Query FD01845391_03387 hypothetical protein
Match_columns 184
No_of_seqs 145 out of 324
Neff 4.27538
Searched_HMMs 86581
Date Tue Feb 27 23:51:54 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/2975922.hhr -oa3m ../results/2975922.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF11860.12 ; Muramidase ; N-ac 100.0 1.7E-47 1.9E-52 300.9 16.0 154 18-184 1-173 (176)
2 5NM7_A Peptidoglycan-binding d 100.0 6.5E-46 7.6E-51 287.4 20.2 176 2-183 74-258 (266)
3 7RUM_B Endolysin; Endolysin, p 100.0 7.7E-41 8.9E-46 261.6 18.7 173 5-183 98-281 (285)
4 7Q4T_AAA Endolysin; endolysin, 100.0 1E-36 1.2E-41 237.3 19.9 177 1-184 21-203 (206)
5 7QVD_AAA Lytic murein transgly 96.8 0.0025 2.9E-08 57.7 3.8 124 5-148 79-204 (380)
6 5ANZ_A SOLUBLE LYTIC TRANSGLYC 96.4 0.0032 3.7E-08 58.0 1.8 122 5-148 120-245 (420)
7 PF06871.15 ; TraH_2 ; TraH_2 87.6 11 0.00012 33.0 9.1 124 5-182 3-132 (206)
8 4XP8_A EtgA protein; peptidogl 83.3 3.6 4.2E-05 27.3 3.5 27 8-34 4-30 (88)
9 PF13406.10 ; SLT_2 ; Transglyc 79.8 3.9 4.5E-05 37.1 3.5 122 5-148 75-200 (292)
10 4ANR_A SOLUBLE LYTIC TRANSGLYC 72.0 2.1 2.5E-05 39.7 -0.2 115 5-148 94-220 (323)
11 4HPE_C Putative cell wall hydr 68.7 14 0.00016 31.1 3.8 30 5-34 28-59 (308)
12 1LTM_A 36 KDA SOLUBLE LYTIC TR 67.9 21 0.00024 33.4 5.1 86 5-119 97-194 (320)
13 5J93_A Ferritin, middle subuni 66.3 13 0.00015 28.7 3.0 54 94-147 17-72 (176)
14 3PWF_A Rubrerythrin; Non heme 64.8 21 0.00024 28.0 3.9 63 94-156 11-73 (170)
15 1RCD_A L FERRITIN; IRON STORAG 64.2 16 0.00019 27.7 3.2 54 94-147 17-72 (173)
16 PF01464.24 ; SLT ; Transglycos 63.6 13 0.00015 26.4 2.5 26 8-33 3-28 (129)
17 7XA2_A Ferritin; protein assem 63.4 31 0.00036 24.4 4.3 54 94-147 12-65 (148)
18 7DIE_E Ferritin; Ferritin, Iro 63.4 26 0.00031 27.3 4.2 54 94-147 16-70 (179)
19 7PFH_A Ferritin; iron binding 63.3 27 0.00031 27.0 4.3 54 94-147 26-79 (182)
20 5WPN_A Ferritin; Ferritin, OXI 63.3 18 0.00021 27.5 3.3 55 93-147 16-72 (171)
21 7VP8_A Ferritin-like diiron do 62.9 27 0.00032 26.9 4.2 55 93-147 12-68 (172)
22 1S3Q_J ferritin; Ferroxidase, 61.9 29 0.00034 26.5 4.2 54 94-147 12-65 (173)
23 4DI0_A Rubrerythrin; SSGCID, s 61.6 23 0.00027 25.9 3.5 54 94-147 17-70 (144)
24 4CVR_A BACTERIOFERRITIN; OXIDO 61.1 23 0.00026 26.0 3.3 54 94-147 12-65 (159)
25 8GY1_A Ferritin; Ag+-bound DzF 59.4 21 0.00024 27.1 3.0 54 94-147 16-71 (169)
26 2V2P_A FERRITIN LIGHT CHAIN; M 59.3 25 0.00029 27.2 3.4 55 93-147 15-71 (174)
27 7O91_C Sulerythrin; sulerythri 58.7 27 0.00032 25.6 3.4 54 94-147 15-68 (146)
28 4ZTT_E Bacterial non-heme ferr 58.6 42 0.00048 24.8 4.4 55 93-147 10-64 (166)
29 3QZ3_C Ferritin; structural ge 58.4 37 0.00043 26.0 4.2 54 94-147 19-72 (184)
30 6TXI_C Ferritin; Metal binding 58.1 43 0.00049 24.6 4.3 54 94-147 12-65 (164)
31 4FDY_B Similar to lipoprotein, 57.6 29 0.00033 29.3 3.8 28 5-32 30-59 (313)
32 6LK9_A Coho salmon ferritin; c 57.2 1E+02 0.0012 23.5 6.4 67 75-147 2-70 (171)
33 1KRQ_A ferritin; bacterial non 57.0 43 0.00049 25.0 4.2 54 94-147 10-63 (167)
34 6A4U_E Ferritin; ferritin, cru 55.9 27 0.00031 26.4 3.0 54 94-147 16-71 (169)
35 3RCO_B Tudor domain-containing 55.3 11 0.00013 27.1 0.9 18 113-130 46-63 (89)
36 3BVK_F Ferritin; iron storage, 55.2 49 0.00057 25.5 4.4 54 94-147 24-77 (181)
37 PF07862.15 ; Nif11 ; Nif11 dom 54.1 76 0.00088 20.2 4.6 32 136-167 4-43 (51)
38 2LH9_A Tudor domain-containing 52.3 13 0.00015 25.8 0.9 18 113-130 41-58 (78)
39 8SQO_A Bacterioferritin; SSGCI 51.8 44 0.0005 24.8 3.6 54 94-147 15-68 (165)
40 1YUZ_A Nigerythrin; Rubrythrin 51.5 35 0.0004 27.3 3.2 54 94-147 33-86 (202)
41 5GN8_B Ferritin heavy chain; f 51.5 30 0.00034 25.8 2.7 55 93-147 19-75 (146)
42 6B8F_A Ferritin heavy chain; O 51.3 36 0.00042 26.4 3.2 54 94-147 20-75 (182)
43 1JIG_D Dlp-2; dodecamer, four- 50.2 24 0.00028 25.9 2.0 55 93-147 9-63 (146)
44 1Z6O_U Ferritin heavy chain; M 50.0 47 0.00054 26.4 3.7 55 93-147 24-80 (191)
45 1NFV_D bacterioferritin; bacte 49.9 29 0.00033 26.6 2.4 54 94-147 16-69 (179)
46 PF00210.28 ; Ferritin ; Ferrit 49.7 77 0.00089 22.2 4.4 55 93-147 3-57 (135)
47 PF14053.10 ; DUF4248 ; Domain 49.3 28 0.00032 25.3 2.1 34 127-160 2-46 (68)
48 4IWK_D Ferritin; ferritin, 4 h 48.9 65 0.00076 24.5 4.2 54 94-147 9-62 (168)
49 5ZND_A Ferritin heavy chain; F 48.2 37 0.00043 24.6 2.7 55 93-147 20-76 (134)
50 PF14071.10 ; YlbD_coat ; Putat 47.8 51 0.00059 27.3 3.6 29 139-167 1-31 (120)
51 2JD6_1 FERRITIN HOMOLOG; METAL 47.3 76 0.00088 23.9 4.3 55 93-147 9-63 (174)
52 1JI5_C Dlp-1; dodecamer, four- 47.2 27 0.00032 25.4 1.9 55 93-147 5-59 (142)
53 7URH_G Ferritin; Ferroxidase, 47.2 38 0.00044 25.6 2.7 53 94-146 15-69 (168)
54 3UOI_S Bacterioferritin; Struc 47.0 49 0.00057 24.3 3.2 54 94-147 13-66 (161)
55 3FXQ_B LysR type regulator of 46.8 53 0.00062 26.7 3.6 38 8-50 19-58 (305)
56 5YDW_A Cell density-dependent 46.3 49 0.00057 26.6 3.3 38 8-50 30-69 (304)
57 PF12244.12 ; DUF3606 ; Protein 44.7 80 0.00092 21.4 3.7 24 4-27 17-40 (53)
58 7XBE_A LysR family transcripti 44.4 63 0.00072 25.9 3.6 38 8-50 18-57 (288)
59 2VZB_A PUTATIVE BACTERIOFERRIT 44.3 58 0.00067 24.0 3.2 54 94-147 22-75 (170)
60 2CLB_D DPS-LIKE PROTEIN; DI-IR 43.5 68 0.00079 24.4 3.6 54 94-147 30-83 (188)
61 PF19367.3 ; DUF5943 ; Domain o 42.6 18 0.0002 26.0 0.3 67 44-110 19-95 (96)
62 7KE3_K Ferritin heavy chain,Ep 42.0 62 0.00071 26.4 3.3 55 93-147 20-76 (209)
63 4AM5_B BACTERIOFERRITIN; METAL 41.9 76 0.00087 23.4 3.5 55 93-147 10-64 (159)
64 3S93_A Tudor domain-containing 41.7 24 0.00027 26.1 0.9 18 113-130 44-61 (102)
65 PF04060.17 ; FeS ; Putative Fe 41.2 20 0.00023 20.4 0.3 23 112-134 3-25 (33)
66 7TBH_T Isoform 2 of CREB-bindi 41.2 57 0.00065 27.5 3.1 55 93-147 98-154 (260)
67 3NKZ_D Flagellar protein fliT; 41.0 1E+02 0.0012 23.7 4.2 36 130-165 3-38 (123)
68 3KA5_B Ribosome-associated pro 40.8 39 0.00045 24.1 1.8 30 23-53 17-46 (65)
69 5Y9S_D VV2_1132; LysR, TRANSCR 40.7 81 0.00094 25.6 3.7 38 8-50 26-65 (304)
70 6T7O_B Ribosome hibernation pr 39.9 43 0.00049 24.1 1.9 30 23-53 19-48 (67)
71 6NLF_F Ferroxidase; ELECTRON T 39.8 1E+02 0.0012 22.8 3.9 54 94-147 11-64 (158)
72 7STW_E DNA protection during s 39.7 56 0.00065 24.9 2.6 54 94-147 23-76 (185)
73 3SZP_A Transcriptional regulat 39.6 70 0.0008 25.6 3.2 38 8-50 18-57 (291)
74 7BQB_A NF6; de novo designed p 39.6 83 0.00096 25.8 3.6 24 4-27 60-83 (106)
75 5K57_A Protein DDI1 homolog 2; 39.0 1E+02 0.0012 24.0 4.0 49 119-167 13-61 (98)
76 4CMY_B FERRITIN; METAL TRANSPO 38.5 94 0.0011 25.4 3.9 55 93-147 9-63 (203)
77 3GVY_B Bacterioferritin; bacte 37.9 1.1E+02 0.0013 22.7 3.8 54 94-147 11-64 (161)
78 1JGC_A bacterioferritin; Iron 37.7 65 0.00075 23.8 2.6 54 94-147 11-64 (161)
79 2VXX_D STARVATION INDUCED DNA 37.4 54 0.00063 26.1 2.3 54 94-147 33-86 (192)
80 7BPP_A NF5; de novo designed p 37.1 96 0.0011 25.6 3.6 24 4-27 39-62 (109)
81 2HJE_A Autoinducer 2 sensor ki 36.8 1.8E+02 0.002 25.0 5.4 47 120-166 3-49 (221)
82 3MZ1_D Putative transcriptiona 36.7 88 0.001 25.2 3.4 38 8-50 15-54 (300)
83 2D5K_A Dps family protein; FOU 36.1 55 0.00063 24.8 2.1 56 93-148 11-66 (156)
84 2ESN_B probable transcriptiona 36.0 95 0.0011 25.7 3.5 38 8-50 27-66 (310)
85 6XTU_A Lysine export transcrip 35.9 71 0.00082 26.9 2.9 23 8-30 38-61 (310)
86 PF16321.9 ; Ribosom_S30AE_C ; 35.7 49 0.00056 22.1 1.6 30 24-54 22-51 (57)
87 2H98_B HTH-type transcriptiona 35.4 96 0.0011 25.8 3.5 38 8-50 18-57 (313)
88 4J8C_B Hsc70-interacting prote 35.1 60 0.00069 20.1 1.8 23 130-152 3-25 (46)
89 1N1Q_A DPS Protein; four-helix 34.6 47 0.00054 24.9 1.5 55 93-147 12-66 (149)
90 1Z6O_B Ferritin light chain; M 34.2 1E+02 0.0012 26.0 3.5 55 93-147 40-96 (212)
91 7L4S_F Transcriptional regulat 33.6 1.1E+02 0.0013 24.9 3.5 38 8-50 22-61 (304)
92 PF18064.5 ; ParB_C ; Centromer 33.3 1.1E+02 0.0013 20.9 2.9 22 119-140 18-39 (47)
93 PF11242.12 ; DUF2774 ; Protein 33.2 81 0.00094 23.3 2.5 16 8-23 17-32 (64)
