Query HBA9130488.1 hypothetical protein [Escherichia coli]
Match_columns 86
No_of_seqs 13 out of 16
Neff 2.68471
Searched_HMMs 86581
Date Tue Feb 27 18:49:10 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/2714605.hhr -oa3m ../results/2714605.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF08955.14 ; BofC_C ; BofC C-t 89.6 1 1.2E-05 27.5 3.1 28 4-33 49-76 (76)
2 2BW2_A BYPASS OF FORESPORE C; 76.6 5.7 6.6E-05 27.6 2.8 30 4-35 110-139 (140)
3 PF13101.10 ; DUF3945 ; Protein 70.8 7.8 9E-05 23.2 2.0 18 4-21 28-45 (48)
4 7XT1_A Protein BofC; sporulati 67.8 11 0.00013 27.9 2.7 29 4-34 141-169 (173)
5 3ZIE_D SEPF-LIKE PROTEIN; CELL 66.5 24 0.00028 22.8 3.8 31 4-34 15-51 (86)
6 PF17420.6 ; GP17 ; Superinfect 64.3 9.7 0.00011 27.9 1.8 16 16-31 18-33 (100)
7 3ZIH_A CELL DIVISION PROTEIN S 63.4 26 0.0003 23.5 3.6 28 4-31 20-51 (95)
8 1MWQ_A HYPOTHETICAL PROTEIN HI 63.2 13 0.00015 23.0 2.0 20 16-35 66-85 (101)
9 PF20907.1 ; Flav_NS3-hel_C ; F 62.3 14 0.00016 27.3 2.4 36 22-66 16-51 (143)
10 6SCQ_A Cell division protein S 60.7 33 0.00038 21.9 3.6 28 4-31 19-50 (74)
11 6SAT_A Cell division protein S 59.8 33 0.00038 22.7 3.5 28 4-31 19-50 (90)
12 3ZIG_A SEPF-LIKE PROTEIN; CELL 57.7 38 0.00044 22.0 3.6 28 4-31 20-53 (86)
13 4LBH_A 5-chloro-2-hydroxyhydro 57.0 24 0.00027 21.9 2.4 20 16-35 60-79 (100)
14 PF04472.16 ; SepF ; Cell divis 53.9 53 0.00061 20.6 3.6 28 4-31 13-44 (72)
15 1MLI_J MUCONOLACTONE ISOMERASE 53.6 24 0.00027 22.0 2.0 17 16-32 56-72 (96)
16 PF02426.20 ; MIase ; Muconolac 53.4 26 0.0003 20.2 2.0 17 16-32 56-72 (90)
17 6U08_D DddI; type VI secretion 52.5 33 0.00038 22.5 2.7 20 12-31 6-25 (123)
18 PF01474.20 ; DAHP_synth_2 ; Cl 51.7 26 0.0003 30.4 2.6 57 14-76 70-139 (438)
19 5HUD_C 3-Deoxy-D-arabino-heptu 48.7 19 0.00023 31.6 1.5 57 14-76 102-168 (472)
20 3ZNU_A 5-CHLOROMUCONOLACTONE D 46.0 38 0.00044 20.0 2.0 17 16-32 56-72 (94)
21 5UXM_A Phospho-2-dehydro-3-deo 42.9 25 0.00029 30.6 1.2 57 14-76 79-148 (453)
22 6PBJ_A Phospho-2-dehydro-3-deo 42.8 25 0.00029 30.9 1.3 57 14-76 94-160 (464)
23 PF03795.18 ; YCII ; YCII-relat 42.4 48 0.00055 19.4 2.0 20 16-35 56-75 (88)
24 5JI4_A W37; drug design, disul 40.9 56 0.00065 20.5 2.2 16 12-27 8-23 (37)
25 3PH0_C AscG; Type III secretio 39.6 42 0.00048 20.8 1.6 16 21-36 22-37 (61)
26 PF09413.14 ; DUF2007 ; Putativ 38.6 35 0.0004 18.8 1.0 16 16-31 49-64 (65)
27 PF03833.17 ; PolC_DP2 ; DNA po 37.8 41 0.00047 32.1 1.9 25 10-34 399-423 (944)
28 PF11411.12 ; DNA_ligase_IV ; D 36.7 50 0.00058 17.7 1.4 14 20-33 21-34 (34)
29 PF08369.14 ; PCP_red ; Proto-c 35.5 54 0.00063 18.6 1.5 13 22-34 3-15 (45)
30 PF07720.16 ; TPR_3 ; Tetratric 34.5 77 0.00088 16.2 1.9 18 19-36 15-32 (34)
31 1IK9_C DNA LIGASE IV; DNA end 34.0 59 0.00068 17.9 1.5 14 20-33 23-36 (37)
32 5IJL_A DNA polymerase II large 33.0 57 0.00066 31.8 2.0 25 10-34 414-438 (1066)
33 PF20090.3 ; DUF6482 ; Family o 32.9 74 0.00086 21.2 2.0 20 13-32 44-63 (101)
34 6BMC_B Phospho-2-dehydro-3-deo 32.8 60 0.00069 28.3 1.9 57 14-76 72-141 (405)
35 1N0W_B Breast cancer type 2 su 32.2 65 0.00075 18.3 1.5 19 12-30 12-32 (35)
36 4RWT_D Leiomodin-2; leucine ri 31.7 1.2E+02 0.0014 26.4 3.6 39 20-65 37-75 (506)
37 7Y6C_E EscG/YscG/SsaH family t 31.6 64 0.00074 21.8 1.6 16 21-36 23-38 (88)
38 1CTF_A RIBOSOMAL PROTEIN L7/L1 31.5 73 0.00084 18.3 1.6 13 20-32 33-45 (74)
39 PF11855.12 ; DUF3375 ; Protein 31.4 1E+02 0.0012 26.2 3.0 30 4-34 149-178 (468)
40 PF14430.10 ; Imm1 ; Immunity p 31.3 83 0.00095 22.4 2.2 24 13-36 2-25 (155)
41 6T8H_B DP2 subunit of D-family 31.1 63 0.00073 32.3 2.0 25 10-34 414-438 (1275)
42 3FLD_A Protein traI; NOVEL ALP 31.0 87 0.001 22.9 2.3 23 11-33 103-125 (153)
43 PF07057.15 ; TraI_C ; DNA heli 31.0 90 0.001 23.3 2.4 23 11-33 115-137 (161)
44 PF04981.17 ; NMD3 ; NMD3 famil 30.7 30 0.00035 25.7 -0.1 25 7-31 171-195 (229)
45 1GL2_C VESICLE TRANSPORT V-SNA 30.6 27 0.00031 19.5 -0.3 30 2-31 34-63 (65)
46 4YTK_A Transcription elongatio 30.4 39 0.00046 23.1 0.5 8 62-69 11-18 (130)
47 PF20099.3 ; DUF6489 ; Family o 29.3 58 0.00067 22.3 1.1 9 20-28 10-18 (80)
48 PF20984.1 ; PT26-6P_helical ; 29.3 71 0.00082 24.6 1.6 30 2-31 5-34 (138)
49 PF16733.9 ; NRho ; Rhomboid N- 29.3 1.2E+02 0.0014 17.7 2.3 20 12-31 36-58 (69)
50 1S7I_A hypothetical protein PA 29.1 1.1E+02 0.0013 19.7 2.3 17 16-32 90-106 (124)
51 2KPQ_A Uncharacterized protein 29.0 1.3E+02 0.0015 20.2 2.7 19 12-30 23-41 (100)
52 6CVQ_B Aprataxin; protein-DNA 26.8 50 0.00058 22.4 0.5 32 4-37 131-175 (180)
53 8IAH_Y Tropomodulin-1; Macroco 26.6 2.3E+02 0.0027 22.3 4.0 41 20-66 23-63 (359)
54 7QV8_D DNA_repair_protein_BRCA 26.5 1.2E+02 0.0014 18.3 1.9 20 12-31 12-33 (35)
55 PF06497.15 ; Baculo_Ac102 ; Ba 25.9 1.5E+02 0.0017 21.5 2.6 31 4-34 54-85 (90)
56 PF01535.24 ; PPR ; PPR repeat 25.0 78 0.0009 10.7 1.6 16 18-33 13-28 (31)
57 5XLP_M Uncharacterized protein 25.0 91 0.001 22.5 1.5 14 19-32 45-58 (78)
58 PF20829.1 ; Acr30-35_AcrF1 ; A 25.0 91 0.001 22.5 1.5 14 19-32 45-58 (78)
59 5ZKM_A SP_0782; protein-DNA co 24.7 99 0.0011 21.8 1.6 19 20-38 60-78 (82)
60 8FKV_NM Protein MAK16 homolog; 24.2 58 0.00067 27.9 0.5 8 63-71 173-180 (300)
61 PF11459.12 ; AbiEi_3 ; Transcr 24.1 88 0.001 22.8 1.3 17 20-36 72-88 (151)
62 PF06169.16 ; DUF982 ; Protein 24.0 1.5E+02 0.0017 18.4 2.2 19 11-30 9-27 (72)
63 5A79_A CAPSID PROTEIN; BSMV, V 23.3 4.5E+02 0.0052 21.2 5.0 55 5-65 41-97 (198)
64 1XQA_B Glyoxalase/Bleomycin re 22.6 1.7E+02 0.002 16.2 2.0 21 16-36 9-29 (113)
65 2HYZ_A SYNTHETIC CONSENSUS TPR 22.6 1.5E+02 0.0018 16.5 1.8 18 19-36 117-134 (136)
66 4MVE_B Uncharacterized protein 22.5 1.7E+02 0.002 21.0 2.5 48 4-75 7-54 (151)
67 4NJC_G Geobacillus stearotherm 21.7 1.4E+02 0.0016 20.8 1.8 17 16-32 32-48 (65)
68 PF05008.19 ; V-SNARE ; Vesicle 21.7 1.2E+02 0.0013 18.3 1.3 11 21-31 35-45 (80)
69 PF02184.20 ; HAT ; HAT (Half-A 21.6 1.7E+02 0.002 14.5 1.8 18 19-36 1-18 (32)
70 PF02495.21 ; TGBp3 ; Triple ge 21.6 65 0.00076 21.0 0.2 26 12-37 32-57 (59)
71 8AS8_E JetA; SMC complexes, ba 21.6 1.9E+02 0.0022 25.6 3.0 30 4-34 217-246 (554)
72 6W1S_F Mediator of RNA polymer 21.5 1.1E+02 0.0013 20.1 1.3 14 21-34 30-43 (76)
73 PF18330.5 ; Lig_C ; Ligase Pab 21.3 2.9E+02 0.0034 20.1 3.4 27 5-31 52-84 (121)
74 PF08485.14 ; Polysacc_syn_2C ; 21.3 1.5E+02 0.0017 15.8 1.5 16 20-35 33-48 (48)
No 1
>PF08955.14 ; BofC_C ; BofC C-terminal domain
Probab=89.61 E-value=1 Score=27.52 Aligned_cols=28 Identities=29% Similarity=0.412 Sum_probs=0.0 Template_Neff=9.000
Q ss_pred hHHHHHHHcCCcEEEccHHHHHHHHHhchh
Q HBA9130488.1 4 RRYIADLRNGKDVIVSDIDEARKLLDFMPE 33 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~sv~EAR~lLD~MpE 33 (86)
....+.|++| +.+.|.+||+.+|+++.+
T Consensus 49 ~~~~~~l~~G--i~~~s~~e~~~~le~~~s 76 (76)
T D5WW86_KYRT2/1 49 KGALDSLRRG--VRVDGREDYASILDTYGE 76 (76)
T ss_pred HHHHHHHHcC--ceeCCHHHHHHHHHhhcC
No 2
>2BW2_A BYPASS OF FORESPORE C; SPORULATION, SIGNALING PROTEIN, BOFC, SIGMAK CHECKPOINT; NMR {BACILLUS SUBTILIS}
Probab=76.57 E-value=5.7 Score=27.55 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=0.0 Template_Neff=8.400
Q ss_pred hHHHHHHHcCCcEEEccHHHHHHHHHhchhhc
Q HBA9130488.1 4 RRYIADLRNGKDVIVSDIDEARKLLDFMPELR 35 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~sv~EAR~lLD~MpELr 35 (86)
....+.|++| +.+.|.+||..+|+.+.+..
