.9e+02 Score=17.84 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=0.0 Template_Neff=11.700
Q ss_pred EEeeccEecCCCEEEEEEeecCccccCCCCCCCce
Q FD01845429_023 56 YRFFDGKDINGNRIEIEIAHTGHRSVNGGMEPPHM 90 (117)
Q Consensus 56 ~~~fdgvd~~gnri~ieia~tghks~~gg~epphi 90 (117)
.+.+.-.|..|+.++|.-..........+..++|+
T Consensus 104 ~~~~~~~dp~G~~~~~~~~~~~~~~~~~~~~~~~~ 138 (142)
T 5F6Q_A 104 QRSLYFTDPDGHKFEFHTGTLQNRLEYYKEDKKHM 138 (142)
T ss_dssp CCEEEEECTTCCEEEEECCCHHHHHHHHHHHCCSC
T ss_pred eEEEEEECCCCCEEEEEecccchhhHHhHhhcccc
No 21
>1X9B_A hypothetical membrane protein ta0354_69_121; alpha protein, structural genomics, protein structure initiative, PSI, Northeast Structural Genomics Consortium, NESG, Ontario Center for; NMR {Thermoplasma acidophilum} SCOP: a.10.2.1
Probab=20.38 E-value=1e+02 Score=20.83 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=0.0 Template_Neff=4.800
Q ss_pred HHHhhcccchHHHHHHhhhhe
Q FD01845429_023 20 ARLLKNRSDFRYVSNYLISKY 40 (117)
Q Consensus 20 arllknr~df~yvs~y~isky 40 (117)
|.++||..+..|+|..|.++|
T Consensus 19 a~FvKn~~elE~la~~Lp~kY 39 (53)
T 1X9B_A 19 SVFVRNLNELEALAVRLGKSY 39 (53)
T ss_dssp HHHHHHHHHHHHHHHHHCSHH
T ss_pred HHHHHcHHHHHHHHHHhCHHH