94 PF19925.3 ; DUF6388 ; Family o 33.1 89 0.001 24.8 2.8 30 130-159 1-30 (107)
95 7RVB_A Ferritin; Molecular cha 33.0 1.1E+02 0.0013 26.0 3.5 55 93-147 35-91 (230)
96 7YHJ_G Probable HTH-type trans 32.5 1.1E+02 0.0013 25.9 3.5 38 8-50 35-74 (319)
97 5GNA_A Flagellar protein FliT; 31.3 1.4E+02 0.0016 22.0 3.5 36 130-165 2-37 (96)
98 6Z3D_E Ferritin; Ferritin Iron 31.3 1.1E+02 0.0013 25.7 3.3 55 93-147 36-92 (216)
99 3UNO_O Probable bacterioferrit 31.1 1.8E+02 0.0021 22.9 4.3 40 108-147 29-68 (189)
100 6ENI_B Trp operon repressor; L 30.9 98 0.0011 23.6 2.7 28 8-36 68-96 (116)
101 3NO7_A Putative plasmid relate 30.8 1.1E+02 0.0013 22.8 2.9 22 119-140 36-57 (80)
102 2HJQ_A Hypothetical protein yq 30.6 1.5E+02 0.0017 24.0 3.7 34 1-34 63-103 (111)
103 PF01464.24 ; SLT ; Transglycos 30.4 57 0.00066 23.2 1.3 39 104-147 45-83 (129)
104 8A6T_F Electron bifurcating hy 30.3 1.2E+02 0.0013 24.1 3.1 25 3-27 45-69 (170)
105 4G9S_A Goose-type lysozyme; hy 30.0 1.7E+02 0.002 23.1 4.0 29 5-33 51-79 (187)
106 1LKO_A Rubrerythrin all-iron(I 29.9 1.3E+02 0.0015 24.0 3.3 54 94-147 13-66 (191)
107 1TJO_C Iron-rich dpsA-homolog 29.9 64 0.00073 25.4 1.6 54 94-147 34-87 (182)
108 2OH3_A COG1633: Uncharacterize 29.8 1.5E+02 0.0017 22.5 3.5 54 94-147 10-63 (167)
109 2CHP_D METALLOREGULATION DNA-B 29.8 70 0.00081 24.2 1.8 54 94-147 17-70 (153)
110 PF11126.12 ; Phage_DsbA ; Tran 29.8 1.6E+02 0.0019 22.0 3.5 23 6-28 20-42 (67)
111 3R2K_A Bacterioferritin; Bacte 29.4 1.8E+02 0.002 21.4 3.7 40 108-147 25-64 (154)
112 3LYV_C Ribosome-associated fac 29.3 74 0.00085 22.8 1.7 30 23-53 18-47 (66)
113 3OTP_L Lysozyme C; typsin-like 29.3 1.1E+02 0.0013 19.0 2.3 18 16-33 8-25 (44)
114 4M5E_A Uncharacterized protein 28.6 1.4E+02 0.0016 30.0 3.9 32 5-36 226-257 (410)
115 7DMW_A CcpC; CcpC, Complex, Ba 28.3 1.2E+02 0.0014 24.3 2.9 23 8-30 18-41 (293)
116 3H3M_B Flagellar protein FliT; 28.2 1.8E+02 0.0021 22.7 3.8 36 130-165 13-48 (126)
117 PF21488.1 ; YqbF_HeH ; YqbF, H 28.0 82 0.00095 21.3 1.6 23 1-23 6-28 (39)
118 1LB3_A FERRITIN LIGHT CHAIN 1; 27.9 1.3E+02 0.0015 23.7 2.9 54 94-147 16-71 (182)
119 2QQY_A Sigma B operon; dodecam 27.9 1.4E+02 0.0016 21.3 2.9 54 94-147 15-68 (149)
120 7DWN_B Predicted DNA-binding t 27.9 1.2E+02 0.0013 24.7 2.8 38 8-50 20-59 (293)
121 6GW7_A DNA protecting protein 27.8 71 0.00082 23.9 1.4 19 139-157 15-33 (59)
122 8OH5_D NAD-dependent formate d 27.7 1.8E+02 0.002 24.0 3.8 25 3-27 51-75 (178)
123 7W07_A Transcriptional regulat 27.2 1.3E+02 0.0015 24.5 3.0 38 8-50 18-57 (292)
124 3HHG_C Transcriptional regulat 27.0 1.3E+02 0.0015 25.0 2.9 23 8-30 20-43 (306)
125 6G1D_C Hydrogen peroxide-induc 26.8 1.7E+02 0.002 24.4 3.6 38 8-50 27-66 (329)
126 PF05952.16 ; ComX ; Bacillus c 26.6 1.7E+02 0.002 21.1 3.1 22 138-159 2-23 (56)
127 PF16937.9 ; T3SS_HrpK1 ; Type 26.5 3E+02 0.0035 26.0 5.4 55 127-181 7-81 (256)
128 3VNX_A ferritin; 4-helix bundl 26.4 1.4E+02 0.0016 24.3 3.0 54 94-147 44-99 (204)
129 PF19489.3 ; SLT_4 ; Transglyco 26.4 2E+02 0.0023 21.8 3.6 30 5-34 35-64 (184)
130 1IXC_B LysR-type regulatory pr 26.2 1.6E+02 0.0018 24.0 3.3 38 8-50 18-57 (294)
131 PF12518.12 ; DUF3721 ; Protein 26.1 1.3E+02 0.0014 19.9 2.2 15 4-18 3-17 (33)
132 5XX9_C Bacterioferritin; Bacte 25.5 1.9E+02 0.0022 21.5 3.3 55 93-147 10-64 (167)
133 PF03232.17 ; COQ7 ; Ubiquinone 25.2 1.9E+02 0.0022 23.6 3.6 53 94-147 7-62 (175)
134 7P69_E NADH dehydrogenase I su 24.9 2.5E+02 0.0029 21.8 4.0 27 1-27 38-64 (156)
135 PF18253.5 ; HipN ; Hsp70-inter 24.6 1.7E+02 0.0019 17.5 2.4 17 136-152 4-20 (40)
136 6GI4_B Endo-type membrane-boun 23.8 2.7E+02 0.0031 21.8 4.0 29 5-33 23-51 (194)
137 5HJF_D Ferritin, Dps family pr 23.8 77 0.00089 24.8 1.1 54 94-147 36-89 (185)
138 6DXN_B Thiol:disulfide interch 23.6 1.6E+02 0.0018 22.3 2.7 50 1-56 103-162 (192)
139 6CH2_D Flagellar hook-associat 23.3 2.2E+02 0.0026 23.6 3.6 36 130-165 57-92 (179)
140 4X6G_B OxyR; OxyR, peroxide, T 22.9 1.6E+02 0.0019 24.4 2.8 23 8-30 24-47 (316)
141 3BKH_A lytic transglycosylase; 22.9 2.4E+02 0.0028 22.6 3.7 29 6-34 100-128 (268)
142 PF21506.1 ; Knl-2-like_dom ; K 22.3 2.3E+02 0.0026 21.2 3.1 23 4-26 23-48 (54)
143 1F6V_A DNA TRANSPOSITION PROTE 22.0 3.9E+02 0.0045 20.1 4.4 34 1-34 11-45 (91)
144 PF02317.21 ; Octopine_DH ; NAD 21.7 1.7E+02 0.002 23.8 2.7 21 8-28 122-142 (147)
145 PF11387.12 ; DUF2795 ; Protein 21.5 3.1E+02 0.0036 17.8 3.4 27 2-28 7-33 (44)
146 8H3V_S NtcB; transcription act 21.5 1.8E+02 0.0021 23.9 2.8 23 8-30 18-41 (312)
147 4P0G_A Membrane-bound lytic mu 21.4 2.1E+02 0.0025 26.3 3.5 27 5-31 267-293 (435)
148 2F1K_A prephenate dehydrogenas 21.4 8.7E+02 0.01 21.5 7.3 65 100-168 204-268 (279)
149 5KP0_A Flagellar protein FliT, 21.1 3.1E+02 0.0036 22.5 4.0 35 131-165 1-35 (140)
150 3GGO_B Prephenate dehydrogenas 21.1 7.2E+02 0.0083 21.5 6.3 45 121-165 257-301 (314)
151 7VB7_O NADH dehydrogenase [ubi 20.8 2.8E+02 0.0032 23.9 3.9 26 3-28 61-86 (217)
152 2WLU_A DPS-LIKE PEROXIDE RESIS 20.4 1.9E+02 0.0022 23.0 2.6 41 107-147 45-85 (175)
153 3GXR_D Goose-type lysozyme 1; 20.4 3.4E+02 0.0039 21.6 4.0 29 5-33 47-75 (187)
No 1
>PF11860.12 ; Muramidase ; N-acetylmuramidase
Probab=100.00 E-value=1.7e-47 Score=300.87 Aligned_cols=154 Identities=29% Similarity=0.495 Sum_probs=141.5 Template_Neff=9.400
Q ss_pred CHHHHHHHHhhccCCCcCccccCCCCCCCceEEeeHHHHHHHcCCc------h---------hh-cccccCCCCCCCCCC
Q FD01845391_033 18 EVAAIKAVAKTETGSYGSYFKFEGNDDYVPAILFERHHFHKYTNGK------Y---------DQ-FEDISNSVAGGYGAT 81 (184)
Q Consensus 18 e~aaIkAV~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F~r~t~g~------~---------d~-~PdIs~~~~g~Y~~~ 81 (184)
++++|+||..|||.|.| |+ .+|+|+||||+|+|+|++.+. . .. +|+++++.
T Consensus 1 ~~~~i~av~~vEs~g~~-f~-----~~g~~~i~~E~h~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 67 (176)
T Q8HAN2_BPB78/7 1 DTPALQAIIQVETTGSG-FL-----PDGRPRILLERHKVWAATSPAQRVLLGAQDCNPTPGGYATGPDANARG------- 67 (176)
T ss_pred ChHHHHHHHHHhcCCCC-CC-----CCCCeEEeechhhHHHhcChhHHHhccCCCCCCCCCcccCCCCcCCCC-------
Confidence 46789999999999999 98 899999999999999999865 2 23 56666543
Q ss_pred HHHHHHHHH-HHhcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhCHHHHHHHHcCCH
Q FD01845391_033 82 SVQYTKLVK-AYALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKADRVLLHSIRTKDW 160 (184)
Q Consensus 82 ~~qy~RL~~-A~~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~~~L~~aL~~kdW 160 (184)
..+|.+|.+ |..+|+++|++|||||+|||||+||..+||.|+++||++|..+|..||.+|++||+.++.|.++|+.+||
T Consensus 68 ~~~~~~l~~~a~~~~~~~a~~s~SwG~~QimG~n~~~~gy~~~~~~~~~~~~~e~~ql~~~~~~i~~~~~l~~~l~~~~w 147 (176)
T Q8HAN2_BPB78/7 68 AGEWVRFERVAAVTGDEVAAQCCSWGLGQVMGANYATCGFTNAVGLMFASALNERAQLDVMVRFALPQAGLLGALRAHQW 147 (176)
T ss_pred chHHHHHHHHHHHhCHHHHHHHhccCcccccchHHHHcCCCCHHHHHHHHhCCHHHHHHHHHHHHHhccchHHHHHcCCH
Confidence 668999999 9999999999999999999999999999999999999999999999999999999977799999999999
Q ss_pred HHHHHHhcCh--HHhCHHHHHHHHhC
Q FD01845391_033 161 LSFAKRYNGP--RQNGYDLKMERNYN 184 (184)
Q Consensus 161 ~~FAr~YNGp--~~N~YD~Kl~~aY~ 184 (184)
..||+.|||| +.+.||.+|.++|+
T Consensus 148 ~~~a~~yNG~~~~~~~Y~~~l~~~~~ 173 (176)
T Q8HAN2_BPB78/7 148 AAVARIWNGPNFAINQYDTKLSDAYT 173 (176)
T ss_pred HHHHHHHcCchhhhhcHHHHHHHHHH
Confidence 9999999999 57999999999984
No 2
>5NM7_A Peptidoglycan-binding domain 1; peptidoglycan binding domain, lysozyme family, hydrolase; HET: PGE, GLY; 1.72A {Burkholderia}
Probab=100.00 E-value=6.5e-46 Score=287.36 Aligned_cols=176 Identities=37% Similarity=0.665 Sum_probs=155.1 Template_Neff=12.000
Q ss_pred CCCHHHHHHHHHHhCCCHHHHHHHHhhccCCCcCccccCCCCCCCceEEeeHHHHHHHcCCc-----h-hh-cccccCCC
Q FD01845391_033 2 KIDDTDYEEAAKELGCEVAAIKAVAKTETGSYGSYFKFEGNDDYVPAILFERHHFHKYTNGK-----Y-DQ-FEDISNSV 74 (184)
Q Consensus 2 ~lt~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F~r~t~g~-----~-d~-~PdIs~~~ 74 (184)
.+++.++..+++.++++++.+.++..+|+.+.+ |. .++.+.|+||+|.|++++.+. . .. +|.+....