T Consensus 110 ~~~~~~L~~G--i~~~s~ee~~~~Le~~~~~~ 139 (140)
T 2BW2_A 110 SHMQKNLLKG--IPFRTKAEFEDVIEHMKTYS 139 (140)
T ss_dssp HHHHHHHHHC--CSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcC--CCCCCHHHHHHHHHhhhhcc
No 3
>PF13101.10 ; DUF3945 ; Protein of unknown function (DUF3945)
Probab=70.76 E-value=7.8 Score=23.24 Aligned_cols=18 Identities=22% Similarity=0.484 Sum_probs=0.0 Template_Neff=7.000
Q ss_pred hHHHHHHHcCCcEEEccH
Q HBA9130488.1 4 RRYIADLRNGKDVIVSDI 21 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~sv 21 (86)
..|.++|++|+.|.+..+
T Consensus 28 ~~Q~~~l~~Gk~v~l~~~ 45 (48)
T F0S6U1_PSESL/2 28 EDQKRDLKDGKAIYLEGL 45 (48)
T ss_pred HHHHHHHHCCCcEEccCc
No 4
>7XT1_A Protein BofC; sporulation, SIGNALING PROTEIN; 1.98A {Bacillus subtilis subsp. subtilis str. 168}
Probab=67.76 E-value=11 Score=27.94 Aligned_cols=29 Identities=14% Similarity=0.235 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred hHHHHHHHcCCcEEEccHHHHHHHHHhchhh
Q HBA9130488.1 4 RRYIADLRNGKDVIVSDIDEARKLLDFMPEL 34 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~sv~EAR~lLD~MpEL 34 (86)
....++|++| +.+.|.+||..+|+++.+.
T Consensus 141 ~~~~~~L~~G--I~~~s~ee~~~~Le~l~~~ 169 (173)
T 7XT1_A 141 SHMQKNLLKG--IPFRTKAEFEDVIEHMKTY 169 (173)
T ss_pred HHHHHHHHcC--CCCCCHHHHHHHHHHhhhh
No 5
>3ZIE_D SEPF-LIKE PROTEIN; CELL CYCLE; HET: MSE; 2.0A {ARCHAEOGLOBUS FULGIDUS}
Probab=66.51 E-value=24 Score=22.78 Aligned_cols=31 Identities=16% Similarity=0.236 Sum_probs=0.0 Template_Neff=8.100
Q ss_pred hHHHHHHHcCCcEEEc------cHHHHHHHHHhchhh
Q HBA9130488.1 4 RRYIADLRNGKDVIVS------DIDEARKLLDFMPEL 34 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~------sv~EAR~lLD~MpEL 34 (86)
++-++.|++|.-|-++ +.++|+.++|.|..+
T Consensus 15 ~~i~~~l~~g~iVivn~~~l~~~~~~~~riidfl~G~ 51 (86)
T 3ZIE_D 15 PEIKREIYDGNIVVADIAFIKHDKLTLDRVLKDLRQL 51 (86)
T ss_dssp HHHHHHHHTTCEEEEECGGGTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEChHHhcCHHHHHHHHHHHHHH
No 6
>PF17420.6 ; GP17 ; Superinfection exclusion gene product 17
Probab=64.26 E-value=9.7 Score=27.93 Aligned_cols=16 Identities=25% Similarity=0.621 Sum_probs=0.0 Template_Neff=3.800
Q ss_pred EEEccHHHHHHHHHhc
Q HBA9130488.1 16 VIVSDIDEARKLLDFM 31 (86)
Q Consensus 16 v~V~sv~EAR~lLD~M 31 (86)
|.|+|++||+.|++.+
T Consensus 18 v~V~s~eea~~l~~~L 33 (100)
T A0MZA8_BPN4/5- 18 VEVDSVEEGVRIIDIL 33 (100)
T ss_pred EECCCHHHHHHHHHHH
No 7
>3ZIH_A CELL DIVISION PROTEIN SEPF; CELL CYCLE; 2.0A {BACILLUS SUBTILIS}
Probab=63.38 E-value=26 Score=23.51 Aligned_cols=28 Identities=29% Similarity=0.657 Sum_probs=0.0 Template_Neff=7.500
Q ss_pred hHHHHHHHcCCcEEEc----cHHHHHHHHHhc
Q HBA9130488.1 4 RRYIADLRNGKDVIVS----DIDEARKLLDFM 31 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~----sv~EAR~lLD~M 31 (86)
+.-++.||+|+-|-++ +.++|+.++|.+
T Consensus 20 ~~i~~~lk~g~~Vilnl~~l~~~~~~RilDfl 51 (95)
T 3ZIH_A 20 QEIADHLKNRRAVVVNLQRIQHDQAKRIVDFL 51 (95)
T ss_dssp HHHHHHHHTTCEEEEECSSSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCeEEEECCCCCHHHHHHHHHHH
No 8
>1MWQ_A HYPOTHETICAL PROTEIN HI0828; HI0828, YCII_HAEIN, hypothetical protein, structural genomics, Structure 2 Function Project, S2F, UNKNOWN FUNCTION; HET: MSE, 1PE; 0.99A {Haemophilus influenzae} SCOP: d.58.4.7
Probab=63.23 E-value=13 Score=22.97 Aligned_cols=20 Identities=10% Similarity=0.157 Sum_probs=0.0 Template_Neff=10.100
Q ss_pred EEEccHHHHHHHHHhchhhc
Q HBA9130488.1 16 VIVSDIDEARKLLDFMPELR 35 (86)
Q Consensus 16 v~V~sv~EAR~lLD~MpELr 35 (86)
+.+.|.+||.++++..|-++
T Consensus 66 ~~a~s~eea~~l~~~~P~~~ 85 (101)
T 1MWQ_A 66 AQFENLQAAKDWAAQDPYVE 85 (101)
T ss_dssp EECSSHHHHHHHHHTCHHHH
T ss_pred EEcCCHHHHHHHHhcCcchh
No 9
>PF20907.1 ; Flav_NS3-hel_C ; Flavivirus NS3 helicase, C-terminal helical domain
Probab=62.30 E-value=14 Score=27.35 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=0.0 Template_Neff=6.300
Q ss_pred HHHHHHHHhchhhcccccCCCCCCCCcccCCCCCCccCCCCCccc
Q HBA9130488.1 22 DEARKLLDFMPELRSHVDNFPANSGYLFKDTPFGDVWKQPRGTYR 66 (86)
Q Consensus 22 ~EAR~lLD~MpELrP~~~~~P~~~G~~~k~~~~~~~~~dP~GTYR 66 (86)
.||+.|||||--+....-.|=.+...- ...++|.||
T Consensus 16 ~EAqmLLDnl~~~~~~~~~f~~~E~~~---------~~~~~G~~r 51 (143)
T POLG_DEN1W/195 16 TEAKMLLDNINTPEGIIPALFEPEREK---------SAAIDGEYR 51 (143)
T ss_pred HHHHHHHHHhcCCCCccccccCccchh---------cCCCCceee
No 10
>6SCQ_A Cell division protein SepF; Cell Division protein, CELL CYCLE; 1.5A {Corynebacterium glutamicum ATCC 13032}
Probab=60.74 E-value=33 Score=21.94 Aligned_cols=28 Identities=29% Similarity=0.561 Sum_probs=0.0 Template_Neff=7.600
Q ss_pred hHHHHHHHcCCcEEEc----cHHHHHHHHHhc
Q HBA9130488.1 4 RRYIADLRNGKDVIVS----DIDEARKLLDFM 31 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~----sv~EAR~lLD~M 31 (86)
++-++.|++|+-|-++ +.++++.++|.+
T Consensus 19 ~~i~~~lk~g~~Vilnl~~l~~~~~~Ri~Dfl 50 (74)
T 6SCQ_A 19 QVIGGAFRDGDAVVFDMSLLSREEARRIVDFA 50 (74)
T ss_dssp HHHHHHHHTTCCEEEECTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
No 11
>6SAT_A Cell division protein SepF; Cell Division protein, CELL CYCLE; 1.6A {Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)}
Probab=59.77 E-value=33 Score=22.75 Aligned_cols=28 Identities=29% Similarity=0.561 Sum_probs=0.0 Template_Neff=7.600
Q ss_pred hHHHHHHHcCCcEEEc----cHHHHHHHHHhc
Q HBA9130488.1 4 RRYIADLRNGKDVIVS----DIDEARKLLDFM 31 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~----sv~EAR~lLD~M 31 (86)
++-++.||+|+-|-++ +.++|+.++|.|
T Consensus 19 ~~i~~~lk~g~~Vivnl~~l~~~~~~Ri~Dfl 50 (90)
T 6SAT_A 19 QVIGGAFRDGDAVVFDMSLLSREEARRIVDFA 50 (90)
T ss_dssp HHHHHHHHTTCEEEEECTTSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEECCCCCHHHHHHHHHHH
No 12
>3ZIG_A SEPF-LIKE PROTEIN; CELL CYCLE; HET: MSE; 2.5A {PYROCOCCUS FURIOSUS COM1}
Probab=57.70 E-value=38 Score=22.02 Aligned_cols=28 Identities=25% Similarity=0.431 Sum_probs=0.0 Template_Neff=7.900
Q ss_pred hHHHHHHHcCCcEEEc------cHHHHHHHHHhc
Q HBA9130488.1 4 RRYIADLRNGKDVIVS------DIDEARKLLDFM 31 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~------sv~EAR~lLD~M 31 (86)
++-++.|++|.-|-++ +.++++.++|.+
T Consensus 20 ~~i~~~l~~g~~Vivnl~~l~~d~~~~~rildfl 53 (86)
T 3ZIG_A 20 KRVSDELKSGNIVIVELTPLEQKPELLKKIAEQL 53 (86)
T ss_dssp HHHHHHHHTTCEEEEECGGGTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECccccCCHHHHHHHHHHH
No 13
>4LBH_A 5-chloro-2-hydroxyhydroquinone dehydrochlorinase (TftG); LYASE; 1.75A {Burkholderia cepacia} SCOP: d.58.4.0
Probab=57.03 E-value=24 Score=21.87 Aligned_cols=20 Identities=15% Similarity=0.210 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred EEEccHHHHHHHHHhchhhc
Q HBA9130488.1 16 VIVSDIDEARKLLDFMPELR 35 (86)
Q Consensus 16 v~V~sv~EAR~lLD~MpELr 35 (86)
+.+.|.+||++++...|-..
