Query FD01543135_04329 hypothetical protein
Match_columns 177
No_of_seqs 29 out of 35
Neff 3.58139
Searched_HMMs 86581
Date Tue Feb 27 23:47:47 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/4436608.hhr -oa3m ../results/4436608.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF18347.5 ; DUF5606 ; Domain o 40.8 28 0.00033 24.4 1.1 20 146-165 2-21 (46)
2 PF14462.10 ; Prok-E2_E ; Proka 37.4 1.2E+02 0.0014 23.3 4.1 31 124-155 3-33 (122)
3 PF13991.10 ; BssS ; BssS prote 36.0 71 0.00081 22.8 2.5 22 41-62 33-54 (69)
4 PF03243.19 ; MerB ; Alkylmercu 30.3 61 0.0007 25.3 1.5 38 25-62 84-122 (122)
5 PF20099.3 ; DUF6489 ; Family o 21.0 92 0.0011 24.1 1.0 10 50-59 9-18 (80)
No 1
>PF18347.5 ; DUF5606 ; Domain of unknown function (DUF5606)
Probab=40.80 E-value=28 Score=24.44 Aligned_cols=20 Identities=30% Similarity=0.511 Sum_probs=0.0 Template_Neff=5.100
Q ss_pred EEEEEEccCHHHHHHHCCee
Q FD01543135_043 146 KTYIKITGYAGLRRILNGVR 165 (177)
Q Consensus 146 k~YIKITGypgLRrILnGTR 165 (177)
++.+-|+|.|||=+++..++
T Consensus 2 ~~IvsIsGkpGLfk~vs~~k 21 (46)
T A0A0S2I5B1_9BA 2 KDILAITGEPGLYKLVSKTP 21 (46)
T ss_pred CceEEEeCCcchhhhcccCC
No 2
>PF14462.10 ; Prok-E2_E ; Prokaryotic E2 family E
Probab=37.39 E-value=1.2e+02 Score=23.31 Aligned_cols=31 Identities=13% Similarity=-0.057 Sum_probs=0.0 Template_Neff=8.900
Q ss_pred HHHHHHhhhccCceEEEEEECCEEEEEEccCH
Q FD01543135_043 124 NNLAWNISQVWKVKAITYIANGKTYIKITGYA 155 (177)
Q Consensus 124 ~~lv~~~k~l~gIKA~~y~~nGk~YIKITGyp 155 (177)
.+.+..|+++ |.++.....+|..+|.|.+++
T Consensus 3 ~~~~~~L~~~-g~~~~~~~~~~~~~v~v~~~~ 33 (122)
T A1WP99_VEREI/1 3 DADERYLSSH-GVVFETVSDGAHTGVIFKQLP 33 (122)
T ss_pred HHHHHHHHHc-CCceEEEecCCeEEEEEeCcc
No 3
>PF13991.10 ; BssS ; BssS protein family
Probab=35.99 E-value=71 Score=22.83 Aligned_cols=22 Identities=18% Similarity=0.051 Sum_probs=0.0 Template_Neff=7.800
Q ss_pred ccCceEEEEEeHHHHHHHHHhh
Q FD01543135_043 41 TKKTVDIILLTIPEAMRLVYDK 62 (177)
Q Consensus 41 ~~nt~~i~LLTl~EA~~Il~dl 62 (177)
.......+.||++.|+++.++|
T Consensus 33 ~~~~~~~~~LT~eQAr~La~~L 54 (69)
T J7SKD0_MORMO/1 33 HAEVDKTMWLTTDVARQLIDIL 54 (69)
T ss_pred cCccCceeeeCHHHHHHHHHHH
No 4
>PF03243.19 ; MerB ; Alkylmercury lyase
Probab=30.32 E-value=61 Score=25.29 Aligned_cols=38 Identities=8% Similarity=0.197 Sum_probs=0.0 Template_Neff=8.400
Q ss_pred CCChHHhccccHHHHhccCc-eEEEEEeHHHHHHHHHhh
Q FD01543135_043 25 PQHPYLKDVQGLEEFQTKKT-VDIILLTIPEAMRLVYDK 62 (177)
Q Consensus 25 Pqhp~l~d~~~Le~~l~~nt-~~i~LLTl~EA~~Il~dl 62 (177)
|.-.||.+-..+|+..++.. ..-..||++||.++..++
T Consensus 84 ~~~~fF~s~e~~~~W~~~~~~~~g~~l~l~ea~~~a~~~ 122 (122)
T K0EVI4_NOCBR/9 84 DYNSFFASEEAAEQWRRAHPEIKGVTRAPEQMSRLITEL 122 (122)
T ss_pred CCeeeeCCHHHHHHHHHHCCCCCceEeCHHHHHHHHhcC
No 5
>PF20099.3 ; DUF6489 ; Family of unknown function (DUF6489)
Probab=21.04 E-value=92 Score=24.12 Aligned_cols=10 Identities=30% Similarity=0.318 Sum_probs=0.0 Template_Neff=5.700
Q ss_pred EeHHHHHHHH
Q FD01543135_043 50 LTIPEAMRLV 59 (177)
Q Consensus 50 LTl~EA~~Il 59 (177)
+|||||++.+
T Consensus 9 cTPeEaR~fl 18 (80)
T A0A1V1PLH7_9PR 9 CSPEEARRFM 18 (80)
T ss_pred cCHHHHHHHc