T Consensus 74 ~~~~~~~~~~a~~~~~~~~~~~a~~~~e~~~~~-~~-----~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (266)
T 5NM7_A 74 HLTDADLQRAADRLQVDLAAVRAVNEVESKGAG-FL-----PDGRPVILYERHIMYRQLAAAGLDADALAAKYPALVNSK 147 (266)
T ss_dssp SCCHHHHHHHHHHHTCCHHHHHHHHHHHSCSCS-BC-----TTSSBCEEECHHHHHHHHHHHC---CHHHHHCTTTSCSS
T ss_pred CCCHHHHHHHHHHhCcCHHHHHHHHhhccCCCC-cC-----CCCCEEEEECHHHHHHHHHHcCCCHHHHHHhCchhccCC
Confidence 467788999999999999999999999999999 87 788999999999999988532 0 23 56555444
Q ss_pred CCCCCCCHHHHHHHHHHHhcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhCHHHHHH
Q FD01845391_033 75 AGGYGATSVQYTKLVKAYALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKADRVLLHS 154 (184)
Q Consensus 75 ~g~Y~~~~~qy~RL~~A~~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~~~L~~a 154 (184)
.+.+..+..+|.++.+++.++.++|++++|||.|||||+||..+||.++.+|+++|..++..|+.+|++||+....|..+
T Consensus 148 ~~~~~~~~~~~~~~~~a~~~~~~~a~~~~s~g~~qimg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 227 (266)
T 5NM7_A 148 RGGYAGDAAEYARLASASQISGACALEATSWGAFQIMGFHWKALGYPDVFAFVDAMKVSEAEQLEAFVRFVLADKVMLAA 227 (266)
T ss_dssp CCCCCCTTHHHHHHHHHHHHCHHHHHHTEEETTTTEEGGGGTTTTCSSHHHHHHHHHHCHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHhhCHHHHHHHHcccccccchhHHHHcCCCCHHHHHHHHhcCHHHHHHHHHHHHHhCHHHHHH
Confidence 43334456789999999999999999999999999999999999999999999999999999999999999955889999
Q ss_pred HHcCCHHHHHHHhcCh--HHhCHHHHHHHHh
Q FD01845391_033 155 IRTKDWLSFAKRYNGP--RQNGYDLKMERNY 183 (184)
Q Consensus 155 L~~kdW~~FAr~YNGp--~~N~YD~Kl~~aY 183 (184)
++.+||..|++.|||+ +.+.|+.+|.++|
T Consensus 228 ~~~~~~~~~~~~yng~~~~~~~y~~~~~~~~ 258 (266)
T 5NM7_A 228 LRSKKWAKFAELYNGKAYAENLYDVKLERAF 258 (266)
T ss_dssp HHTTCHHHHHHHHHCTTGGGGTHHHHHHHHH
T ss_pred HHcCCHHHHHHHhcCHHHHhccHHHHHHHHH
Confidence 9999999999999998 5678999999887
No 3
>7RUM_B Endolysin; Endolysin, peptidoglycan hydrolase, bacteriophage, HYDROLASE; HET: GOL; 2.99A {Salmonella phage GEC_vB_GOT}
Probab=100.00 E-value=7.7e-41 Score=261.59 Aligned_cols=173 Identities=38% Similarity=0.620 Sum_probs=148.8 Template_Neff=12.000
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCCcCccccCCCCCCCceEEeeHHHHHHHcCCc-------h-hh-cccccCCCC
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSYGSYFKFEGNDDYVPAILFERHHFHKYTNGK-------Y-DQ-FEDISNSVA 75 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F~r~t~g~-------~-d~-~PdIs~~~~ 75 (184)
+..+...+..+++++..+.++..+++.+.+ +. .++.+.+++|+|.|++.+.+. . .. ++.+.++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~a~~~~es~~~~-~~-----~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (285)
T 7RUM_B 98 EADLVDAARELGVELASMKAVNQVESRGTG-FT-----KTGKIKTLFERHIMYKKVAAKFGQARANALYQLYPTLVNPNS 171 (285)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHSCSCS-BC-----SSSSBCEEECHHHHHHHHHHHHHHHHHHHHHHHCTTTSCSSS
T ss_pred HHHHHHHHHHhCcchHhchhheeEecCCCC-cc-----CCCcEEEEEccchhHHHhhHhhcHHHHHHHHHhCCCCCCCCC
Confidence 445566667888999999999999999988 87 788899999999998888432 1 23 455555665
Q ss_pred CCCCCCHHHHHHHHHHHhcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhCHHHHHHH
Q FD01845391_033 76 GGYGATSVQYTKLVKAYALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKADRVLLHSI 155 (184)
Q Consensus 76 g~Y~~~~~qy~RL~~A~~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~~~L~~aL 155 (184)
..+..+..+|.++.+++.++.++++.++|||.+|+||+||..+||.++.+|+.++..++..|+..+++|+.+...|.+++
T Consensus 172 ~~~~~~~~~~~~~~~a~~~~~~~a~~~~s~g~~qi~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 251 (285)
T 7RUM_B 172 GGYIGGDAELERLQGAIALDEDCAYESASYGLFQIMGFNCQICGYPNAKEMFTDFLTGERAHLLAFVKFIKADANMWKAL 251 (285)
T ss_dssp CCCCCHHHHHHHHHHHHHHCHHHHHHTEEETTTTEEGGGGTTTTCSSHHHHHHHHTTCHHHHHHHHHHHHHHSHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHHcCHHHHHHHHhccchhHHHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhChHHHHHH
Confidence 55555667799999999999999999999999999999999999999999999999999999999999999878898999
Q ss_pred HcCCHHHHHHHhcCh--HHhCHHHHHHHHh
Q FD01845391_033 156 RTKDWLSFAKRYNGP--RQNGYDLKMERNY 183 (184)
Q Consensus 156 ~~kdW~~FAr~YNGp--~~N~YD~Kl~~aY 183 (184)
+.++|..++++|||+ ....|+.++.++|
T Consensus 252 ~~~~~~~~a~~~ng~~~~~~~y~~~~~~~~ 281 (285)
T 7RUM_B 252 KNKNWAEFARRYNGPAYAKNQYDTKLAAAY 281 (285)
T ss_dssp HTTCHHHHHHHHHCGGGTTTTHHHHHHHHH
T ss_pred hCCCHHHHHHHhcChhHHhccHHHHHHHHH
Confidence 999999999999998 4567999998876
No 4
>7Q4T_AAA Endolysin; endolysin, phage lysozyme, muramidase, monomodular, antimicrobial., HYDROLASE; HET: NAG, DGL, PEG, MUB, EDO; 1.27A {Pseudomonas aeruginosa PAO1}
Probab=100.00 E-value=1e-36 Score=237.35 Aligned_cols=177 Identities=42% Similarity=0.731 Sum_probs=0.0 Template_Neff=10.700
Q ss_pred CCCCHHHHHHHHHHhCCCHHHHHHHHhhccCCCcCccccCCCCCCCceEEeeHHHHHHHcCCch---hh-cccccCCCCC
Q FD01845391_033 1 DKIDDTDYEEAAKELGCEVAAIKAVAKTETGSYGSYFKFEGNDDYVPAILFERHHFHKYTNGKY---DQ-FEDISNSVAG 76 (184)
Q Consensus 1 ~~lt~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F~r~t~g~~---d~-~PdIs~~~~g 76 (184)
..+++.++..+|..++++++.|+||..||+.|.| |. .++.|.|+||+|.|++.+. +. +. +|.+++...+
T Consensus 21 ~~~~~~~~~~~a~~~~~~~~~~~a~~~~es~~~~-~~-----~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 93 (206)
T 7Q4T_AAA 21 MALTEQDFQSAADDLGVDVASVKAVTKVESRGSG-FL-----LSGVPKILFERHWMFKLLK-RKLGHDPEINDVCNPKAG 93 (206)
T ss_pred CCCCHHHHHHHHHHhCCCHHHHHHHHHHhcCCCC-Cc-----cCCCceEeecHHHHHHHHh-hhhCCCccccCcCCCCCC
Q ss_pred CCCCCHHHHHHHHHHHhcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhCHHHHHHHH
Q FD01845391_033 77 GYGATSVQYTKLVKAYALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKADRVLLHSIR 156 (184)
Q Consensus 77 ~Y~~~~~qy~RL~~A~~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~~~L~~aL~ 156 (184)
.|.+...+|.++.+|+.+|+++|+.++|||.|||||+||..+||.++.+|+++|..+|..|+.+|++||..++.|.++|+
T Consensus 94 ~~~~~~~~~~~~~~a~~~~~~~a~~~~s~g~~qimg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 173 (206)
T 7Q4T_AAA 94 GYLGGQAEHERLDKAVKMDRDCALQSASWGLFQIMGFHWEALGYASVQAFVNAQYASEGSQLNTFVRFIKINPAIHKALK 173 (206)
T ss_pred CCCCchHHHHHHHHHHccCHHHHHHhcccCccccccccHHHhCCCCHHHHHHHHHcCHHHHHHHHHHHHHHChHHHHHHh
Q ss_pred cCCHHHHHHHhcCh--HHhCHHHHHHHHhC
Q FD01845391_033 157 TKDWLSFAKRYNGP--RQNGYDLKMERNYN 184 (184)
Q Consensus 157 ~kdW~~FAr~YNGp--~~N~YD~Kl~~aY~ 184 (184)
.+||..|++.|||+ ..+.||.+|.++|+
T Consensus 174 ~~~~~~~a~~~nG~~~~~~~y~~~~~~~~~ 203 (206)
T 7Q4T_AAA 174 SKNWAEFAKRYNGPDYKKNNYDVKLAEAYQ 203 (206)
T ss_pred cCCHHHHHHHHcChhHhhccHHHHHHHHHH
No 5
>7QVD_AAA Lytic murein transglycosylase; Lytic transglycosylase, HYDROLASE; 1.7A {Pseudomonas aeruginosa}
Probab=96.77 E-value=0.0025 Score=57.69 Aligned_cols=124 Identities=17% Similarity=0.139 Sum_probs=0.0 Template_Neff=9.100
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCCcCccccCCCCCCCceEEeeHHHHHHHcCCchhhcccccCCCCCCCCCCHHH
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSYGSYFKFEGNDDYVPAILFERHHFHKYTNGKYDQFEDISNSVAGGYGATSVQ 84 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F~r~t~g~~d~~PdIs~~~~g~Y~~~~~q 84 (184)
...+.++.+..||++..|-||..|||.-+. +. .+ .++|..++.-.++ .....-+...-..
T Consensus 79 ~~~l~~~~~~~gv~~~~i~ai~~~Es~~G~-~~-----g~--------~~~~~~l~t~~~~------~~r~~~~~~~l~~ 138 (380)
T 7QVD_AAA 79 DKLLDQVAARYGVDKYTVVAVWGVESDYGR-IF-----GK--------RPLLTSLSTLSCY------GRRQSFFQGEFLA 138 (380)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHchhcc-cc-----CC--------CChhhhhcccccc------ccchHhhhHHHHH
Q ss_pred HHHHHHHHhcCHHHHHHHCC--CcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhC
Q FD01845391_033 85 YTKLVKAYALDKKAALKSAS--WGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKAD 148 (184)
Q Consensus 85 y~RL~~A~~Ld~~AAL~SaS--WG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~ 148 (184)
.-++.+--.+|++.-.-|-. +|..|+|..+|...|...-.+-+..+..+....+.+..+|++.+
T Consensus 139 ~~~~~~~~~~~~~~~~gs~aGa~G~~Qf~p~~~~~~~~d~~~dg~~d~~~~~~d~i~s~a~yl~~~ 204 (380)
T 7QVD_AAA 139 TLKLLQAGDIRDAGITGSWAGAFGHTQFMPSTYARIAVDFDGDGRRDLVGSVPDALGSTANYLKKA 204 (380)
T ss_pred HHHHHHcCCCChhhCCccccHHhcCCccChhHHHHheeCCCCCCCcCCCCCHHhHHHHHHHHHHHc
No 6
>5ANZ_A SOLUBLE LYTIC TRANSGLYCOSYLASE B3; HYDROLASE, LYTIC TRANSGLYCOSILASE, CELL WALL RECYCLING; HET: PEG; 1.614A {PSEUDOMONAS AERUGINOSA}
Probab=96.37 E-value=0.0032 Score=58.01 Aligned_cols=122 Identities=13% Similarity=0.110 Sum_probs=0.0 Template_Neff=8.900
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCCcCccccCCCCCCCceEEeeHHHHHHHcCCchhhcccccCCCCCCCCCCHHH
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSYGSYFKFEGNDDYVPAILFERHHFHKYTNGKYDQFEDISNSVAGGYGATSVQ 84 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F~r~t~g~~d~~PdIs~~~~g~Y~~~~~q 84 (184)
...+.++++..||++..|-||..|||.-+. +. .. .|+|..++.-.++. +...-+...-..
T Consensus 120 ~~~~~~~~~~~gv~~~~i~ai~~~Es~~G~-~~-----g~--------~~~~~~l~~l~~~~------~r~~~~~~~l~~ 179 (420)
T 5ANZ_A 120 ARILGEVDARYAVDADAVVAIWGMESNYGS-HM-----GN--------KNVIRSLATLAYEG------RRPEFAHAQLLA 179 (420)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHTTTT-CS-----CS--------EEHHHHHHHHHHHC------SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHhhhHHHHHccccc-cc-----CC--------CcccccccccccCC------CCHHHHHHHHHH
Q ss_pred HHHHHHHHhcCHHHHHHHCCC----cchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhC
Q FD01845391_033 85 YTKLVKAYALDKKAALKSASW----GKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKAD 148 (184)
Q Consensus 85 y~RL~~A~~Ld~~AAL~SaSW----G~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~ 148 (184)
.-+|.+--.+|+.. ...|| |.+|+|..+|...|...-.+.+..+..+....+.+..+|++.+
T Consensus 180 ~~~~~~~~~~~~~~--~~~s~aGa~G~~Qf~p~~~~~~~~d~~~dg~~d~~~~~~d~i~s~a~yL~~~ 245 (420)
T 5ANZ_A 180 ALKILQHGDVPASF--MIGSWAGAMGQTQFIPTTHNQYAVDFDGDGKRDIWGSPGDALASTANYLKAS 245 (420)
T ss_dssp HHHHHHHTSSCGGG--CEECTTSCBTTTTBCHHHHHHHCCCSSSSSCCCTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCHHH--CcccCChhhcCCccccchHHHHhccCCCCCCcCCCCCHHHHHHHHHHHHHHC
No 7
>PF06871.15 ; TraH_2 ; TraH_2
Probab=87.59 E-value=11 Score=33.02 Aligned_cols=124 Identities=12% Similarity=0.075 Sum_probs=0.0 Template_Neff=7.500
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCCcCccccCCCCCCCceEEeeHHHHHHHcCCchhhcccccCCCCCC-----CC
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSYGSYFKFEGNDDYVPAILFERHHFHKYTNGKYDQFEDISNSVAGG-----YG 79 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F~r~t~g~~d~~PdIs~~~~g~-----Y~ 79 (184)
+..+.+.+...+|+++.|.||+.+||++.. +. ++....+. |.