T Consensus 60 ~~~~s~~~a~~~~~~~P~~~ 79 (100)
T 4LBH_A 60 MEAESWDEVHSFVENDPFTK 79 (100)
T ss_dssp EECSSHHHHHHHHHTCHHHH
T ss_pred EEcCCHHHHHHHHHcCHhHh
No 14
>PF04472.16 ; SepF ; Cell division protein SepF
Probab=53.91 E-value=53 Score=20.55 Aligned_cols=28 Identities=36% Similarity=0.790 Sum_probs=0.0 Template_Neff=8.100
Q ss_pred hHHHHHHHcCCcEEEc----cHHHHHHHHHhc
Q HBA9130488.1 4 RRYIADLRNGKDVIVS----DIDEARKLLDFM 31 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~----sv~EAR~lLD~M 31 (86)
++-++.||+|.-|-++ +.++++.++|.+
T Consensus 13 ~~i~~~l~~g~~viv~l~~l~~~~~~r~idfl 44 (72)
T F4EZV8_SELS3/1 13 QEIADDLKAGRAVLVNYERVELEEQRRLCDFI 44 (72)
T ss_pred HHHHHHHHCCCeEEEECCCCCHHHHHHHHHHH
No 15
>1MLI_J MUCONOLACTONE ISOMERASE; INTRAMOLECULAR OXIDOREDUCTASE; 3.3A {Pseudomonas putida} SCOP: d.58.4.1
Probab=53.59 E-value=24 Score=21.96 Aligned_cols=17 Identities=18% Similarity=0.272 Sum_probs=0.0 Template_Neff=9.700
Q ss_pred EEEccHHHHHHHHHhch
Q HBA9130488.1 16 VIVSDIDEARKLLDFMP 32 (86)
Q Consensus 16 v~V~sv~EAR~lLD~Mp 32 (86)
+.+.|.+||++++...|
T Consensus 56 ~~~~~~~e~~~~l~~~P 72 (96)
T 1MLI_J 56 FDVPSVEALHDTLMQLP 72 (96)
T ss_pred EEcCCHHHHHHHHhcCC
No 16
>PF02426.20 ; MIase ; Muconolactone delta-isomerase
Probab=53.38 E-value=26 Score=20.18 Aligned_cols=17 Identities=29% Similarity=0.350 Sum_probs=0.0 Template_Neff=11.200
Q ss_pred EEEccHHHHHHHHHhch
Q HBA9130488.1 16 VIVSDIDEARKLLDFMP 32 (86)
Q Consensus 16 v~V~sv~EAR~lLD~Mp 32 (86)
|.+.|.+||++++...|
T Consensus 56 ~~a~~~~ea~~~~~~~P 72 (90)
T A1B186_PARDP/1 56 FDVRDNAELHEILSGLP 72 (90)
T ss_pred EEcCCHHHHHHHHhcCC
No 17
>6U08_D DddI; type VI secretion system, toxin, immunity, deaminase; HET: MSE; 2.491A {Burkholderia cenocepacia}
Probab=52.54 E-value=33 Score=22.48 Aligned_cols=20 Identities=10% Similarity=0.217 Sum_probs=0.0 Template_Neff=9.500
Q ss_pred cCCcEEEccHHHHHHHHHhc
Q HBA9130488.1 12 NGKDVIVSDIDEARKLLDFM 31 (86)
Q Consensus 12 nG~dv~V~sv~EAR~lLD~M 31 (86)
++..+.+.|.+|++++|+.|
T Consensus 6 ~~~~~~~~~~~e~~~~l~~l 25 (123)
T 6U08_D 6 FDGEIEIDEVDSLVEFLSRR 25 (123)
T ss_dssp TTEEEECCSHHHHHHHTTCC
T ss_pred CCCeEEECCHHHHHHHHhcC
No 18
>PF01474.20 ; DAHP_synth_2 ; Class-II DAHP synthetase family
Probab=51.67 E-value=26 Score=30.35 Aligned_cols=57 Identities=23% Similarity=0.375 Sum_probs=0.0 Template_Neff=6.400
Q ss_pred CcEEEccHHHHHHHHHhchhhcccccCCC-CCCCCcccCCCCCCccCCC--------CC----ccccccccCCCCC
Q HBA9130488.1 14 KDVIVSDIDEARKLLDFMPELRSHVDNFP-ANSGYLFKDTPFGDVWKQP--------RG----TYRGDLYNTKDPF 76 (86)
Q Consensus 14 ~dv~V~sv~EAR~lLD~MpELrP~~~~~P-~~~G~~~k~~~~~~~~~dP--------~G----TYRGDLiN~kdP~ 76 (86)
.+.....+..-..+|..|..+-...-..| ...|.+ .--+.-| .| +||||+||...+.
T Consensus 70 ~~~~~~~v~~~~~~l~~ms~~l~~~~~~pVv~igRi------AGQ~aKPRS~~~E~~~g~~lpsyrGd~VN~~~~~ 139 (438)
T E0UU69_SULAO/4 70 SEFHADNIRDTFKAIMQMAVVMTYAGGLPVVKVGRL------GGQFAKPRSSDTETIGDVTLDSYRGDIINGIGFD 139 (438)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhcCCCceecccc------ccCCCCCCCCccceeCCEEEeeecccccccCCCC
No 19
>5HUD_C 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; chorismate mutase, DAHP synthase, shikimate pathway, complex, Transferase/Isomerase, Transferase-Isomerase complex; HET: PEG, TRP, TSA, GOL, PO4, PGE, PG4; 2.15A {Corynebacterium glutamicum} SCOP: c.1.10.8, l.1.1.1
Probab=48.72 E-value=19 Score=31.63 Aligned_cols=57 Identities=21% Similarity=0.281 Sum_probs=0.0 Template_Neff=6.000
Q ss_pred CcEEEccHHHHHHHHHhchhhcccccCCC-CCCCCcccCCCCCCccCCCCC---------ccccccccCCCCC
Q HBA9130488.1 14 KDVIVSDIDEARKLLDFMPELRSHVDNFP-ANSGYLFKDTPFGDVWKQPRG---------TYRGDLYNTKDPF 76 (86)
Q Consensus 14 ~dv~V~sv~EAR~lLD~MpELrP~~~~~P-~~~G~~~k~~~~~~~~~dP~G---------TYRGDLiN~kdP~ 76 (86)
.+.....++.-.++|..|..+--.....| ...|.+ .--+..|.- +||||+||...+.
T Consensus 102 ~d~~~~~i~~k~~~l~~ms~vl~~~~~~pVV~IGRi------AGQyaKPRS~~~E~~~lpsyrGD~VN~~~~~ 168 (472)
T 5HUD_C 102 ESNTEPHIRANVKTLLQMAVVLTYGASTPVIKMARI------AGQYAKPRSSDLDGNGLPNYRGDIVNGVEAT 168 (472)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEC------SSCCCCCCSSSCCSSSCCCCCCTTTCCSSSS
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeec------cccCCCCCCCCccCCCCCcccccccCCCCCC
No 20
>3ZNU_A 5-CHLOROMUCONOLACTONE DEHALOGENASE; LYASE, FERREDOXIN FOLD, ISOMERASE, 3-CHLOROCATECHOL PATHWAY; HET: EDO, CL; 1.65A {RHODOCOCCUS OPACUS} SCOP: d.58.4.0
Probab=46.04 E-value=38 Score=20.01 Aligned_cols=17 Identities=29% Similarity=0.335 Sum_probs=0.0 Template_Neff=10.800
Q ss_pred EEEccHHHHHHHHHhch
Q HBA9130488.1 16 VIVSDIDEARKLLDFMP 32 (86)
Q Consensus 16 v~V~sv~EAR~lLD~Mp 32 (86)
+.+.|.+||++++..-|
T Consensus 56 ~ea~~~~e~~~~~~~~P 72 (94)
T 3ZNU_A 56 FDVNSHDELHEILWSLP 72 (94)
T ss_dssp EECSSHHHHHHHHHTST
T ss_pred EEcCCHHHHHHHHhcCC
No 21
>5UXM_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TRANSFERASE, DAH7PS, 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, shikimate pathway; HET: PEP, PO4, TRP; 1.54A {Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)}
Probab=42.92 E-value=25 Score=30.62 Aligned_cols=57 Identities=23% Similarity=0.365 Sum_probs=0.0 Template_Neff=6.400
Q ss_pred CcEEEccHHHHHHHHHhchhhcccccCCC-CCCCCcccCCCCCCccCCCCC------------ccccccccCCCCC
Q HBA9130488.1 14 KDVIVSDIDEARKLLDFMPELRSHVDNFP-ANSGYLFKDTPFGDVWKQPRG------------TYRGDLYNTKDPF 76 (86)
Q Consensus 14 ~dv~V~sv~EAR~lLD~MpELrP~~~~~P-~~~G~~~k~~~~~~~~~dP~G------------TYRGDLiN~kdP~ 76 (86)
.+.....++.-.++|..|..+--+.-..| ...|.+ .--+..|.- .||||+||..++.