T Consensus 3 d~ali~~~a~~~v~p~il~ai~~~ES~~~p-~a--------------------------------v~~~~~~~~~l~~~p 49 (206)
T O68015_AGRFC/1 3 DSALIKECSDPGLKPAIVEQFIERAGAPDP-LA--------------------------------VTVRSGNRIVLVPRP 49 (206)
T ss_pred cHHHHHHHhCcCCCHHHHHHHHHHhcCCCc-ee--------------------------------EEccCCCeEEeecCC
Q ss_pred CCHHHHHHHHHHHhcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhCHHHHHHHHcCC
Q FD01845391_033 80 ATSVQYTKLVKAYALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKADRVLLHSIRTKD 159 (184)
Q Consensus 80 ~~~~qy~RL~~A~~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~~~L~~aL~~kd 159 (184)
....+-..+.+-+.-.. ..++|++||+- ..|.....+....+. .-...|..=..++...
T Consensus 50 ~t~~eA~~~~~~~~~~~-----~v~vGlmQi~~----~~g~~~~~~~~~~l~-Dp~~Ni~~G~~~L~~~----------- 108 (206)
T O68015_AGRFC/1 50 TTPDEALALIRQNLGRN-----IVRVGLTQYPA----GLGIVEAGQLKPDLI-EPCENIKMGTALFAKV----------- 108 (206)
T ss_pred CCHHHHHHHHHHHhhcC-----ceEEEcceech----hhCCCccccchhHhh-CHHHHHHHHHHHHHHH-----------
Q ss_pred HHHHHHHhcCh-HHhCHHHHHHHH
Q FD01845391_033 160 WLSFAKRYNGP-RQNGYDLKMERN 182 (184)
Q Consensus 160 W~~FAr~YNGp-~~N~YD~Kl~~a 182 (184)
+..+.+.|..| .+..+...+..|
T Consensus 109 ~~~~~~~~g~~~~~~~~~~~~~~A 132 (206)
T O68015_AGRFC/1 109 YRIVTKWYGNPTESEVLPQVFEDA 132 (206)
T ss_pred HHHHHHhhCCCcccchhhHHHHHH
No 8
>4XP8_A EtgA protein; peptidoglycan hydrolase, hydrolase; HET: MSE; 2.03A {Escherichia coli}
Probab=83.33 E-value=3.6 Score=27.35 Aligned_cols=27 Identities=22% Similarity=0.281 Sum_probs=0.0 Template_Neff=11.600
Q ss_pred HHHHHHHhCCCHHHHHHHHhhccCCCc
Q FD01845391_033 8 YEEAAKELGCEVAAIKAVAKTETGSYG 34 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaIkAV~~VEs~g~G 34 (184)
+.++++..||++..++++...||.+..
T Consensus 4 ~~~~~~~~~v~~~~~~ai~~~Es~~~~ 30 (88)
T 4XP8_A 4 FEITGKAYNIDPLILKAIAWNESKNKN 30 (88)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHhCCCHHHHHHHHHHhhCCCC
No 9
>PF13406.10 ; SLT_2 ; Transglycosylase SLT domain
Probab=79.76 E-value=3.9 Score=37.13 Aligned_cols=122 Identities=11% Similarity=0.102 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCCcCccccCCCCCCCceEEeeHHHHHHHcCCchhhcccccCCCCCCCCCCHHH
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSYGSYFKFEGNDDYVPAILFERHHFHKYTNGKYDQFEDISNSVAGGYGATSVQ 84 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F~r~t~g~~d~~PdIs~~~~g~Y~~~~~q 84 (184)
...+.++++..||++..|.||..|||.-+. .. -..+.+.-++.-.++. .....+...-..
T Consensus 75 ~~~l~~~~~~~gVp~~~l~ai~~~ES~~g~-~~-------------~~~~~~~~l~tl~~~~------~r~~~~~~~l~~ 134 (292)
T A9KCL8_COXBN/3 75 HRILTEIGNKYGVNPCFIVSLWGMETSYGS-YM-------------GNFPVIQSLATLAYES------QRKAFFRKQLFY 134 (292)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHhcccc-cC-------------CCCchhHHHhHhhHHh------hhHHHHHHHHHH
Q ss_pred HHHHHHHHhcCHHHHHHHCCC----cchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhC
Q FD01845391_033 85 YTKLVKAYALDKKAALKSASW----GKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKAD 148 (184)
Q Consensus 85 y~RL~~A~~Ld~~AAL~SaSW----G~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~ 148 (184)
.-++...-.+|+.. ...|| |..|+|-.+|...|-.--.+=......|-...+.+..+|++.+
T Consensus 135 ~l~~~~~~~~~~~~--~~gs~aGA~G~~Qf~P~t~~~~g~d~~~dg~~dl~~~~~dai~s~a~yL~~~ 200 (292)
T A9KCL8_COXBN/3 135 ALEILNGGHVTLQN--FKGEWAGASGQPQFLPSSWHNYAVDYDGDGRKDIWNDLPDAFASIANYLAKH 200 (292)
T ss_pred HHHHHhCCCCChhH--cCCCCCccCCCCCCChhHHHHhhccCCCCCCcCcccCHHHHHHHHHHHHHHC
No 10
>4ANR_A SOLUBLE LYTIC TRANSGLYCOSYLASE B; LYASE, EF-HAND LIKE MOTIF, PEPTIDOGLYCAN; 1.84A {PSEUDOMONAS AERUGINOSA}
Probab=71.99 E-value=2.1 Score=39.71 Aligned_cols=115 Identities=16% Similarity=0.142 Sum_probs=0.0 Template_Neff=7.400
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCCcCccccCCCCCCCceEEeeHHHHHHHcCCchhh-ccccc---------CCC
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSYGSYFKFEGNDDYVPAILFERHHFHKYTNGKYDQ-FEDIS---------NSV 74 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F~r~t~g~~d~-~PdIs---------~~~ 74 (184)
...+.++++..||++..|-||..|||.-+. .. . +|.+. ...
T Consensus 94 ~~~l~~a~~~~gV~~~~iaAI~~~ES~~G~-~~----------------------------g~~~~~~~l~tla~~~~~r 144 (323)
T 4ANR_A 94 AEDLARAEKEYGVPAEIIVSIIGVETFFGR-NT----------------------------GSYRVMDALSTLGFDYPPR 144 (323)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHTTTT-CC----------------------------CSEEHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHCCChhhEEEEeccccccCc-cc----------------------------CCccchhccchhhcCCchh
Q ss_pred CCCCCCCHHHHHHHHHHHhcCHHH--HHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhC
Q FD01845391_033 75 AGGYGATSVQYTKLVKAYALDKKA--ALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKAD 148 (184)
Q Consensus 75 ~g~Y~~~~~qy~RL~~A~~Ld~~A--AL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~ 148 (184)
..-+...-...-+|.+--.+|+.+ ---+-..|..|+|-.+|...|-.--.+=...+..+-...+.+-.+|++.+
T Consensus 145 ~~~~~~el~~~l~~~~~~~~~~~~~~gS~aGA~G~~QfmPst~~~~~~d~dgdg~~Dl~~~~~Dai~s~A~yL~~~ 220 (323)
T 4ANR_A 145 ADFFRKELREFLLLAREQQVDPLSLTGSYAGAMGLPQFMPSSFRAYAVDFDGDGHINIWSDPTDAIGSVASYFKQH 220 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEECTTCCBTTTTBCHHHHHHHCCCSSSSSCCCTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhccCCCCCCCCcCcCChHHHHHHhhhcCCCCCccccCCHHHHHHHHHHHHHHC
No 11
>4HPE_C Putative cell wall hydrolase Tn916-like,CTn1-Orf17; Two domains protein, Slt/lysozyme-like muramidase, NlpC/P60 LD endopeptidase, Structural Genomics, Joint Center for Structural Genomics, JCSG; HET: OCS, MSE, GOL; 2.38A {Clostridium difficile}
Probab=68.72 E-value=14 Score=31.05 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=0.0 Template_Neff=11.400
Q ss_pred HHHHHHHHHHhCCCH--HHHHHHHhhccCCCc
Q FD01845391_033 5 DTDYEEAAKELGCEV--AAIKAVAKTETGSYG 34 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~--aaIkAV~~VEs~g~G 34 (184)
..-+.++++..|+++ ..|.||..+||.|..
T Consensus 28 ~~~~~~~~~~~~v~~~~~~~~ai~~~ES~~~~ 59 (308)
T 4HPE_C 28 QPMVEKYARENGISEYVNVLLAIIQVESGGTA 59 (308)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhcCCCC
No 12
>1LTM_A 36 KDA SOLUBLE LYTIC TRANSGLYCOSYLASE; GLYCOSYLTRANSFERASE, MURAMIDASE, TRANSGLYCOSYLASE, PEPTIDOGLYCAN MATURATION, LYSOZYME, PERIPLASMIC; HET: BCN; 1.7A {Escherichia coli} SCOP: d.2.1.6
Probab=67.88 E-value=21 Score=33.40 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=0.0 Template_Neff=7.400
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCCcCccccCCCCCCCceEEeeHHHHHHHcCCchhh-cccccCCCCCCCCC---
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSYGSYFKFEGNDDYVPAILFERHHFHKYTNGKYDQ-FEDISNSVAGGYGA--- 80 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F~r~t~g~~d~-~PdIs~~~~g~Y~~--- 80 (184)
...+.++++..||++..|-||..|||.-+. .. . +|.|..-..-.|..
T Consensus 97 ~~~l~~~~~~~gV~~~ii~AI~~~ES~~G~-~~----------------------------g~~~~~~~l~tla~~~~~r 147 (320)
T 1LTM_A 97 EDALNRAWQVYGVPPEIIVGIIGVETRWGR-VM----------------------------GKTRILDALATLSFNYPRR 147 (320)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHTTTT-CC----------------------------CCEEHHHHHHHHHHSCGGG
T ss_pred HHHHHHHHHHHCCCHHHHhhhhhhhcchhh-hc----------------------------CCcccccccchhhhCChhH
Q ss_pred ------CHHHHHHHHHHHhcCHHHH--HHHCCCcchhhcHHHHHHcC
Q FD01845391_033 81 ------TSVQYTKLVKAYALDKKAA--LKSASWGKFQILASNFATAG 119 (184)
Q Consensus 81 ------~~~qy~RL~~A~~Ld~~AA--L~SaSWG~FQIMG~N~~~~G 119 (184)
.-...-+|.+-..+|+.+- --+-..|..|+|-.+|...|
T Consensus 148 ~~~~~~el~~~l~~~~~~~~~~~~~~gS~aGA~G~~Qf~Pst~~~~~ 194 (320)
T 1LTM_A 148 AEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYA 194 (320)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTTCEECTTCCBTTTTBCHHHHHHHC
T ss_pred HHhhhhHHHHHHHHHHhcCCChhhhcCCCCCCCCccccChhHHHHHh
No 13
>5J93_A Ferritin, middle subunit; Rana Catesbeiana, ferritin variant, ferroxidase activity, M type, H' type, oxidoreductase activity, iron, Oxidoreductase; HET: CL; 1.1A {Lithobates catesbeiana} SCOP: a.25.1.1
Probab=66.34 E-value=13 Score=28.70 Aligned_cols=54 Identities=11% Similarity=0.217 Sum_probs=0.0 Template_Neff=11.100
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+...+++..+.-.+..++..+.. .|+..+.++...+...|..|...|..++..
T Consensus 17 L~~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~f~~~a~~e~~h~~~~~~~~~~ 72 (176)
T 5J93_A 17 VNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHAEREHAEKFMKYQNK 72 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
No 14
>3PWF_A Rubrerythrin; Non heme iron peroxidases, oxidative stress, rubrerythrin, OXIDOREDUCTASE; 1.64A {Pyrococcus furiosus} SCOP: a.25.1.1, g.41.5.0
Probab=64.83 E-value=21 Score=27.99 Aligned_cols=63 Identities=14% Similarity=0.132 Sum_probs=0.0 Template_Neff=10.500
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhCHHHHHHHH
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKADRVLLHSIR 156 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~~~L~~aL~ 156 (184)
|+.....+..++..++.+.......|+..+.++...+...|..|...+...|.....+.+.|+
T Consensus 11 L~~~~~~E~~~~~~Y~~~a~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~l~~~~~~~~~l~ 73 (170)
T 3PWF_A 11 LEEAFAGESMAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGKLGKTPENLQ 73 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccCCHHHHHH
No 15
>1RCD_A L FERRITIN; IRON STORAGE; 2.0A {Rana catesbeiana} SCOP: a.25.1.1
Probab=64.18 E-value=16 Score=27.69 Aligned_cols=54 Identities=20% Similarity=0.261 Sum_probs=0.0 Template_Neff=11.500
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+...+.+..++-.+..+...+.. .|+..+.++...+...|..|...+.+++..
T Consensus 17 l~~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~f~~~a~~e~~h~~~~~~~~~~ 72 (173)
T 1RCD_A 17 LNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQ 72 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
No 16
>PF01464.24 ; SLT ; Transglycosylase SLT domain
Probab=63.59 E-value=13 Score=26.36 Aligned_cols=26 Identities=19% Similarity=0.146 Sum_probs=0.0 Template_Neff=11.800
Q ss_pred HHHHHHHhCCCHHHHHHHHhhccCCC
Q FD01845391_033 8 YEEAAKELGCEVAAIKAVAKTETGSY 33 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaIkAV~~VEs~g~ 33 (184)
+.++++..|+++..+.+|..+||.+.
T Consensus 3 i~~~~~~~~~~~~~~~ai~~~es~~~ 28 (129)
T YQBO_BACSU/135 3 AIMATKTPMSWLPGLMTIAQHESGGN 28 (129)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHhCCC
No 17
>7XA2_A Ferritin; protein assembly, METAL BINDING PROTEIN; 1.84A {Thermotoga maritima}
Probab=63.42 E-value=31 Score=24.38 Aligned_cols=54 Identities=15% Similarity=0.206 Sum_probs=0.0 Template_Neff=12.600
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-...+..+.-.++-+..++...|+..+.++...+...|..|...+...+..
T Consensus 12 l~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 65 (148)
T 7XA2_A 12 LNDQLNREIYSSYLYLSMATYFDAEGFKGFAHWMKKQAQEELTHAMKFYEYIYE 65 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHH
No 18
>7DIE_E Ferritin; Ferritin, Iron uptake, Iron release., METAL BINDING PROTEIN; HET: FE; 1.9A {Mycoplasma penetrans (strain HF-2)} SCOP: a.25.1.0
Probab=63.37 E-value=26 Score=27.32 Aligned_cols=54 Identities=13% Similarity=0.263 Sum_probs=0.0 Template_Neff=10.900
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCH-HHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSE-KNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE-~~qL~aFv~FI~~ 147 (184)
|+.--+.+..+.-.++.|+..+...|+..+.++...+...| ..|...+..+|..
T Consensus 16 L~~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~f~~~a~~e~~~h~~~l~~~l~~ 70 (179)
T 7DIE_E 16 VSKHYNVELCAANLYFHLATVSKALGYDNVAAFFVKMGSDKQSAHMSRLVKYMMK 70 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHhhHHHHHHHHHHHHHHHHH
No 19
>7PFH_A Ferritin; iron binding protein, METAL BINDING PROTEIN; 1.5A {Synechococcus sp. (strain CC9311)}
Probab=63.31 E-value=27 Score=27.04 Aligned_cols=54 Identities=13% Similarity=0.155 Sum_probs=0.0 Template_Neff=11.200
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+...+.+..++-.+..+...+...|+..+.++.......|..|.+.+..+|..
T Consensus 26 Ln~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~l~~ 79 (182)
T 7PFH_A 26 IQQHISIERYASVTYLAMSIWCAERELAGFYQFFDGEAKDEQSHAVHFTQYLIA 79 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
No 20
>5WPN_A Ferritin; Ferritin, OXIDOREDUCTASE; HET: ZN, PEG, EDO; 1.57A {Chaetopterus variopedatus} SCOP: a.25.1.0
Probab=63.31 E-value=18 Score=27.51 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=0.0 Template_Neff=11.400
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.-.+....+.-.++.++.++.. .|+..+.++...+...|..|...++.+|..
T Consensus 16 ~Ln~~l~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 72 (171)
T 5WPN_A 16 GINKQINLELYASYVYQSMAWFFDRDDIALKGFHKFFKHQSEEEREHAEKLMQYQNK 72 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
No 21
>7VP8_A Ferritin-like diiron domain-containing protein; Ferritin, Ferritin subfamily, Ureaplasma, Mycoplasma, METAL BINDING PROTEIN; 2.002A {Ureaplasma urealyticum} SCOP: l.1.1.1, a.25.1.0
Probab=62.94 E-value=27 Score=26.94 Aligned_cols=55 Identities=11% Similarity=0.070 Sum_probs=0.0 Template_Neff=11.000
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHc-CCCCHHHHHHHHHHCHH-HHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATA-GYASPEDFVFALSKSEK-NQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~-G~~sv~~fV~am~~sE~-~qL~aFv~FI~~ 147 (184)
.|+...+....+.-.+..+...+... |+..+.++...+...|. .|...+..+|..
T Consensus 12 ~L~~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~~~~a~~e~~~h~~~l~~~~~~ 68 (172)
T 7VP8_A 12 VLNAHYNLNLELGSVYAQYAHIADDQFSMPFLAKFINDLSNDKLGVHKDLISEYARK 68 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhHHHHHHHHHHHHHHH
No 22
>1S3Q_J ferritin; Ferroxidase, four helix bundle, iron storage, METAL BINDING PROTEIN; HET: MSE, ZN; 2.1A {Archaeoglobus fulgidus} SCOP: a.25.1.0
Probab=61.93 E-value=29 Score=26.53 Aligned_cols=54 Identities=15% Similarity=0.168 Sum_probs=0.0 Template_Neff=11.300
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+....+.-.++.+...+...|+..+.++...+...|..|...+..+|..
T Consensus 12 L~~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~f~~~a~~e~~~~~~l~~~l~~ 65 (173)
T 1S3Q_J 12 LNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSE 65 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHH
No 23
>4DI0_A Rubrerythrin; SSGCID, seattle structural genomics center for infectious disease, peroxidase, OXIDOREDUCTASE; HET: EDO; 1.9A {Burkholderia pseudomallei} SCOP: a.25.1.1
Probab=61.61 E-value=23 Score=25.90 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=0.0 Template_Neff=11.600
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+...+.+..+...|+.+-.++..+|+....++...+...|..|...+.+.+..
T Consensus 17 l~~~~~~E~~~~~~y~~~a~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 70 (144)
T 4DI0_A 17 LKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEA 70 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHhhhHHHHHHHHHHHH
No 24
>4CVR_A BACTERIOFERRITIN; OXIDOREDUCTASE, ELECTRON TRANSFER; 1.1A {ESCHERICHIA COLI} SCOP: a.25.1.1
Probab=61.07 E-value=23 Score=26.02 Aligned_cols=54 Identities=19% Similarity=0.189 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+.+..+.-.|+.+...+...|+..+..+...+...|..|...|...|..
T Consensus 12 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 65 (159)
T 4CVR_A 12 LNKLLGNELVAINQFFLHARMFKNWGLKRLNDVEYRESIDEMKHADRYIERILF 65 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 25
>8GY1_A Ferritin; Ag+-bound DzFer, METAL BINDING PROTEIN; HET: GOL; 1.9A {Dendrorhynchus}
Probab=59.38 E-value=21 Score=27.14 Aligned_cols=54 Identities=15% Similarity=0.281 Sum_probs=0.0 Template_Neff=11.400
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+....+-..+.-+..++.. .||..+.++...+...|..|...++.+|..
T Consensus 16 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~~~~~l~~ 71 (169)
T 8GY1_A 16 VNKQINMEFYASYVYMSMASHFDRDDVALKGAHEFFLKSSSEEREHAMRLIKFQNQ 71 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
No 26
>2V2P_A FERRITIN LIGHT CHAIN; METAL TRANSPORT, IRON, HAEMIN, APOFERRITIN, IRON STORAGE, METAL-BINDING; HET: GOL; 1.15A {EQUUS CABALLUS} SCOP: a.25.1.1
Probab=59.28 E-value=25 Score=27.23 Aligned_cols=55 Identities=11% Similarity=0.115 Sum_probs=0.0 Template_Neff=11.000
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+...+.+..+--.++.|+..+.. .||..+.+|...+...|..|...+.+++..
T Consensus 15 ~l~~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~f~~~a~~e~~h~~~~~~~l~~ 71 (174)
T 2V2P_A 15 AVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQGAERLLKMQNQ 71 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
No 27
>7O91_C Sulerythrin; sulerythrin, Hydrogen peroxide, molecular oxygen, bi-metallic binding site, OXIDOREDUCTASE; 1.1A {Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)}
Probab=58.67 E-value=27 Score=25.58 Aligned_cols=54 Identities=15% Similarity=0.249 Sum_probs=0.0 Template_Neff=11.600
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+..-..+..+.-.|+.+...+..+|+..+.++...+...|..|...|..++..
T Consensus 15 L~~~~~~E~~~~~~y~~~a~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 68 (146)
T 7O91_C 15 LKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQ 68 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhHHHHHHHHHHHHh
No 28
>4ZTT_E Bacterial non-heme ferritin; Helicobactor pylori, Escherichia coli, Gram-negative bacteria, ferritin, iron uptake, ferroxidase center, reaction intermediate, OXIDOREDUCTASE; HET: GOL; 1.83A {Escherichia coli DH1} SCOP: a.25.1.1, l.1.1.1
Probab=58.65 E-value=42 Score=24.85 Aligned_cols=55 Identities=9% Similarity=0.201 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.....+..+--.++-+..++...||..+.++...+...|..|...+...|..
T Consensus 10 ~L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~e~~h~~~l~~~~~~ 64 (166)
T 4ZTT_E 10 KLNEQMNLELYASLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTD 64 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
No 29
>3QZ3_C Ferritin; structural genomics, The Center for Structural Genomics of Infectious Diseases, CSGID, all alpha ferritin-like, cytoplasmic, OXIDOREDUCTASE; HET: EDO, MSE; 2.099A {Vibrio cholerae O1 biovar El Tor} SCOP: a.25.1.1
Probab=58.44 E-value=37 Score=25.98 Aligned_cols=54 Identities=13% Similarity=0.292 Sum_probs=0.0 Template_Neff=11.600
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+.+..+--.+..+..++...||..+..+...+...|..|.+.+...|..
T Consensus 19 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 72 (184)
T 3QZ3_C 19 LNEQINLEFFSSNLYLQMSAWCEDKGFDGAAEFLRAHAVEEMQHMQRLFTYVSE 72 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHH
No 30
>6TXI_C Ferritin; Metal binding, engineered protein, METAL BINDING PROTEIN; HET: SO4, GOL, LFA; 1.759A {Thermotoga maritima MSB8} SCOP: a.25.1.1
Probab=58.10 E-value=43 Score=24.56 Aligned_cols=54 Identities=17% Similarity=0.221 Sum_probs=0.0 Template_Neff=12.200
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+..-..+..+=-.++.+...+...||..+.++...+...|..|...+...+..
T Consensus 12 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 65 (164)
T 6TXI_C 12 LNDQLNREIYSSYLYLSMATYFDAEGFKGFAHWMKKQAQEELTHAMKFYEYIYA 65 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHH
No 31
>4FDY_B Similar to lipoprotein, NLP/P60 family; Slt/lysozyme-like muramidase, NlpC/P60 LD endopeptidase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative; HET: MSE, OCS; 2.23A {Staphylococcus aureus subsp. aureus}
Probab=57.60 E-value=29 Score=29.33 Aligned_cols=28 Identities=32% Similarity=0.363 Sum_probs=0.0 Template_Neff=11.400
Q ss_pred HHHHHHHHHHhCCCH--HHHHHHHhhccCC
Q FD01845391_033 5 DTDYEEAAKELGCEV--AAIKAVAKTETGS 32 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~--aaIkAV~~VEs~g 32 (184)
...+.++++..||++ ..|.|+..+||.+
T Consensus 30 ~~~i~~~~~~~gv~~~~~~~~ai~~~eS~~ 59 (313)
T 4FDY_B 30 RPLIEKYGKEYGIEDYVSYILAIMQVESGG 59 (313)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCChHHHHHHHHHHHHhcCC
No 32
>6LK9_A Coho salmon ferritin; coho salmon, ferritin, METAL BINDING PROTEIN; 2.099A {Oncorhynchus kisutch} SCOP: a.25.1.0
Probab=57.19 E-value=1e+02 Score=23.52 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=0.0 Template_Neff=11.300
Q ss_pred CCCCCCCHHHHHHHHHHHhcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 75 AGGYGATSVQYTKLVKAYALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 75 ~g~Y~~~~~qy~RL~~A~~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.++......-.+.|..++.....++. .++.++..+.. .|+..+..+...+...|..|...|..+|..
T Consensus 2 ~~~~~~~~~~~~~L~~~l~~e~~~~~------~y~~~a~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~i~~ 70 (171)
T 6LK9_A 2 SVRQNFHQDSEAAINRQINLELYASY------VYLSMAYYFDRDDQALHNFAKFFKNQSHEEREHAEKLMKVQNQ 70 (171)
T ss_dssp TTCCSCCHHHHHHHHHHHHHHHHHHH------HHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHHhHHHHHHH------HHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
No 33
>1KRQ_A ferritin; bacterial non-heme ferritin, H-chain like four-helix bundle, METAL BINDING PROTEIN; 2.7A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=56.96 E-value=43 Score=25.02 Aligned_cols=54 Identities=13% Similarity=0.257 Sum_probs=0.0 Template_Neff=11.800
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-...+-.+--.+..+..++...++..+.++...+...|..|...+..++..
T Consensus 10 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~e~~h~~~l~~~l~~ 63 (167)
T 1KRQ_A 10 LNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLFAHASEESDHAKKLITYLNE 63 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHH
No 34
>6A4U_E Ferritin; ferritin, crustacean, iron, ferroxidase site, nucleation site, METAL BINDING PROTEIN; HET: SO4, EDO; 1.16A {Marsupenaeus japonicus} SCOP: a.25.1.0
Probab=55.94 E-value=27 Score=26.36 Aligned_cols=54 Identities=13% Similarity=0.218 Sum_probs=0.0 Template_Neff=11.600
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+.+..+-..++.+...+.. .||..+.++...+...|..|...+..++..
T Consensus 16 L~~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 71 (169)
T 6A4U_E 16 INKQINMELYASYVYLSMAYYFERDDVALPGFAKFFKESSDEEREHAQTFMKYQNK 71 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
No 35
>3RCO_B Tudor domain-containing protein 7; Structural Genomics, Structural Genomics Consortium, SGC, HLH motif, DNA BINDING PROTEIN; HET: CL; 1.8A {Homo sapiens}
Probab=55.30 E-value=11 Score=27.12 Aligned_cols=18 Identities=17% Similarity=0.442 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred HHHHHcCCCCHHHHHHHH
Q FD01845391_033 113 SNFATAGYASPEDFVFAL 130 (184)
Q Consensus 113 ~N~~~~G~~sv~~fV~am 130 (184)
++++.+||.|+.+|+..|
T Consensus 46 l~~~~~Gf~sl~~~l~~~ 63 (89)
T 3RCO_B 46 IPFKQLGFPTLEAYLRSV 63 (89)
T ss_dssp CCTTTTTCSSHHHHHHTC
T ss_pred CCHHHcCCCCHHHHHHcC
No 36
>3BVK_F Ferritin; iron storage, Metal-binding, Oxidoreductase; HET: FE, GOL; 1.5A {Helicobacter pylori} SCOP: a.25.1.1, l.1.1.1
Probab=55.15 E-value=49 Score=25.54 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=0.0 Template_Neff=11.300
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+...+.+..+.-.++.+..++...||..+.++...+...|..|...+..+|..