T Consensus 79 ~~~~~~~i~~~~~~l~~ma~~l~~~~~~pVv~igRi------AGQyaKPRS~~~E~~~g~~lpsyrGD~vN~~~~~ 148 (453)
T 5UXM_A 79 AEFSAAKIRDTFKVLLQMAVVMTFAAGCPVVKVGRM------AGQFAKPRSSGDETQNGVTLPAYRGDIVNGIGFD 148 (453)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC------SSCCCCCCSCSEEEETTEEEECCCCTTTCCSSSS
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeec------ccccCCCCCCcceeeCCEEeccccccccccCCCC
No 22
>6PBJ_A Phospho-2-dehydro-3-deoxyheptonate aldolase; DAH7PS, Allostery, shipmate pathway, TIM barrel, TRANSFERASE; HET: PEG, SO4, PO4, PG4; 1.9A {Mycobacterium tuberculosis} SCOP: l.1.1.1, c.1.10.8
Probab=42.84 E-value=25 Score=30.85 Aligned_cols=57 Identities=23% Similarity=0.323 Sum_probs=0.0 Template_Neff=6.100
Q ss_pred CcEEEccHHHHHHHHHhchhhcccccCCC-CCCCCcccCCCCCCccCCCCC---------ccccccccCCCCC
Q HBA9130488.1 14 KDVIVSDIDEARKLLDFMPELRSHVDNFP-ANSGYLFKDTPFGDVWKQPRG---------TYRGDLYNTKDPF 76 (86)
Q Consensus 14 ~dv~V~sv~EAR~lLD~MpELrP~~~~~P-~~~G~~~k~~~~~~~~~dP~G---------TYRGDLiN~kdP~ 76 (86)
.+.....+..-.++|-+|..+--.....| ...|.+ .--+..|.- +||||+||...+.
T Consensus 94 ~~~~~~~i~~~~~~l~~ma~vl~~~~~~pVv~IgRi------AGQ~aKPRS~~~E~~~l~syrGD~VN~~~~~ 160 (464)
T 6PBJ_A 94 MDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARI------AGQYAKPRSADIDALGLRSYRGDMINGFAPD 160 (464)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEC------SSCCCCCCSCSBCTTSSBCCCCTTTSCSSSS
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec------ccccCCCcccccceecccccccccccCCCCC
No 23
>PF03795.18 ; YCII ; YCII-related domain
Probab=42.40 E-value=48 Score=19.43 Aligned_cols=20 Identities=20% Similarity=0.152 Sum_probs=0.0 Template_Neff=10.700
Q ss_pred EEEccHHHHHHHHHhchhhc
Q HBA9130488.1 16 VIVSDIDEARKLLDFMPELR 35 (86)
Q Consensus 16 v~V~sv~EAR~lLD~MpELr 35 (86)
+.+.|.+||++++..-|-.+
T Consensus 56 ~~a~s~eea~~~~~~~P~~~ 75 (88)
T Q9AJZ7_STRCO/1 56 LDLPDPAAARTFAFDEPNYQ 75 (88)
T ss_pred EEcCCHHHHHHHHhhCcchh
No 24
>5JI4_A W37; drug design, disulfide-rich, peptide design, DE NOVO PROTEIN; NMR {synthetic construct}
Probab=40.86 E-value=56 Score=20.51 Aligned_cols=16 Identities=38% Similarity=0.586 Sum_probs=0.0 Template_Neff=1.000
Q ss_pred cCCcEEEccHHHHHHH
Q HBA9130488.1 12 NGKDVIVSDIDEARKL 27 (86)
Q Consensus 12 nG~dv~V~sv~EAR~l 27 (86)
||+..+|+|-+|...|
T Consensus 8 ngetytvssseecerl 23 (37)
T 5JI4_A 8 NGETYTVSSSEECERL 23 (37)
T ss_dssp TTEEEEESSHHHHHHH
T ss_pred CCcEEEecCHHHHHHH
No 25
>3PH0_C AscG; Type III secretion system, chaperones AscE and AscG, CHAPERONE; 2.4A {Aeromonas hydrophila}
Probab=39.61 E-value=42 Score=20.77 Aligned_cols=16 Identities=19% Similarity=0.347 Sum_probs=0.0 Template_Neff=7.500
Q ss_pred HHHHHHHHHhchhhcc
Q HBA9130488.1 21 IDEARKLLDFMPELRS 36 (86)
Q Consensus 21 v~EAR~lLD~MpELrP 36 (86)
.+||+.||+-++.|+|
T Consensus 22 ~~~A~~If~gL~~l~p 37 (61)
T 3PH0_C 22 HQEAASIADWLAQEEC 37 (61)
T ss_dssp HHHHHHHHHHHHTSST
T ss_pred HHHHHHHHHHHHHccC
No 26
>PF09413.14 ; DUF2007 ; Putative prokaryotic signal transducing protein
Probab=38.56 E-value=35 Score=18.81 Aligned_cols=16 Identities=19% Similarity=0.204 Sum_probs=0.0 Template_Neff=10.700
Q ss_pred EEEccHHHHHHHHHhc
Q HBA9130488.1 16 VIVSDIDEARKLLDFM 31 (86)
Q Consensus 16 v~V~sv~EAR~lLD~M 31 (86)
|.-.+.++|++||+.+
T Consensus 49 V~~~~~~~A~~ll~~~ 64 (65)
T Q8A1E5_BACTN/8 49 VTEDQYEAATELIRSR 64 (65)
T ss_pred EeHHHHHHHHHHHHhc
No 27
>PF03833.17 ; PolC_DP2 ; DNA polymerase II large subunit DP2
Probab=37.80 E-value=41 Score=32.08 Aligned_cols=25 Identities=36% Similarity=0.445 Sum_probs=0.0 Template_Neff=6.400
Q ss_pred HHcCCcEEEccHHHHHHHHHhchhh
Q HBA9130488.1 10 LRNGKDVIVSDIDEARKLLDFMPEL 34 (86)
Q Consensus 10 LRnG~dv~V~sv~EAR~lLD~MpEL 34 (86)
|+||.-|.|.|+++|+++.+...++
T Consensus 399 L~dG~v~ri~s~~~a~~i~~~I~~I 423 (944)
T DP2L_PYRFU/9-9 399 LKDGSVVRVDDYNLALKIRDEVEEI 423 (944)
T ss_pred cCCCCEEEeCCHHHHHhhhhchhhH
No 28
>PF11411.12 ; DNA_ligase_IV ; DNA ligase IV
Probab=36.73 E-value=50 Score=17.74 Aligned_cols=14 Identities=14% Similarity=0.363 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred cHHHHHHHHHhchh
Q HBA9130488.1 20 DIDEARKLLDFMPE 33 (86)
Q Consensus 20 sv~EAR~lLD~MpE 33 (86)
++++.+++|..|++
T Consensus 21 ~~~~L~~~l~~~~~ 34 (34)
T I3K1S4_ORENI/7 21 DEQQLREVFNRISS 34 (34)
T ss_pred CHHHHHHHHHhcCC
No 29
>PF08369.14 ; PCP_red ; Proto-chlorophyllide reductase 57 kD subunit
Probab=35.47 E-value=54 Score=18.58 Aligned_cols=13 Identities=23% Similarity=0.286 Sum_probs=0.0 Template_Neff=8.200
Q ss_pred HHHHHHHHhchhh
Q HBA9130488.1 22 DEARKLLDFMPEL 34 (86)
Q Consensus 22 ~EAR~lLD~MpEL 34 (86)
+||++.|+.+|.+
T Consensus 3 ~eA~~~l~~~P~~ 15 (45)
T W0AFM0_9SPHN/4 3 ADAQRELLKIPFF 15 (45)
T ss_pred HHHHHHHHcCCHH
No 30
>PF07720.16 ; TPR_3 ; Tetratricopeptide repeat
Probab=34.45 E-value=77 Score=16.16 Aligned_cols=18 Identities=28% Similarity=0.420 Sum_probs=0.0 Template_Neff=9.200
Q ss_pred ccHHHHHHHHHhchhhcc
Q HBA9130488.1 19 SDIDEARKLLDFMPELRS 36 (86)
Q Consensus 19 ~sv~EAR~lLD~MpELrP 36 (86)
...++|+.+|..+-.+.|
T Consensus 15 g~~~~A~~~f~~l~~~~p 32 (34)
T Q1K7J7_NEUCR/3 15 KNYDEAAELYAQAAEMQA 32 (34)
T ss_pred CCHHHHHHHHHHHHHHcC
No 31
>1IK9_C DNA LIGASE IV; DNA end joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil, GENE REGULATION-LIGASE COMPLEX; 2.3A {Homo sapiens}
Probab=33.99 E-value=59 Score=17.94 Aligned_cols=14 Identities=7% Similarity=0.382 Sum_probs=0.0 Template_Neff=7.800
Q ss_pred cHHHHHHHHHhchh
Q HBA9130488.1 20 DIDEARKLLDFMPE 33 (86)
Q Consensus 20 sv~EAR~lLD~MpE 33 (86)
++++.+.+|..|++
T Consensus 23 t~~~L~~~l~~~~~ 36 (37)
T 1IK9_C 23 DLNQLKEVFSGIKN 36 (37)
T ss_dssp CHHHHHHHHHTCC-
T ss_pred CHHHHHHHHhcCcC
No 32
>5IJL_A DNA polymerase II large subunit; DNA polymerase D-family, transferase; 2.19A {Pyrococcus abyssi (strain GE5 / Orsay)}
Probab=32.95 E-value=57 Score=31.81 Aligned_cols=25 Identities=28% Similarity=0.376 Sum_probs=0.0 Template_Neff=6.000
Q ss_pred HHcCCcEEEccHHHHHHHHHhchhh
Q HBA9130488.1 10 LRNGKDVIVSDIDEARKLLDFMPEL 34 (86)
Q Consensus 10 LRnG~dv~V~sv~EAR~lLD~MpEL 34 (86)
|+||.-|.|+|++||+++-+...++
T Consensus 414 L~dG~v~rv~~~~~a~~~~~~I~~I 438 (1066)
T 5IJL_A 414 LKDGSVLRVDDYNLALKVREDVEEI 438 (1066)
T ss_dssp ETTSCEEECCSHHHHHHHGGGEEEE
T ss_pred cCCCCEEEeCCHHHHHHhhhchhhH
No 33
>PF20090.3 ; DUF6482 ; Family of unknown function (DUF6482)
Probab=32.87 E-value=74 Score=21.19 Aligned_cols=20 Identities=10% Similarity=0.272 Sum_probs=0.0 Template_Neff=8.100
Q ss_pred CCcEEEccHHHHHHHHHhch
Q HBA9130488.1 13 GKDVIVSDIDEARKLLDFMP 32 (86)
Q Consensus 13 G~dv~V~sv~EAR~lLD~Mp 32 (86)
|+.+.-+|+++||+.|..++
T Consensus 44 g~~~~f~Sl~~a~~~L~~~g 63 (101)
T A0A437Q8N7_9GA 44 EKPLRFHNMIQIKELMETLK 63 (101)
T ss_pred CEEEEeCCHHHHHHHHccCC
No 34
>6BMC_B Phospho-2-dehydro-3-deoxyheptonate aldolase; TRANSFERASE, DAH7PS, 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, shikimate pathway, pyocyanin biosynthesis; HET: PEP; 2.7A {Pseudomonas aeruginosa}
Probab=32.84 E-value=60 Score=28.25 Aligned_cols=57 Identities=19% Similarity=0.436 Sum_probs=0.0 Template_Neff=6.000
Q ss_pred CcEEEccHHHHHHHHHhchhhcccccCCC-CCCCCcccCCCCCCccCCCCC------------ccccccccCCCCC
Q HBA9130488.1 14 KDVIVSDIDEARKLLDFMPELRSHVDNFP-ANSGYLFKDTPFGDVWKQPRG------------TYRGDLYNTKDPF 76 (86)
Q Consensus 14 ~dv~V~sv~EAR~lLD~MpELrP~~~~~P-~~~G~~~k~~~~~~~~~dP~G------------TYRGDLiN~kdP~ 76 (86)
.+.....+..-.++|..|..+--+....| ...|.+ .--+..|.- .||||+||...+.