T Consensus 24 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 77 (181)
T 3BVK_F 24 LNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNE 77 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHH
No 37
>PF07862.15 ; Nif11 ; Nif11 domain
Probab=54.09 E-value=76 Score=20.23 Aligned_cols=32 Identities=9% Similarity=0.320 Sum_probs=0.0 Template_Neff=9.500
Q ss_pred HHHHHHHHHHHhCHHHHHHHHcCC----H----HHHHHHh
Q FD01845391_033 136 NQLKAFVSFIKADRVLLHSIRTKD----W----LSFAKRY 167 (184)
Q Consensus 136 ~qL~aFv~FI~~~~~L~~aL~~kd----W----~~FAr~Y 167 (184)
.++..|..-+..+|.|...|..-. + ..+|+.+
T Consensus 4 ~~~~~f~~~~~~d~~l~~~l~~~~~~~~~~~~~~~~a~~~ 43 (51)
T B2JAK5_NOSP7/1 4 ENLEQFYVLVQNSEQLQELLGATENTDSFNELAVRLGQDN 43 (51)
T ss_pred HHHHHHHHHHHcCHHHHHHHHcCCCHHHHHHHHHHHHHHh
No 38
>2LH9_A Tudor domain-containing protein 7; RNA binding domain, Ribonucleoprotein, RNA granule component, RNA BINDING PROTEIN; NMR {Mus musculus}
Probab=52.25 E-value=13 Score=25.79 Aligned_cols=18 Identities=22% Similarity=0.491 Sum_probs=0.0 Template_Neff=9.700
Q ss_pred HHHHHcCCCCHHHHHHHH
Q FD01845391_033 113 SNFATAGYASPEDFVFAL 130 (184)
Q Consensus 113 ~N~~~~G~~sv~~fV~am 130 (184)
.+|...||.|+.+|+..|
T Consensus 41 l~~~~~G~~sl~~lL~~~ 58 (78)
T 2LH9_A 41 IPFKQLGYPTLEAYLRSV 58 (78)
T ss_dssp CCHHHHTCSSHHHHHHTC
T ss_pred CCHHHcCCCCHHHHHHcC
No 39
>8SQO_A Bacterioferritin; SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, METAL BINDING PROTEIN; HET: SO4, HEM; 1.55A {Brucella abortus 2308}
Probab=51.82 E-value=44 Score=24.82 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-...+..+.-.+..+...+...|+..+.++...+...|..|...+..++..
T Consensus 15 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~l~~ 68 (165)
T 8SQO_A 15 LNEALLLELGAVNQYWLHYRLLNDWGYTRLAKKEREESIEEMHHADKLIDRIIF 68 (165)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 40
>1YUZ_A Nigerythrin; Rubrythrin, Rubredoxin, Hemerythrin, Electron TRansfer, Diiron Center, OXIDOREDUCTASE; 1.4A {Desulfovibrio vulgaris subsp. vulgaris} SCOP: a.25.1.1, g.41.5.1
Probab=51.51 E-value=35 Score=27.35 Aligned_cols=54 Identities=15% Similarity=0.171 Sum_probs=0.0 Template_Neff=10.800
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.....+..+.-.++.+...+...||..+.++...+...|..|...+.+.+..
T Consensus 33 L~~~~~~E~~~~~~Y~~~a~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 86 (202)
T 1YUZ_A 33 LKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAE 86 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 41
>5GN8_B Ferritin heavy chain; ferritin, nanocage, subunit interface redesign, OXIDOREDUCTASE; 2.805A {Homo sapiens}
Probab=51.51 E-value=30 Score=25.78 Aligned_cols=55 Identities=9% Similarity=0.185 Sum_probs=0.0 Template_Neff=11.200
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+..-+.+-.++-.++.+...+.. .|+..+.++...+...|..|.+.+.+++..
T Consensus 19 ~Ln~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~i~~~l~~ 75 (146)
T 5GN8_B 19 AINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQ 75 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 42
>6B8F_A Ferritin heavy chain; Oxidoreductase, Hydrogel, Polymer; HET: CA; 1.06A {Homo sapiens} SCOP: a.25.1.1
Probab=51.31 E-value=36 Score=26.37 Aligned_cols=54 Identities=7% Similarity=0.174 Sum_probs=0.0 Template_Neff=11.200
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+....+.-.+..+...+.. .||..+.++...+...|..|...+..++..
T Consensus 20 Ln~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~f~~~a~~e~~h~~~l~~~~~~ 75 (182)
T 6B8F_A 20 INRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQ 75 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
No 43
>1JIG_D Dlp-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=50.17 E-value=24 Score=25.90 Aligned_cols=55 Identities=11% Similarity=0.044 Sum_probs=0.0 Template_Neff=11.600
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+..-+....+...|+.+..+...-||..+.++...+...|..|.+.+...|..
T Consensus 9 ~L~~~l~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~~i~~ 63 (146)
T 1JIG_D 9 VLNKQVANWNVLYVKLHNYHWYVTGPHFFTLHEKFEEFYNEAGTYIDELAERILA 63 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 44
>1Z6O_U Ferritin heavy chain; METAL BINDING PROTEIN, Iron storage; HET: FE; 1.91A {Trichoplusia ni} SCOP: a.25.1.0
Probab=50.01 E-value=47 Score=26.42 Aligned_cols=55 Identities=5% Similarity=0.255 Sum_probs=0.0 Template_Neff=10.700
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.-...+..+.-.++.|..++.. .|+..+.+|.......|..|...+..++..
T Consensus 24 ~l~~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 80 (191)
T 1Z6O_U 24 SMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYLLM 80 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHH
No 45
>1NFV_D bacterioferritin; bacterioferritin, 24 subunits in the active molecule, diiron centre, haem Fe-coproporphyrin III cofactor, IRON STORAGE-ELECTRON TRANSPORT; HET: SO4, FE, FEC, GOL; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1
Probab=49.95 E-value=29 Score=26.56 Aligned_cols=54 Identities=15% Similarity=0.170 Sum_probs=0.0 Template_Neff=11.500
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+.+..+.-.|..+..++...||..+.++...+...|..|.+.+.++|..
T Consensus 16 L~~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 69 (179)
T 1NFV_D 16 LNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKE 69 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 46
>PF00210.28 ; Ferritin ; Ferritin-like domain
Probab=49.67 E-value=77 Score=22.16 Aligned_cols=55 Identities=13% Similarity=0.205 Sum_probs=0.0 Template_Neff=12.400
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.--..+..+--.+..+..++...|+..+.++...+...|..|.+.+.+++..
T Consensus 3 ~L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~e~~h~~~l~~~~~~ 57 (135)
T Q185Y2_CLOD6/7 3 LLNEQINHELYSAYLYLSMSSYLEAEGLKGFSNWFYVQYKEETDHAMFFYKYLHN 57 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHH
No 47
>PF14053.10 ; DUF4248 ; Domain of unknown function (DUF4248)
Probab=49.30 E-value=28 Score=25.33 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=0.0 Template_Neff=7.200
Q ss_pred HHHHHHCHHHHH-----------HHHHHHHHhCHHHHHHHHcCCH
Q FD01845391_033 127 VFALSKSEKNQL-----------KAFVSFIKADRVLLHSIRTKDW 160 (184)
Q Consensus 127 V~am~~sE~~qL-----------~aFv~FI~~~~~L~~aL~~kdW 160 (184)
+..+..+|-+++ +.|-+.|+.+|.|.+.|....|
T Consensus 2 ~r~~~k~eLA~~Y~p~~~~~~a~~~l~rwI~~~~~L~~~L~~~gy 46 (68)
T Q8A8J7_BACTN/1 2 YRSYGKGELAMLYIPNVQQQSAVDRFNEWIEAAPGLKERLLSTGM 46 (68)
T ss_pred CccccHHHHHHHHCCCCChHHHHHHHHHHHHhChHHHHHHHHcCC
No 48
>4IWK_D Ferritin; ferritin, 4 helix bundle, iron storage, acetamido-cysteines, TRANSPORT PROTEIN; HET: YCM, FE; 1.65A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1
Probab=48.86 E-value=65 Score=24.53 Aligned_cols=54 Identities=13% Similarity=0.226 Sum_probs=0.0 Template_Neff=11.300
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+..-..+..++-.+..+...+...++..+.++...+...|..|.+.+..+|..
T Consensus 9 Ln~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 62 (168)
T 4IWK_D 9 FNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFANK 62 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
No 49
>5ZND_A Ferritin heavy chain; Ferritin, rHuHF, protein redesign, nanotube, METAL BINDING PROTEIN; 3.0A {Homo sapiens} SCOP: a.25.1.1
Probab=48.21 E-value=37 Score=24.58 Aligned_cols=55 Identities=9% Similarity=0.185 Sum_probs=0.0 Template_Neff=11.500
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+...+.+-.+.=.+..+..++.. .||..+.+|.......|..|...+.+++..
T Consensus 20 ~ln~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~ 76 (134)
T 5ZND_A 20 AINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQ 76 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 50
>PF14071.10 ; YlbD_coat ; Putative coat protein
Probab=47.79 E-value=51 Score=27.35 Aligned_cols=29 Identities=24% Similarity=0.521 Sum_probs=0.0 Template_Neff=5.800
Q ss_pred HHHHHHHHhCHHHHHHHHc--CCHHHHHHHh
Q FD01845391_033 139 KAFVSFIKADRVLLHSIRT--KDWLSFAKRY 167 (184)
Q Consensus 139 ~aFv~FI~~~~~L~~aL~~--kdW~~FAr~Y 167 (184)
..|-.||+.+|.|++..|+ +.|..+=..|
T Consensus 1 eeFK~FVk~hP~Li~~Vr~g~~tWQ~lYE~W 31 (120)
T G2TLB7_WEICA/1 1 EKFKAFTKTHPLILKEVRGGKKSLQDFFEEW 31 (120)
T ss_pred ChHHHHHHHChHHHHHHHcCCCCHHHHHHHH
No 51
>2JD6_1 FERRITIN HOMOLOG; METAL TRANSPORT, IRON, PORES, FERRITIN, ARCHAEON, ENTRY CHANNELS, THERMOSTABILITY, HYPERTHERMOPHILE, FERROXIDASE CENTER; HET: SO4, FE; 2.75A {PYROCOCCUS FURIOSUS} SCOP: a.25.1.0
Probab=47.31 E-value=76 Score=23.89 Aligned_cols=55 Identities=18% Similarity=0.196 Sum_probs=0.0 Template_Neff=11.800
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+..-..+-.+.-.+.-+..++...||..+.++...+...|..|...+..++..
T Consensus 9 ~L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 63 (174)
T 2JD6_1 9 ALNDQLNRELYSAYLYFAMAAYFEDLGLEGFANWMKAQAEEEIGHALRFYNYIYD 63 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHH
No 52
>1JI5_C Dlp-1; dodecamer, four-helix bundle, metal transport; 2.5A {Bacillus anthracis} SCOP: a.25.1.1
Probab=47.20 E-value=27 Score=25.36 Aligned_cols=55 Identities=15% Similarity=0.089 Sum_probs=0.0 Template_Neff=11.700
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.-.+.+..+--.+.-|..+....+|..+.++...+...|..|.+.+.++|..
T Consensus 5 ~L~~~l~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~~l~~ 59 (142)
T 1JI5_C 5 VLNKQVADWSVLFTKLHNFHWYVKGPQFFTLHEKFEELYTESATHIDEIAERILA 59 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 53
>7URH_G Ferritin; Ferroxidase, OXIDOREDUCTASE; HET: MPD; 1.468A {Caenorhabditis elegans}
Probab=47.19 E-value=38 Score=25.61 Aligned_cols=53 Identities=9% Similarity=0.139 Sum_probs=0.0 Template_Neff=11.500
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHH
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIK 146 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~ 146 (184)
|+.--+.+..+.-.++-+...+.. .|+..+.++.......|..|...+..+|.
T Consensus 15 L~~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~f~~~a~~e~~~~~~~~~~~~ 69 (168)
T 7URH_G 15 VNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRVQN 69 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccchHHHHHHHHHHHHHHHHHHHHHHHHH
No 54
>3UOI_S Bacterioferritin; Structural Genomics, TB Structural Genomics Consortium, TBSGC, ferroxidation and iron storage, cytosol, OXIDOREDUCTASE; HET: HEM; 1.9A {Mycobacterium tuberculosis} SCOP: a.25.1.0
Probab=46.96 E-value=49 Score=24.34 Aligned_cols=54 Identities=11% Similarity=0.075 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-...+..+.-.|..+...+..-||..+.++...+...|..|...+...++.
T Consensus 13 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 66 (161)
T 3UOI_S 13 LNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILL 66 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 55
>3FXQ_B LysR type regulator of tsaMBCD; LysR-type, transcriptional regulator, LTTR, TsaR, wHTH, DNA-binding, Transcription, Transcription regulation, Transcription regulator; 1.85A {Comamonas testosteroni}
Probab=46.78 E-value=53 Score=26.70 Aligned_cols=38 Identities=18% Similarity=0.070 Sum_probs=0.0 Template_Neff=12.400
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.|||.+.+| +.|.+.|.. |.--|. ..+++..|
T Consensus 19 ~~~aA~~l~is~~~vs~~i~~LE~~lg~~Lf~-----r~~~~~~l 58 (305)
T 3FXQ_B 19 LRAAAQLLHLSQPALSAAIQQLEDELKAPLLV-----RTKRGVSL 58 (305)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHTSCCEE-----EETTEEEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHCCCcEE-----ecCCceEe
No 56
>5YDW_A Cell density-dependent motility repressor; HOCl, HOCl-specific transcription factor, LysR-type transcription regulator, Hypochlorous acid, hypochlorite, DNA BINDING PROTEIN; 3.3A {Salmonella typhimurium}
Probab=46.33 E-value=49 Score=26.57 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=0.0 Template_Neff=12.700
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.||++..+| +.|.+.|.. |.--|. ..++...|
T Consensus 30 ~~~aA~~l~is~~~vs~~i~~LE~~lg~~Lf~-----R~~~~~~l 69 (304)
T 5YDW_A 30 FSQAAIIRNVSQPAFSRRIRALEHAVGVELFN-----RQVSPLQL 69 (304)
T ss_dssp HHHHHTTTTSCHHHHHHHHHHHHHHTSSCCEE-----CCC--CEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHCCeeEe-----cCCCCcee
No 57
>PF12244.12 ; DUF3606 ; Protein of unknown function (DUF3606)
Probab=44.66 E-value=80 Score=21.42 Aligned_cols=24 Identities=33% Similarity=0.659 Sum_probs=0.0 Template_Neff=7.900
Q ss_pred CHHHHHHHHHHhCCCHHHHHHHHh
Q FD01845391_033 4 DDTDYEEAAKELGCEVAAIKAVAK 27 (184)
Q Consensus 4 t~~d~~~aA~~Lg~e~aaIkAV~~ 27 (184)
.+.++.-.|+.+||++..|+.+..
T Consensus 17 ~~~ev~ywa~k~~vs~~~l~~av~ 40 (53)
T C4LBJ3_TOLAT/5 17 NKSDYRHWCKELGCTDRELAAAVR 40 (53)
T ss_pred CHHHHHHHHHHHCCCHHHHHHHHH
No 58
>7XBE_A LysR family transcriptional regulator; LysR family transcriptional regulator, TRANSCRIPTION; HET: FLC; 1.65A {Staphylococcus aureus}
Probab=44.35 E-value=63 Score=25.95 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=0.0 Template_Neff=12.500
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.||+...+| +.|.+.|.. |.--|. .+++..+|
T Consensus 18 ~~~AA~~l~is~~~vs~~i~~LE~~lg~~Lf~-----r~~~~~~l 57 (288)
T 7XBE_A 18 LRKAAEILYISQPAVTQRLKAIENAFGVDIFI-----RTKKQLIT 57 (288)
T ss_dssp ---------------------------------------------
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHCCccEE-----ecCCcEEE
No 59
>2VZB_A PUTATIVE BACTERIOFERRITIN-RELATED PROTEIN; DPS, DPSL, IRON, FERRITIN, OXIDATIVE STRESS, METAL TRANSPORT; 2.3A {BACTEROIDES FRAGILIS}
Probab=44.30 E-value=58 Score=24.04 Aligned_cols=54 Identities=11% Similarity=0.009 Sum_probs=0.0 Template_Neff=12.200
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+.+..+--.|..+...+...||..+.++...+...|..|...+...|..
T Consensus 22 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 75 (170)
T 2VZB_A 22 LNAALSEEWLAYYQYWVGALVVEGAMRADVQGEFEEHAEEERHHAQLIADRIIE 75 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchHHhHHHHHHHHHHHHHHHHHHHHHHHH
No 60
>2CLB_D DPS-LIKE PROTEIN; DI-IRON CARBOXYLATE, HYPOTHETICAL PROTEIN, BACTERIOFERRITIN, HYDROGEN PEROXIDE, METAL BINDING PROTEIN, DPS, ARCHAEA, DPS- LIKE, OXIDATIVE STRESS; HET: MSE; 2.4A {SULFOLOBUS SOLFATARICUS}
Probab=43.55 E-value=68 Score=24.39 Aligned_cols=54 Identities=11% Similarity=0.090 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+.+..+...++.+..++...|+..+.++...+...|..|.+.+...+..
T Consensus 30 L~~~~~~E~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 83 (188)
T 2CLB_D 30 LVKATAAEFTTYYYYTILRMHLTGMEGEGLKEIAEDARLEDRLHFELMTQRIYE 83 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
No 61
>PF19367.3 ; DUF5943 ; Domain of unknown function (DUF5943)
Probab=42.63 E-value=18 Score=25.99 Aligned_cols=67 Identities=18% Similarity=0.264 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred CCCceEEeeHHHHHHHcCCchhh-cccccCCC--CCCCCCCHHHHHHHHHHHhcCHHHHHHHC-------CCcchhh
Q FD01845391_033 44 DYVPAILFERHHFHKYTNGKYDQ-FEDISNSV--AGGYGATSVQYTKLVKAYALDKKAALKSA-------SWGKFQI 110 (184)
Q Consensus 44 dgrP~ILFErH~F~r~t~g~~d~-~PdIs~~~--~g~Y~~~~~qy~RL~~A~~Ld~~AAL~Sa-------SWG~FQI 110 (184)
.+.|.||+-++.|..+...-.+. .++..... ..+|..+...+..+.+...+|++.+++.. -||.++|
T Consensus 19 ~g~~~v~~~~~~l~~l~~~l~~~~g~~~~~~ily~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GwG~~~i 95 (96)
T G0ACQ5_COLFT/1 19 DKLPMLYVPRHFFTNNHTAVEAALGRDEYAQILYQAGHKSAYFWCEKEAKQHGMSGLDVYQHYLKRLSQRGWGLFSF 95 (96)
T ss_pred CCCceEEEeHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCeeeEe
No 62
>7KE3_K Ferritin heavy chain,Epstein-Barr nuclear antigen 1; Protein nanoparticle, vaccine, virus like particle, OXIDOREDUCTASE; HET: FE, TRS; 2.2A {Homo sapiens}
Probab=41.97 E-value=62 Score=26.44 Aligned_cols=55 Identities=9% Similarity=0.185 Sum_probs=0.0 Template_Neff=10.400
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+..-+.+..+.=.++.|...+.. .||..+.+|...+...|..|...++.+|..
T Consensus 20 ~Ln~~~~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~f~~~a~ee~~h~~~l~~~l~~ 76 (209)
T 7KE3_K 20 AINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQ 76 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
No 63
>4AM5_B BACTERIOFERRITIN; METAL BINDING PROTEIN, FERROXIDASE CENTRE, IRON STORAGE, DI IRON CENTRE, IRON CHANNEL, HEME BINDING; HET: HEM; 1.58A {BLASTOCHLORIS VIRIDIS} SCOP: a.25.1.1
Probab=41.88 E-value=76 Score=23.41 Aligned_cols=55 Identities=16% Similarity=0.071 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.-...+..+...+..+..+...-||..+.++...+...|..|...+.+.|..
T Consensus 10 ~L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~l~~ 64 (159)
T 4AM5_B 10 YLNRGLRSELTAVSQYWLHYRMLEDWGYKDLAKKWRAESIEEMAHADKFVERILF 64 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 64
>3S93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, TRANSCRIPTION; 2.28A {Homo sapiens}
Probab=41.74 E-value=24 Score=26.14 Aligned_cols=18 Identities=22% Similarity=0.432 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred HHHHHcCCCCHHHHHHHH
Q FD01845391_033 113 SNFATAGYASPEDFVFAL 130 (184)
Q Consensus 113 ~N~~~~G~~sv~~fV~am 130 (184)
.+|..+||.|+.+|+.+|
T Consensus 44 lp~~~~G~~sl~~~L~~~ 61 (102)
T 3S93_A 44 LPLRILGYRSTMELVLDM 61 (102)
T ss_dssp CCTGGGTCSSHHHHHHTC
T ss_pred CCHHHcCCCCHHHHHhcC
No 65
>PF04060.17 ; FeS ; Putative Fe-S cluster
Probab=41.23 E-value=20 Score=20.42 Aligned_cols=23 Identities=22% Similarity=0.443 Sum_probs=0.0 Template_Neff=9.900
Q ss_pred HHHHHHcCCCCHHHHHHHHHHCH
Q FD01845391_033 112 ASNFATAGYASPEDFVFALSKSE 134 (184)
Q Consensus 112 G~N~~~~G~~sv~~fV~am~~sE 134 (184)
+.+-..|||.+..+|+.++...+
T Consensus 3 ~~~c~~cg~~~c~~~a~~i~~g~ 25 (33)
T A5HYR7_CLOBH/4 3 GANCGGCGYAGCDAYAQAVAEGA 25 (33)
T ss_pred CCCCcCCCCCcHHHHHHHHHcCC
No 66
>7TBH_T Isoform 2 of CREB-binding protein,Ferritin heavy chain, N-terminally processed; Protein Engineering, Simulation, Peptide Therapeutics, Acute Myeloid Leukemia, STRUCTURAL PROTEIN; HET: SEP; 2.3A {Homo sapiens}
Probab=41.15 E-value=57 Score=27.47 Aligned_cols=55 Identities=9% Similarity=0.198 Sum_probs=0.0 Template_Neff=10.600
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+...+++..+.=.+..|..++.. .||..+.+|...+...|..|...+.++|..
T Consensus 98 ~Ln~~i~~E~~a~~~Y~~~a~~~~~~~~~~~~~~~~f~~~a~ee~~h~~~l~~~~~~ 154 (260)
T 7TBH_T 98 AINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQ 154 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
No 67
>3NKZ_D Flagellar protein fliT; structural genomics, PSI-2, protein structure initiative, MCSG, Midwest Center for Structural Genomics, unknown function; HET: SO4, MSE, PG4; 2.112A {Yersinia enterocolitica subsp. enterocolitica}
Probab=40.99 E-value=1e+02 Score=23.73 Aligned_cols=36 Identities=8% Similarity=0.247 Sum_probs=0.0 Template_Neff=9.300
Q ss_pred HHHCHHHHHHHHHHHHHhCHHHHHHHHcCCHHHHHH
Q FD01845391_033 130 LSKSEKNQLKAFVSFIKADRVLLHSIRTKDWLSFAK 165 (184)
Q Consensus 130 m~~sE~~qL~aFv~FI~~~~~L~~aL~~kdW~~FAr 165 (184)
|......-+..+-.+..-...+..+++..||..|..
T Consensus 3 ~~~~~~~~~~~~~~l~~ls~~~l~~~~~~dwe~l~~ 38 (123)
T 3NKZ_D 3 AMERHQHLLSEYQQILTLSEQMLVLATEGNWDALVD 38 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
No 68
>3KA5_B Ribosome-associated protein Y (PSrp-1); Ribosome-associated protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, CHAPERONE; HET: MSE; 1.8A {Clostridium acetobutylicum}
Probab=40.82 E-value=39 Score=24.08 Aligned_cols=30 Identities=23% Similarity=0.429 Sum_probs=0.0 Template_Neff=7.600
Q ss_pred HHHHhhccCCCcCccccCCCCCCCceEEeeH
Q FD01845391_033 23 KAVAKTETGSYGSYFKFEGNDDYVPAILFER 53 (184)
Q Consensus 23 kAV~~VEs~g~G~F~~~~~~~dgrP~ILFEr 53 (184)
.||.+.|..+.. |+.|.....++..|||-+
T Consensus 17 eAv~~l~~~~~~-f~vF~n~~t~~~~vvyrr 46 (65)
T 3KA5_B 17 EAVLEMELLGHN-FFVFQNGDSNEVNVVYKR 46 (65)
T ss_dssp HHHHHHHHHTCS-EEEEEETTTTEEEEEEEC
T ss_pred HHHHHHHHhCCc-EEEEEeCCCCcEEEEEEc
No 69
>5Y9S_D VV2_1132; LysR, TRANSCRIPTION; 2.199A {Vibrio vulnificus CMCP6}
Probab=40.66 E-value=81 Score=25.57 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=0.0 Template_Neff=12.500
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.||+++.+| +.|.+.|+. |.--|. ..++...|
T Consensus 26 ~~~aA~~l~is~~~vs~~i~~lE~~lg~~Lf~-----r~~~~~~l 65 (304)
T 5Y9S_D 26 FSAAAKARFVTQSAFSRRIQALEVWIGVPLFD-----RTSYPITL 65 (304)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHHSSCCEE-----TTSSSCEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHCCCcEe-----CCCCCeeE
No 70
>6T7O_B Ribosome hibernation promotion factor; HPF, Ribosome, Staphylococcus aureus, Hibernating Promoting Factor, RIBOSOMAL PROTEIN; 1.60003624659A {Staphylococcus aureus (strain NCTC 8325)}
Probab=39.85 E-value=43 Score=24.06 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=0.0 Template_Neff=7.600
Q ss_pred HHHHhhccCCCcCccccCCCCCCCceEEeeH
Q FD01845391_033 23 KAVAKTETGSYGSYFKFEGNDDYVPAILFER 53 (184)
Q Consensus 23 kAV~~VEs~g~G~F~~~~~~~dgrP~ILFEr 53 (184)
.||.+.|..+.. |+.|.....++..|||-+
T Consensus 19 eAi~~l~~~~~~-f~~F~n~~t~~~~Vlyr~ 48 (67)
T 6T7O_B 19 EAVLQMNLLGHD-FFVFTDRETDGTSIVYRR 48 (67)
T ss_dssp HHHHHHHHHTCS-EEEEEBTTTSSEEEEEEC
T ss_pred HHHHHhHhhCCc-EEEEEECCCCcEEEEEEc
No 71
>6NLF_F Ferroxidase; ELECTRON TRANSPORT, IRON STORAGE, IRON BINDING, IRON MOBILIZATION, PROTEIN-PROTEIN INTERACTION, OXIDOREDUCTASE; 1.45A {Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)} SCOP: a.25.1.1
Probab=39.77 E-value=1e+02 Score=22.83 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=0.0 Template_Neff=11.800
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+.+..+.-.+..+...+..-||..+..+...+...|..|...+...|..