T Consensus 72 ~~~~~~~i~~~~~~l~~~a~~l~~~~~~pVv~IgRi------AGq~aKPRS~~~e~~~g~~lpsyrGd~vN~~~~~ 141 (405)
T 6BMC_B 72 DDHHAENVARKAAVLELLAGALRLAGRRPVIRVGRI------AGQYAKPRSKPHEQVGEQTLPVYRGDMVNGREAH 141 (405)
T ss_dssp TCCSHHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEC------SSCCCCCCSSSBCC--CCCCBCCCCTTTSCSSSS
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEccc------ccccCCCCCCCcceeCCeecccccccCCCCcccC
No 35
>1N0W_B Breast cancer type 2 susceptibility protein; DNA repair, homologous recombination, breast cancer susceptibility, RecA-like ATPase, protein complex, GENE REGULATION-ANTITUMOR PROTEIN COMPLEX; HET: MSE, EDO; 1.7A {Homo sapiens} SCOP: j.97.1.1
Probab=32.22 E-value=65 Score=18.34 Aligned_cols=19 Identities=32% Similarity=0.541 Sum_probs=0.0 Template_Neff=6.600
Q ss_pred cCCcEEEccH--HHHHHHHHh
Q HBA9130488.1 12 NGKDVIVSDI--DEARKLLDF 30 (86)
Q Consensus 12 nG~dv~V~sv--~EAR~lLD~ 30 (86)
+|+.|.|+.. ..|+.||+.
T Consensus 12 ~gk~v~vs~~al~kak~~f~e 32 (35)
T 1N0W_B 12 SGKKVKIAKESLDKVKNLFDE 32 (35)
T ss_dssp TSCBCCCCHHHHHHTTTTTCC
T ss_pred CCCCCccCHHHHHHHHHHhhh
No 36
>4RWT_D Leiomodin-2; leucine rich region, actin nucleation, actin, STRUCTURAL PROTEIN; HET: ANP; 2.98A {Drosophila melanogaster}
Probab=31.68 E-value=1.2e+02 Score=26.41 Aligned_cols=39 Identities=21% Similarity=0.329 Sum_probs=0.0 Template_Neff=7.400
Q ss_pred cHHHHHHHHHhchhhcccccCCCCCCCCcccCCCCCCccCCCCCcc
Q HBA9130488.1 20 DIDEARKLLDFMPELRSHVDNFPANSGYLFKDTPFGDVWKQPRGTY 65 (86)
Q Consensus 20 sv~EAR~lLD~MpELrP~~~~~P~~~G~~~k~~~~~~~~~dP~GTY 65 (86)
|.+|..+|-..|-++-|- +.+|.+...- +..-+.|-|+|
T Consensus 37 s~eel~~l~~el~~~dpd-~~lp~~~rq~------dqt~k~ptg~~ 75 (506)
T 4RWT_D 37 SAEELKELERELEDIEPD-RNLPVGLRQK------SLTEKTPTGTF 75 (506)
T ss_dssp ----------------------------------------------
T ss_pred CHHHHHHHHHHHHhcCCc-CCCCcccccc------CCCCCCCCCCC
No 37
>7Y6C_E EscG/YscG/SsaH family type III secretion system needle protein co-chaperone; EscE, EsaH, EsaG, type III secretion system, CHAPERONE; 1.4A {Edwardsiella piscicida}
Probab=31.58 E-value=64 Score=21.79 Aligned_cols=16 Identities=19% Similarity=0.391 Sum_probs=0.0 Template_Neff=6.900
Q ss_pred HHHHHHHHHhchhhcc
Q HBA9130488.1 21 IDEARKLLDFMPELRS 36 (86)
Q Consensus 21 v~EAR~lLD~MpELrP 36 (86)
.+||+.||+.++.|+|
T Consensus 23 ~~eA~~If~aL~~l~P 38 (88)
T 7Y6C_E 23 RAEMHDILNALPDWLD 38 (88)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHcCC
No 38
>1CTF_A RIBOSOMAL PROTEIN L7/L12; RIBOSOMAL PROTEIN; 1.7A {Escherichia coli} SCOP: d.45.1.1
Probab=31.52 E-value=73 Score=18.25 Aligned_cols=13 Identities=31% Similarity=0.647 Sum_probs=0.0 Template_Neff=10.400
Q ss_pred cHHHHHHHHHhch
Q HBA9130488.1 20 DIDEARKLLDFMP 32 (86)
Q Consensus 20 sv~EAR~lLD~Mp 32 (86)
+.++|+.+++++|
T Consensus 33 ~~~~a~~~~~~~p 45 (74)
T 1CTF_A 33 GLKEAKDLVESAP 45 (74)
T ss_dssp CHHHHHHHHHTCS
T ss_pred CHHHHHHHHHhCC
No 39
>PF11855.12 ; DUF3375 ; Protein of unknown function (DUF3375)
Probab=31.39 E-value=1e+02 Score=26.22 Aligned_cols=30 Identities=17% Similarity=0.177 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred hHHHHHHHcCCcEEEccHHHHHHHHHhchhh
Q HBA9130488.1 4 RRYIADLRNGKDVIVSDIDEARKLLDFMPEL 34 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~sv~EAR~lLD~MpEL 34 (86)
+++|+.|+.| +|.+-|..++++-+.+.-++
T Consensus 149 ~~eI~~l~~G-~~~~~~~~~i~er~~~i~~l 178 (468)
T Q8NLY0_CORGL/1 149 ERQIEAVHAG-EFEVLTTVQIGDRVADILDL 178 (468)
T ss_pred HHHHHHHHcC-CCccCChHHHHHHHHHHHHH
No 40
>PF14430.10 ; Imm1 ; Immunity protein Imm1
Probab=31.29 E-value=83 Score=22.44 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=0.0 Template_Neff=8.300
Q ss_pred CCcEEEccHHHHHHHHHhchhhcc
Q HBA9130488.1 13 GKDVIVSDIDEARKLLDFMPELRS 36 (86)
Q Consensus 13 G~dv~V~sv~EAR~lLD~MpELrP 36 (86)
|..+.|.|.+|+.+||+.|-...+
T Consensus 2 ~~~~~v~t~~ev~~ll~~l~~~~~ 25 (155)
T Q9ACV1_STRCO/8 2 AGEIYARTKEEVDSLIDHIMSDLI 25 (155)
T ss_pred CCcEEcCCHHHHHHHHHHHHhchH
No 41
>6T8H_B DP2 subunit of D-family DNA-polymerase; PCNA, DP2, PolD, DP1, REPLICATION, PIP-box; 3.77A {Pyrococcus abyssi (strain GE5 / Orsay)}
Probab=31.14 E-value=63 Score=32.25 Aligned_cols=25 Identities=28% Similarity=0.376 Sum_probs=0.0 Template_Neff=5.800
Q ss_pred HHcCCcEEEccHHHHHHHHHhchhh
Q HBA9130488.1 10 LRNGKDVIVSDIDEARKLLDFMPEL 34 (86)
Q Consensus 10 LRnG~dv~V~sv~EAR~lLD~MpEL 34 (86)
|+||.-|.|+|++||+++-+...++
T Consensus 414 L~dGsvvrv~~~~~a~~i~~~I~~I 438 (1275)
T 6T8H_B 414 LKDGSVLRVDDYNLALKVREDVEEI 438 (1275)
T ss_dssp ETTSCEEECCSHHHHHHHSTTEEEE
T ss_pred cCCCCEEEeCCHHHHHHhhhchhhH
No 42
>3FLD_A Protein traI; NOVEL ALPHA/BETA CORE DOMAIN, ALTERNATIVE INITIATION, ATP- BINDING, CONJUGATION, DNA-BINDING, HELICASE, HYDROLASE, NUCLEOTIDE-BINDING, PLASMID, ATP-binding; HET: SO4; 2.4A {Escherichia coli K-12}
Probab=31.03 E-value=87 Score=22.91 Aligned_cols=23 Identities=17% Similarity=0.528 Sum_probs=0.0 Template_Neff=7.400
Q ss_pred HcCCcEEEccHHHHHHHHHhchh
Q HBA9130488.1 11 RNGKDVIVSDIDEARKLLDFMPE 33 (86)
Q Consensus 11 RnG~dv~V~sv~EAR~lLD~MpE 33 (86)
+||+.+.+.|+.||..+.-.-|+
T Consensus 103 ~ng~t~~a~~l~ea~~~a~~~p~ 125 (153)
T 3FLD_A 103 RNGESLLADNMQDGVRIARDNPD 125 (153)
T ss_dssp SSSEEEEESSHHHHHHHHHHCTT
T ss_pred cCCceEEEccHHHHHHHHHHCCC
No 43
>PF07057.15 ; TraI_C ; DNA helicase TraI, C-terminal
Probab=30.96 E-value=90 Score=23.34 Aligned_cols=23 Identities=26% Similarity=0.606 Sum_probs=0.0 Template_Neff=6.900
Q ss_pred HcCCcEEEccHHHHHHHHHhchh
Q HBA9130488.1 11 RNGKDVIVSDIDEARKLLDFMPE 33 (86)
Q Consensus 11 RnG~dv~V~sv~EAR~lLD~MpE 33 (86)
+||+.+.+.|++||..+.-.-|+
T Consensus 115 ~ng~t~~a~~l~ea~~~a~~~p~ 137 (161)
T A0A4R6E189_9EN 115 RNGDTLVASSVEQGMALAQHHPD 137 (161)
T ss_pred CCCceEEECCHHHHHHHHHHCCC
No 44
>PF04981.17 ; NMD3 ; NMD3 family
Probab=30.67 E-value=30 Score=25.65 Aligned_cols=25 Identities=28% Similarity=0.671 Sum_probs=0.0 Template_Neff=8.900
Q ss_pred HHHHHcCCcEEEccHHHHHHHHHhc
Q HBA9130488.1 7 IADLRNGKDVIVSDIDEARKLLDFM 31 (86)
Q Consensus 7 Id~LRnG~dv~V~sv~EAR~lLD~M 31 (86)
|+.+++|-|+++.|-.-||.+...+
T Consensus 171 i~~~~~G~D~~~~s~~~A~~ia~~l 195 (229)
T A0A1X7T227_AMP 171 IKEIKGGLDFYYAQKQDARKMVEFI 195 (229)
T ss_pred EEEecCceEEEeCCHHHHHHHHHHH
No 45
>1GL2_C VESICLE TRANSPORT V-SNARE PROTEIN VTI1-LIKE 1; MEMBRANE PROTEIN, MEMBRANE FUSION PROTEIN COMPLEX, COILED COIL, TRANSMEMBRANE, TRANSPORT; 1.9A {RATTUS NORVEGICUS} SCOP: h.1.15.1, l.1.1.1
Probab=30.56 E-value=27 Score=19.52 Aligned_cols=30 Identities=20% Similarity=0.227 Sum_probs=0.0 Template_Neff=10.400
Q ss_pred hhhHHHHHHHcCCcEEEccHHHHHHHHHhc
Q HBA9130488.1 2 LQRRYIADLRNGKDVIVSDIDEARKLLDFM 31 (86)
Q Consensus 2 ~q~~~Id~LRnG~dv~V~sv~EAR~lLD~M 31 (86)
.|+.+|...+..-+-...++.+|+.+|..|
T Consensus 34 ~q~e~l~~~~~~~~~~~~~~~~a~~~l~~m 63 (65)
T 1GL2_C 34 EQRDQLERTKSRLVNTNENLSKSRKILRSM 63 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 46
>4YTK_A Transcription elongation factor SPT5; transcription, elongation, RNA processing, protein-DNA interaction.; 1.0904A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
Probab=30.41 E-value=39 Score=23.08 Aligned_cols=8 Identities=75% Similarity=1.518 Sum_probs=0.0 Template_Neff=8.600
Q ss_pred CCcccccc
Q HBA9130488.1 62 RGTYRGDL 69 (86)
Q Consensus 62 ~GTYRGDL 69 (86)
.|.|+|||
T Consensus 11 ~G~YkgDl 18 (130)
T 4YTK_A 11 RGIYKGDL 18 (130)
T ss_dssp SSTTTTCE
T ss_pred ccCCCCCe
No 47
>PF20099.3 ; DUF6489 ; Family of unknown function (DUF6489)
Probab=29.31 E-value=58 Score=22.33 Aligned_cols=9 Identities=33% Similarity=0.697 Sum_probs=0.0 Template_Neff=5.700
Q ss_pred cHHHHHHHH
Q HBA9130488.1 20 DIDEARKLL 28 (86)
Q Consensus 20 sv~EAR~lL 28 (86)
|.+|||++|
T Consensus 10 TPeEaR~fl 18 (80)
T A0A1V1PLH7_9PR 10 SPEEARRFM 18 (80)
T ss_pred CHHHHHHHc
No 48
>PF20984.1 ; PT26-6P_helical ; PT26-6P, helical domain
Probab=29.30 E-value=71 Score=24.61 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=0.0 Template_Neff=4.500
Q ss_pred hhhHHHHHHHcCCcEEEccHHHHHHHHHhc
Q HBA9130488.1 2 LQRRYIADLRNGKDVIVSDIDEARKLLDFM 31 (86)
Q Consensus 2 ~q~~~Id~LRnG~dv~V~sv~EAR~lLD~M 31 (86)
.+-++|..|.+-..|+.++.+-++.+++.|
T Consensus 5 ~~~~eI~~l~~d~~ite~d~e~i~~~~~s~ 34 (138)
T F6BBP3_METIK/4 5 ERVQEIAELLQKDEMTDEDIARIQDTLATM 34 (138)
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
No 49
>PF16733.9 ; NRho ; Rhomboid N-terminal domain
Probab=29.29 E-value=1.2e+02 Score=17.74 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=0.0 Template_Neff=9.600
Q ss_pred cCCcEEEccH---HHHHHHHHhc
Q HBA9130488.1 12 NGKDVIVSDI---DEARKLLDFM 31 (86)
Q Consensus 12 nG~dv~V~sv---~EAR~lLD~M 31 (86)
++..|+|.+. ++|+++|..+
T Consensus 36 ~~~~l~v~~~~~~~~A~~~l~~~ 58 (69)
T Q9HZC2_PSEAE/1 36 GQQVLWVPDERLAEQVRELYRRY 58 (69)
T ss_pred CeEEEEECCHHHHHHHHHHHHHc
No 50
>1S7I_A hypothetical protein PA1349; Structural Genomics, protein structure initiative, Pseudomonas aeruginosa, MCSG, PSI, Midwest Center for Structural Genomics, UNKNOWN FUNCTION; 1.8A {Pseudomonas aeruginosa} SCOP: d.58.4.9, l.1.1.1
Probab=29.08 E-value=1.1e+02 Score=19.70 Aligned_cols=17 Identities=18% Similarity=0.423 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred EEEccHHHHHHHHHhch
Q HBA9130488.1 16 VIVSDIDEARKLLDFMP 32 (86)
Q Consensus 16 v~V~sv~EAR~lLD~Mp 32 (86)
|.+.|.+||.+++..-|
T Consensus 90 i~a~~~eea~~~~~~~P 106 (124)
T 1S7I_A 90 IEARDLNQALQIAAKIP 106 (124)
T ss_dssp EEESSHHHHHHHHTTCG
T ss_pred EEECCHHHHHHHHhhCC
No 51
>2KPQ_A Uncharacterized protein; Protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, UNKNOWN FUNCTION; NMR {Agrobacterium tumefaciens str. C58}
Probab=28.99 E-value=1.3e+02 Score=20.17 Aligned_cols=19 Identities=32% Similarity=0.401 Sum_probs=0.0 Template_Neff=7.800
Q ss_pred cCCcEEEccHHHHHHHHHh
Q HBA9130488.1 12 NGKDVIVSDIDEARKLLDF 30 (86)
Q Consensus 12 nG~dv~V~sv~EAR~lLD~ 30 (86)
.|....|+|+.||-++|.+
T Consensus 23 ~g~~~~I~s~~eA~~~L~~ 41 (100)
T 2KPQ_A 23 NGAPRIFNGVYEAFDFLQH 41 (100)
T ss_dssp TSCEEEEEEHHHHHHHHHH
T ss_pred CCCcEEECCHHHHHHHHHh
No 52
>6CVQ_B Aprataxin; protein-DNA complex, DNA repair, 5'-DNA end processing, Histidine Triad domain, HIT domain, Zinc-finger, 5'-DNA end recognition; HET: BME, AMP, GOL; 1.65A {Homo sapiens}
Probab=26.76 E-value=50 Score=22.44 Aligned_cols=32 Identities=28% Similarity=0.447 Sum_probs=0.0 Template_Neff=10.300
Q ss_pred hHHHHHHHcCCcEEEccHHHHHHHH-------------Hhchhhccc
Q HBA9130488.1 4 RRYIADLRNGKDVIVSDIDEARKLL-------------DFMPELRSH 37 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~sv~EAR~lL-------------D~MpELrP~ 37 (86)
+.-|+.|++++.|.+. .++++.+ ++|++|+.|
T Consensus 131 ~~v~~~l~~~~~~~~~--~~~~~~~~~~~~c~~c~~~~~~~~~~~~h 175 (180)
T 6CVQ_B 131 QAVIEMVQEAGRVTVR--DGMPELLKLPLRCHECQQLLPSIPQLKEH 175 (180)
T ss_dssp HHHHHHHHHHSSCCCC--TTHHHHTTSCCBCTTTCCBCSSHHHHHHH
T ss_pred HHHHHHHHHcCCcccC--CCcHHHhcCCeeCCCCCCcccCHHHHHHH
No 53
>8IAH_Y Tropomodulin-1; Macrocomplex, membrane skeleton, spectrin-actin junction, MEMBRANE PROTEIN; HET: ADP;{Sus scrofa}
Probab=26.57 E-value=2.3e+02 Score=22.35 Aligned_cols=41 Identities=24% Similarity=0.321 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred cHHHHHHHHHhchhhcccccCCCCCCCCcccCCCCCCccCCCCCccc
Q HBA9130488.1 20 DIDEARKLLDFMPELRSHVDNFPANSGYLFKDTPFGDVWKQPRGTYR 66 (86)
Q Consensus 20 sv~EAR~lLD~MpELrP~~~~~P~~~G~~~k~~~~~~~~~dP~GTYR 66 (86)
|.+|..+|-..|.++-|....+|.+.--- ...-+.|-|.|+
T Consensus 23 ~~~e~~~l~~~~~~~dp~~~~~p~~~r~~------~~~~k~~t~~~~ 63 (359)
T 8IAH_Y 23 TEEELRTLENELDELDPDNALLPAGLRQK------DQTTKAPTGPFK 63 (359)
T ss_pred CHHHHHHHHHHhhhcCCCcCcCCCCcccc------cCCCCCCCCCCC
No 54
>7QV8_D DNA_repair_protein_BRCA2_-_putative; BRC repeat, homologous recombination, Rad51, recombinase. BRCA2, RECOMBINATION; HET: ADP; 2.15A {Leishmania infantum}
Probab=26.47 E-value=1.2e+02 Score=18.32 Aligned_cols=20 Identities=25% Similarity=0.360 Sum_probs=0.0 Template_Neff=4.700
Q ss_pred cCCcEEEcc--HHHHHHHHHhc
Q HBA9130488.1 12 NGKDVIVSD--IDEARKLLDFM 31 (86)
Q Consensus 12 nG~dv~V~s--v~EAR~lLD~M 31 (86)
.|+.|.|++ ...||.+|..+
T Consensus 12 sGK~V~VS~~al~KAk~lf~e~ 33 (35)
T 7QV8_D 12 SGKPVTVRRESLQKVAERLGDL 33 (35)
T ss_dssp TSCEEEEEHHHHC---------
T ss_pred CCCCCeeCHHHHHHHHHHHHhh
No 55
>PF06497.15 ; Baculo_Ac102 ; Baculovirus Ac102
Probab=25.89 E-value=1.5e+02 Score=21.50 Aligned_cols=31 Identities=19% Similarity=0.475 Sum_probs=0.0 Template_Neff=4.300
Q ss_pred hHHHHHH-HcCCcEEEccHHHHHHHHHhchhh
Q HBA9130488.1 4 RRYIADL-RNGKDVIVSDIDEARKLLDFMPEL 34 (86)
Q Consensus 4 ~~~Id~L-RnG~dv~V~sv~EAR~lLD~MpEL 34 (86)
++-++.+ .++.++.+....+|-++|+.|..+
T Consensus 54 K~il~~I~e~~~~~i~ln~~~ainvL~~lsdI 85 (90)
T Q91EX1_GVCPM/8 54 KRMLNGIDEDNDHIIVRGADDAIDILEVVYGI 85 (90)
T ss_pred HHHHhccccCCCcceecCHHHHHHHHHHHHHH
No 56
>PF01535.24 ; PPR ; PPR repeat
Probab=25.01 E-value=78 Score=10.75 Aligned_cols=16 Identities=25% Similarity=0.326 Sum_probs=0.0 Template_Neff=15.000
Q ss_pred EccHHHHHHHHHhchh
Q HBA9130488.1 18 VSDIDEARKLLDFMPE 33 (86)
Q Consensus 18 V~sv~EAR~lLD~MpE 33 (86)
.....++..++..|.+
T Consensus 13 ~~~~~~~~~~~~~~~~ 28 (31)
T PP352_ARATH/27 13 RGMLDEAKKVYEGLEG 28 (31)
T ss_pred CCCHHHHHHHHHHHHh
No 57
>5XLP_M Uncharacterized protein AcrF1; anti-CRISPR proteins, Csy complex, Type I-F CRISPR/Cas system, IMMUNE SYSTEM-RNA complex;{Pseudomonas aeruginosa (strain UCBPP-PA14)}
Probab=25.00 E-value=91 Score=22.46 Aligned_cols=14 Identities=7% Similarity=0.188 Sum_probs=0.0 Template_Neff=1.500
Q ss_pred ccHHHHHHHHHhch
Q HBA9130488.1 19 SDIDEARKLLDFMP 32 (86)
Q Consensus 19 ~sv~EAR~lLD~Mp 32 (86)
.|+|.|.+.||+||
T Consensus 45 ~S~EQ~~~WF~~~P 58 (78)
T 5XLP_M 45 DSTEQLESWFYGLP 58 (78)
T ss_dssp SCHHHHHHHHHTSC
T ss_pred CcHHHHHHHHhCCC
No 58
>PF20829.1 ; Acr30-35_AcrF1 ; Anti-CRISPR protein Acr30-35/AcrF1
Probab=25.00 E-value=91 Score=22.46 Aligned_cols=14 Identities=7% Similarity=0.188 Sum_probs=0.0 Template_Neff=1.500
Q ss_pred ccHHHHHHHHHhch
Q HBA9130488.1 19 SDIDEARKLLDFMP 32 (86)
Q Consensus 19 ~sv~EAR~lLD~Mp 32 (86)
.|+|.|.+.||+||
T Consensus 45 ~S~EQ~~~WF~~~P 58 (78)
T L7P7M1_9CAUD/1 45 DSTEQLESWFYGLP 58 (78)
T ss_pred CcHHHHHHHHhCCC
No 59
>5ZKM_A SP_0782; protein-DNA complex, UNKNOWN FUNCTION-DNA complex; 1.65A {Streptococcus pneumoniae TIGR4}
Probab=24.74 E-value=99 Score=21.84 Aligned_cols=19 Identities=16% Similarity=0.169 Sum_probs=0.0 Template_Neff=4.700
Q ss_pred cHHHHHHHHHhchhhcccc
Q HBA9130488.1 20 DIDEARKLLDFMPELRSHV 38 (86)
Q Consensus 20 sv~EAR~lLD~MpELrP~~ 38 (86)
+.+||+.|.+.+.++-||+
T Consensus 60 t~eE~~~L~~~L~~~~~~~ 78 (82)
T 5ZKM_A 60 SNEEFQTMVDAFKGNLEHH 78 (82)
T ss_dssp CHHHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHHcccccc
No 60
>8FKV_NM Protein MAK16 homolog; Pre-60S ribosomal subunit, Assembly intermediate, Ribosome, Nucleoprotein complex; HET: ADP, GDP, SEP, AME, MG; 2.47A {Homo sapiens}
Probab=24.16 E-value=58 Score=27.93 Aligned_cols=8 Identities=75% Similarity=1.502 Sum_probs=0.0 Template_Neff=4.500
Q ss_pred Ccccccccc
Q HBA9130488.1 63 GTYRGDLYN 71 (86)
Q Consensus 63 GTYRGDLiN 71 (86)
|+| |||||
T Consensus 173 G~Y-GdiyN 180 (300)
T 8FKV_NM 173 DTY-GDIYN 180 (300)
T ss_pred CCC-Ccccc
No 61
>PF11459.12 ; AbiEi_3 ; Transcriptional regulator, AbiEi antitoxin, Type IV TA system
Probab=24.09 E-value=88 Score=22.84 Aligned_cols=17 Identities=35% Similarity=0.432 Sum_probs=0.0 Template_Neff=7.400
Q ss_pred cHHHHHHHHHhchhhcc
Q HBA9130488.1 20 DIDEARKLLDFMPELRS 36 (86)
Q Consensus 20 sv~EAR~lLD~MpELrP 36 (86)
+.|||.++|+.|+.|+|
T Consensus 72 g~ee~~~~le~l~~L~~ 88 (151)
T E8RLJ6_ASTEC/9 72 DLIESYELLQGLLNLRP 88 (151)
T ss_pred CHHHHHHHHHhhccCCH
No 62
>PF06169.16 ; DUF982 ; Protein of unknown function (DUF982)
Probab=23.97 E-value=1.5e+02 Score=18.40 Aligned_cols=19 Identities=11% Similarity=-0.060 Sum_probs=0.0 Template_Neff=8.300
Q ss_pred HcCCcEEEccHHHHHHHHHh
Q HBA9130488.1 11 RNGKDVIVSDIDEARKLLDF 30 (86)
Q Consensus 11 RnG~dv~V~sv~EAR~lLD~ 30 (86)
..|... |+|++||..+|.+
T Consensus 9 ~~g~~~-I~~~~~A~~~L~~ 27 (72)
T Q1QIU5_NITHX/8 9 ETSHYT-IRSAWEGLEYLLR 27 (72)
T ss_pred CCCcEE-EcCHHHHHHHHHH
No 63
>5A79_A CAPSID PROTEIN; BSMV, VIRUS, HELICAL, CRYO-EM, IMAGE PROCESSING, MSA; 4.1A {TOBACCO MOSAIC VIRUS (STRAIN OM)}
Probab=23.29 E-value=4.5e+02 Score=21.18 Aligned_cols=55 Identities=15% Similarity=0.221 Sum_probs=0.0 Template_Neff=5.500
Q ss_pred HHHHHHHcCCcEEEccHHHHHHHHHhchhhcccccC--CCCCCCCcccCCCCCCccCCCCCcc
Q HBA9130488.1 5 RYIADLRNGKDVIVSDIDEARKLLDFMPELRSHVDN--FPANSGYLFKDTPFGDVWKQPRGTY 65 (86)
Q Consensus 5 ~~Id~LRnG~dv~V~sv~EAR~lLD~MpELrP~~~~--~P~~~G~~~k~~~~~~~~~dP~GTY 65 (86)
.-+..||.-+=-..++-+++|++|..++---|.... ||.+.|.+ +-.-+.|..-|
T Consensus 41 ~~L~~l~~~~F~vqs~R~~v~~~l~~L~~~~Pfs~~~RFP~~~g~~------g~~~y~~~~~y 97 (198)
T 5A79_A 41 KFLDNLRGINFSVASSRSQVAEYLAALDRDLPADVDRRFAGARGQI------GSPNYLPAPKF 97 (198)
T ss_dssp HHHHHTTSCCTTSTTSSHHHHHHHTTSCBCCSCCSSBCCCCCCCCS------SSSCCCCCCCE
T ss_pred HHHHHHHcCCCcccccHHHHHHHHHhcCCCCCCCCCCCCCCccCCC------CCCCCCCCCEE
No 64
>1XQA_B Glyoxalase/Bleomycin resistance protein; Dioxygenase, Glyoxalase/Bleomycin resistance, structural genomics, Midwest Center for Structural Genomics, MCSG, Protein Structure Initiative, PSI, UNKNOWN; HET: P6G, MSE; 1.8A {Bacillus cereus ATCC 14579} SCOP: d.32.1.2
Probab=22.64 E-value=1.7e+02 Score=16.24 Aligned_cols=21 Identities=29% Similarity=0.373 Sum_probs=0.0 Template_Neff=12.800
Q ss_pred EEEccHHHHHHHHHhchhhcc
Q HBA9130488.1 16 VIVSDIDEARKLLDFMPELRS 36 (86)
Q Consensus 16 v~V~sv~EAR~lLD~MpELrP 36 (86)
+.|++++++++.+..+-.+++
T Consensus 9 ~~~~d~~~~~~fy~~~lg~~~ 29 (113)
T 1XQA_B 9 LTVADVVAAREFLEKYFGLTC 29 (113)
T ss_dssp EEESCHHHHHHHHHHHHCCEE
T ss_pred EEeCCHHHHHHHHHHhhCcEE
No 65
>2HYZ_A SYNTHETIC CONSENSUS TPR PROTEIN; TPR, tetratricopeptide, protein design, protein stability, superhelix, DE NOVO PROTEIN; 2.3A {N/A}
Probab=22.59 E-value=1.5e+02 Score=16.54 Aligned_cols=18 Identities=33% Similarity=0.302 Sum_probs=0.0 Template_Neff=13.400
Q ss_pred ccHHHHHHHHHhchhhcc
Q HBA9130488.1 19 SDIDEARKLLDFMPELRS 36 (86)
Q Consensus 19 ~sv~EAR~lLD~MpELrP 36 (86)
...++|+.+++.|.++.|
T Consensus 117 ~~~~~a~~~~~~~~~~~~ 134 (136)
T 2HYZ_A 117 GDYDEAIEYYQKALELDP 134 (136)
T ss_dssp TCHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHhhCC
No 66
>4MVE_B Uncharacterized protein; Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION; HET: MSE; 2.11A {Thermomonospora curvata}
Probab=22.45 E-value=1.7e+02 Score=20.96 Aligned_cols=48 Identities=19% Similarity=0.299 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred hHHHHHHHcCCcEEEccHHHHHHHHHhchhhcccccCCCCCCCCcccCCCCCCccCCCCCccccccccCCCC
Q HBA9130488.1 4 RRYIADLRNGKDVIVSDIDEARKLLDFMPELRSHVDNFPANSGYLFKDTPFGDVWKQPRGTYRGDLYNTKDP 75 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~sv~EAR~lLD~MpELrP~~~~~P~~~G~~~k~~~~~~~~~dP~GTYRGDLiN~kdP 75 (86)
+.++..|++.. ..-|.+|+.+||+..|-..+ -...|.|+|-++....|
T Consensus 7 ~~~~~~l~~~~--~~~~~~el~~lF~~L~~~~~----------------------~~l~G~w~G~~l~~g~~ 54 (151)
T 4MVE_B 7 EQRLAKIIASG--DECDRATVEELYDRLAPVPV----------------------DFMLGTWRGGIFDRGDA 54 (151)
T ss_dssp HHHHHHHHHHT--CCCCHHHHHHHHTTSCBCCH----------------------HHHCEEEEEEESCSSSH
T ss_pred HHHHHHHHHcC--CCCCHHHHHHHHHhCCCCCH----------------------HHcCCccceEEecCCCh
No 67
>4NJC_G Geobacillus stearothermophilus YkzG; DNA Dependant RNA Polymerase, TRANSCRIPTION; HET: MSE; 2.3A {Geobacillus stearothermophilus}
Probab=21.67 E-value=1.4e+02 Score=20.77 Aligned_cols=17 Identities=18% Similarity=0.270 Sum_probs=0.0 Template_Neff=3.300
Q ss_pred EEEccHHHHHHHHHhch
Q HBA9130488.1 16 VIVSDIDEARKLLDFMP 32 (86)
Q Consensus 16 v~V~sv~EAR~lLD~Mp 32 (86)
|.+.|..|||++|.+-|
T Consensus 32 iEA~se~evR~~l~~t~ 48 (65)
T 4NJC_G 32 IEAESERDVRRKLEGRP 48 (65)
T ss_dssp EECSSHHHHHHHHTTSS
T ss_pred EEcCCHHHHHHHhcCCC
No 68
>PF05008.19 ; V-SNARE ; Vesicle transport v-SNARE protein N-terminus
Probab=21.66 E-value=1.2e+02 Score=18.34 Aligned_cols=11 Identities=27% Similarity=0.422 Sum_probs=0.0 Template_Neff=9.600
Q ss_pred HHHHHHHHHhc
Q HBA9130488.1 21 IDEARKLLDFM 31 (86)
Q Consensus 21 v~EAR~lLD~M 31 (86)
++||+.+|..|
T Consensus 35 l~ea~~~l~~m 45 (80)
T A7S502_NEMVE/1 35 IENAFIIIDEL 45 (80)
T ss_pred HHHHHHHHHHH
No 69
>PF02184.20 ; HAT ; HAT (Half-A-TPR) repeat
Probab=21.62 E-value=1.7e+02 Score=14.47 Aligned_cols=18 Identities=22% Similarity=0.416 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred ccHHHHHHHHHhchhhcc
Q HBA9130488.1 19 SDIDEARKLLDFMPELRS 36 (86)
Q Consensus 19 ~sv~EAR~lLD~MpELrP 36 (86)
..++.||++++..-+..|
T Consensus 1 ~~~~~~R~~~~r~l~~~p 18 (32)
T CRN_DROME/191- 1 KEIDRAREIYERFVYVHP 18 (32)
T ss_pred ChHHHHHHHHHHHHHHCC
No 70
>PF02495.21 ; TGBp3 ; Triple gene block 3
Probab=21.57 E-value=65 Score=20.97 Aligned_cols=26 Identities=19% Similarity=0.372 Sum_probs=0.0 Template_Neff=5.600
Q ss_pred cCCcEEEccHHHHHHHHHhchhhccc
Q HBA9130488.1 12 NGKDVIVSDIDEARKLLDFMPELRSH 37 (86)
Q Consensus 12 nG~dv~V~sv~EAR~lLD~MpELrP~ 37 (86)
.|+.|++..=+.-.++++.+..|||.
T Consensus 32 TGeSv~i~gC~~~~~~~~~i~~Lkp~ 57 (59)
T Q333K5_CVB/6-6 32 TGEAVRISGCTFDRTFVELVKGLKPA 57 (59)
T ss_pred cCCcEEEECCCCCHHHHHHHhccCCC
No 71
>8AS8_E JetA; SMC complexes, bacterial immunity, defense system, DNA loop extrusion, Wadjet, JetABCD, DNA cleavage, plasmid restriction, mksBEFG; HET: ADP; 3.0A {Escherichia coli}
Probab=21.56 E-value=1.9e+02 Score=25.61 Aligned_cols=30 Identities=17% Similarity=0.233 Sum_probs=0.0 Template_Neff=7.400
Q ss_pred hHHHHHHHcCCcEEEccHHHHHHHHHhchhh
Q HBA9130488.1 4 RRYIADLRNGKDVIVSDIDEARKLLDFMPEL 34 (86)
Q Consensus 4 ~~~Id~LRnG~dv~V~sv~EAR~lLD~MpEL 34 (86)
+++|+.|+.|+ |.+-+..++++-+.+.-.+
T Consensus 217 ~~eI~~l~~G~-v~~l~~~qi~E~~~~i~~l 246 (554)
T 8AS8_E 217 ERELQEAEAGH-IEVLETHQAVEHIRDVYNL 246 (554)
T ss_dssp HHHHHHHHTTC-CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-CccCCHHHHHHHHHHHHHH
No 72
>6W1S_F Mediator of RNA polymerase II transcription subunit 9; mouse mediator, complex, GENE REGULATION; 4.02A {Mus musculus}
Probab=21.46 E-value=1.1e+02 Score=20.10 Aligned_cols=14 Identities=43% Similarity=0.733 Sum_probs=0.0 Template_Neff=6.900
Q ss_pred HHHHHHHHHhchhh
Q HBA9130488.1 21 IDEARKLLDFMPEL 34 (86)
Q Consensus 21 v~EAR~lLD~MpEL 34 (86)
.+.||++++.||.+
T Consensus 30 ~~~ar~~l~~lpgi 43 (76)
T 6W1S_F 30 FQELRKLIGTMPGI 43 (76)
T ss_dssp HHHHHHHHC-----
T ss_pred HHHHHHHHHcCCCC
No 73
>PF18330.5 ; Lig_C ; Ligase Pab1020 C-terminal region
Probab=21.32 E-value=2.9e+02 Score=20.11 Aligned_cols=27 Identities=19% Similarity=0.143 Sum_probs=0.0 Template_Neff=6.300
Q ss_pred HHHHHHHcCCcEE------EccHHHHHHHHHhc
Q HBA9130488.1 5 RYIADLRNGKDVI------VSDIDEARKLLDFM 31 (86)
Q Consensus 5 ~~Id~LRnG~dv~------V~sv~EAR~lLD~M 31 (86)
+-|+++++|+.|+ |++.+.|.++++.|
T Consensus 52 eai~~v~~g~~v~e~f~irf~~~~~~~~~~~hl 84 (121)
T O29409_ARCFU/2 52 ESIRECKRGEMVCEESELVFESPDVLELFKLHM 84 (121)
T ss_pred HHHHHHHcCCceeEEEEEEeCCHHHHHHHHHHH
No 74
>PF08485.14 ; Polysacc_syn_2C ; Polysaccharide biosynthesis protein C-terminal
Probab=21.27 E-value=1.5e+02 Score=15.84 Aligned_cols=16 Identities=19% Similarity=0.432 Sum_probs=0.0 Template_Neff=9.900
Q ss_pred cHHHHHHHHHhchhhc
Q HBA9130488.1 20 DIDEARKLLDFMPELR 35 (86)
Q Consensus 20 sv~EAR~lLD~MpELr 35 (86)
|++|.++||..+..++
T Consensus 33 ~~~el~~ll~~~~~~~ 48 (48)
T B9M562_GEODF/2 33 DVQEVKELMLKLDYIK 48 (48)
T ss_pred CHHHHHHHHhcccccC