T Consensus 11 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 64 (158)
T 6NLF_F 11 LNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILF 64 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 72
>7STW_E DNA protection during starvation protein; DPS-like protein, METAL BINDING PROTEIN; HET: FE, ZN;{Pyrococcus furiosus}
Probab=39.74 E-value=56 Score=24.87 Aligned_cols=54 Identities=19% Similarity=0.190 Sum_probs=0.0 Template_Neff=11.800
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-.+.+..++-.++.+-.+....|+..+.++...+...|..|.+.+...|..
T Consensus 23 L~~~~~~E~~~~~~y~~~a~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 76 (185)
T 7STW_E 23 LIKAAAAEFTTYYYYTILRNHATGLEGEAIKEIIEDARLEDRNHFEALVPRIYE 76 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 73
>3SZP_A Transcriptional regulator, LysR family; winged helix-turn helix, DNA-binding, transcription factor, TRANSCRIPTION; 2.202A {Vibrio cholerae}
Probab=39.62 E-value=70 Score=25.65 Aligned_cols=38 Identities=18% Similarity=0.156 Sum_probs=0.0 Template_Neff=12.600
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.||+...+| +.+.+.|.. |..-|. .+++...|
T Consensus 18 ~~~aA~~l~isq~~vs~~i~~lE~~lg~~Lf~-----r~~~~~~l 57 (291)
T 3SZP_A 18 YTSTSKKTMIPVATITRRIQALEDSLNLRLLN-----RHARKLTL 57 (291)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHTCCCEE-----EETTEEEE
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHCceeee-----cCCCceee
No 74
>7BQB_A NF6; de novo designed protein, DE NOVO PROTEIN; NMR {synthetic construct}
Probab=39.56 E-value=83 Score=25.82 Aligned_cols=24 Identities=21% Similarity=0.488 Sum_probs=0.0 Template_Neff=1.300
Q ss_pred CHHHHHHHHHHhCCCHHHHHHHHh
Q FD01845391_033 4 DDTDYEEAAKELGCEVAAIKAVAK 27 (184)
Q Consensus 4 t~~d~~~aA~~Lg~e~aaIkAV~~ 27 (184)
|++|+.+.|+.+||+...|+-|.+
T Consensus 60 SEEdi~rI~KK~Gi~EEiiRRI~~ 83 (106)
T 7BQB_A 60 SEEELEKILKKLGVDEEIIRRIKR 83 (106)
T ss_dssp SHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHH
No 75
>5K57_A Protein DDI1 homolog 2; Ddi2, hydrolase; NMR {Homo sapiens}
Probab=39.02 E-value=1e+02 Score=24.00 Aligned_cols=49 Identities=10% Similarity=0.015 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred CCCCHHHHHHHHHHCHHHHHHHHHHHHHhCHHHHHHHHcCCHHHHHHHh
Q FD01845391_033 119 GYASPEDFVFALSKSEKNQLKAFVSFIKADRVLLHSIRTKDWLSFAKRY 167 (184)
Q Consensus 119 G~~sv~~fV~am~~sE~~qL~aFv~FI~~~~~L~~aL~~kdW~~FAr~Y 167 (184)
|.......+..|...=...=...-.+...+|.|.+|+...|+..|....
T Consensus 13 ~~~~~~~~~e~~r~~~~~np~~l~~l~~~nP~La~ai~~~d~~~f~~~l 61 (98)
T 5K57_A 13 SSPQGLDNPALLRDMLLANPHELSLLKERNPPLAEALLSGDLEKFSRVL 61 (98)
T ss_dssp CCTTTSSCHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHTCCHHHHHHHH
T ss_pred CCCCcCCCHHHHHHHHHhCHHHHHHHHHhCcHHHHHHHcCCHHHHHHHH
No 76
>4CMY_B FERRITIN; METAL TRANSPORT, IRON-STORAGE PROTEIN, IRON METABOLISM; HET: FE; 2.59A {CHLOROBACULUM TEPIDUM} SCOP: a.25.1.0
Probab=38.54 E-value=94 Score=25.43 Aligned_cols=55 Identities=18% Similarity=0.279 Sum_probs=0.0 Template_Neff=10.200
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.--+++..+=-.+..|...+...|+..+.+|...+...|..|...++++|..
T Consensus 9 ~Ln~~i~~e~~a~~~Y~~~a~~~~~~~~~~~a~~f~~~a~ee~~ha~~l~~~l~~ 63 (203)
T 4CMY_B 9 KLNHQVNFEAASAHLYLQMSAWLLTQSLDSTAAFFRAHAEEEKAHMMKLFDYINE 63 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 77
>3GVY_B Bacterioferritin; bacterioferritin, ferritin, iron storage, di-iron, ferroxidase activity, heme, Metal binding protein; HET: HEM; 2.8A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=37.86 E-value=1.1e+02 Score=22.70 Aligned_cols=54 Identities=11% Similarity=0.004 Sum_probs=0.0 Template_Neff=11.800
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-...+..+--.|+-+...+...||..+..+...+...|..|.+.|...+..
T Consensus 11 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 64 (161)
T 3GVY_B 11 LNAALRSELTAVSQYWLHYRLQEDWGFGSIAHKSRKESIEEMHHADKLIQRIIF 64 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHH
No 78
>1JGC_A bacterioferritin; Iron storage protein, METAL BINDING PROTEIN; HET: HEM; 2.6A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=37.75 E-value=65 Score=23.79 Aligned_cols=54 Identities=11% Similarity=-0.023 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.--..+..+--.|+.+..++..-||..+.++...+...|..|.+.+...+..
T Consensus 11 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 64 (161)
T 1JGC_A 11 LNAALRSELTAISQYWVHFRLQEDWGLAKMAKKSREESIEEMGHADKIIARILF 64 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHchhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 79
>2VXX_D STARVATION INDUCED DNA BINDING PROTEIN; STRESS RESPONSE PROTEIN, DNA-BINDING PROTEIN, DPS, OXIDATION, IRON BINDING, FERROXIDASE CENTRE, DNA BINDING PROTEIN; HET: PEG, PG4; 2.4A {SYNECHOCOCCUS ELONGATUS} SCOP: a.25.1.0
Probab=37.38 E-value=54 Score=26.11 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=0.0 Template_Neff=10.700
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+..-+.+..+.-.+..+..+...-+|..+.+++..|...|..|...+...|..
T Consensus 33 L~~~l~~e~~~~~~y~~~a~~~~~~~~~~l~~~~~~~a~~e~~h~~~l~~~i~~ 86 (192)
T 2VXX_D 33 MNRLLASFQALYLQYQKHHFVVEGAEFYPLHQFFQDCYEQVQDHVHALGERLNG 86 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 80
>7BPP_A NF5; de novo designed protein, DE NOVO PROTEIN; NMR {synthetic construct}
Probab=37.07 E-value=96 Score=25.59 Aligned_cols=24 Identities=17% Similarity=0.340 Sum_probs=0.0 Template_Neff=1.300
Q ss_pred CHHHHHHHHHHhCCCHHHHHHHHh
Q FD01845391_033 4 DDTDYEEAAKELGCEVAAIKAVAK 27 (184)
Q Consensus 4 t~~d~~~aA~~Lg~e~aaIkAV~~ 27 (184)
|++|+.+.|+.+||+...|+-|.+
T Consensus 39 SEEdi~rI~KK~Gi~EEiiRRI~~ 62 (109)
T 7BPP_A 39 SEEDIKRIAKKAGISEELLRRILQ 62 (109)
T ss_dssp SHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHH
No 81
>2HJE_A Autoinducer 2 sensor kinase/phosphatase luxQ; PER/ARNT/SIMPLE-MINDED (PAS) FOLD, AUTOINDUCER-2 (AI-2), QUORUM SENSING, HISTIDINE SENSOR KINASE, SIGNALING PROTEIN; 1.7A {Vibrio harveyi} SCOP: d.110.6.3
Probab=36.76 E-value=1.8e+02 Score=24.95 Aligned_cols=47 Identities=6% Similarity=-0.043 Sum_probs=0.0 Template_Neff=9.200
Q ss_pred CCCHHHHHHHHHHCHHHHHHHHHHHHHhCHHHHHHHHcCCHHHHHHH
Q FD01845391_033 120 YASPEDFVFALSKSEKNQLKAFVSFIKADRVLLHSIRTKDWLSFAKR 166 (184)
Q Consensus 120 ~~sv~~fV~am~~sE~~qL~aFv~FI~~~~~L~~aL~~kdW~~FAr~ 166 (184)
|..-...++.|...+-..|...++.+..++.|.++|.++|...+-..
T Consensus 3 f~q~~~~~~~~~~~~l~~l~~~l~~~a~~~~l~~al~~~d~~~~~~~ 49 (221)
T 2HJE_A 3 KQQTSALIHNIFDSHFAAIQIHHDSNSKSEVIRDFYTDRDTDVLNFF 49 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHhhcCCHHHHHHH
No 82
>3MZ1_D Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative, midwest center for str uctural genomics, MCSG, Midwest Center for; HET: MSE; 1.88A {Sinorhizobium meliloti}
Probab=36.73 E-value=88 Score=25.22 Aligned_cols=38 Identities=11% Similarity=0.092 Sum_probs=0.0 Template_Neff=12.600
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.|++...+| +.|.+.|.. |.--|. ..++...|
T Consensus 15 ~~~aA~~l~is~~avs~~i~~lE~~lg~~Lf~-----r~~~~~~l 54 (300)
T 3MZ1_D 15 FTRASASLNMPKATVTNLIQGLEAHLRTKLLN-----RTTRRVLV 54 (300)
T ss_dssp ---------------------------------------------
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHccceee-----cCCCCeEe
No 83
>2D5K_A Dps family protein; FOUR HELIX BUNDLE, METAL BINDING PROTEIN; HET: GOL; 1.85A {Staphylococcus aureus subsp. aureus} SCOP: a.25.1.0, l.1.1.1
Probab=36.08 E-value=55 Score=24.79 Aligned_cols=56 Identities=13% Similarity=0.052 Sum_probs=0.0 Template_Neff=11.100
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhC
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKAD 148 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~ 148 (184)
.|+.--+..-.+.-.++....+....+|.++.++...+...+..|.+.+...|...
T Consensus 11 ~L~~~l~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~~l 66 (156)
T 2D5K_A 11 ELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAV 66 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
No 84
>2ESN_B probable transcriptional regulator; PA0477, APC5828, transcription, regulator, PSI, protein structure initiative, MCSG, Midwest Center for Structural Genomics, STRUCTURAL GENOMICS; 2.1A {Pseudomonas aeruginosa} SCOP: a.4.5.37, c.94.1.1
Probab=35.98 E-value=95 Score=25.73 Aligned_cols=38 Identities=18% Similarity=0.168 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.||++..+| +.+.+.|.. |.--|. ..++...|
T Consensus 27 ~~~AA~~L~is~~~~s~~i~~lE~~lg~~Lf~-----r~~~~~~l 66 (310)
T 2ESN_B 27 VGTAASELAISASAFSHALGRLRQGLDDELFL-----RQGNRMQP 66 (310)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHTSCCEE-----EETTEEEE
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhhCCccEE-----EeCCccee
No 85
>6XTU_A Lysine export transcriptional regulatory protein LysG; LTTR HELIX-TURN-HELIX TRANSCRIPTION REGULATION, TRANSCRIPTION; 2.52A {Corynebacterium glutamicum MB001}
Probab=35.90 E-value=71 Score=26.90 Aligned_cols=23 Identities=26% Similarity=0.336 Sum_probs=0.0 Template_Neff=11.500
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhcc
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTET 30 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs 30 (184)
+++||+.|||+.++| +.+.+.|+
T Consensus 38 ~~~AA~~L~is~~avs~~i~~lE~ 61 (310)
T 6XTU_A 38 FEGASLALSISPSAVSQRVKALEH 61 (310)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHH
No 86
>PF16321.9 ; Ribosom_S30AE_C ; Sigma 54 modulation/S30EA ribosomal protein C terminus
Probab=35.69 E-value=49 Score=22.12 Aligned_cols=30 Identities=13% Similarity=0.335 Sum_probs=0.0 Template_Neff=8.900
Q ss_pred HHHhhccCCCcCccccCCCCCCCceEEeeHH
Q FD01845391_033 24 AVAKTETGSYGSYFKFEGNDDYVPAILFERH 54 (184)
Q Consensus 24 AV~~VEs~g~G~F~~~~~~~dgrP~ILFErH 54 (184)
|+.+.+..+.. |..|.....++..|||-+.
T Consensus 22 A~~~l~~~~~~-f~~F~~~~~~~~~vlyr~~ 51 (57)
T Q8RCC0_CALS4/1 22 AILQMNLLGHT-FFVFTNAETDMINVVYKRK 51 (57)
T ss_pred HHHHHHhhCCc-EEEEEeCCCCeEEEEEEcC
No 87
>2H98_B HTH-type transcriptional regulator catM; CatM, BenM, LTTR, Transcriptional regulator, Acinetobacter, TRANSCRIPTION; 1.8A {Acinetobacter sp.}
Probab=35.37 E-value=96 Score=25.76 Aligned_cols=38 Identities=18% Similarity=0.274 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.|++...+| +.|.++|.. |.--|. .++++.+|
T Consensus 18 ~~~aA~~l~~s~s~vs~~i~~lE~~lg~~Lf~-----r~~~~~~l 57 (313)
T 2H98_B 18 ISKAAEKLCIAQPPLSRQIQKLEEELGIQLFE-----RGFRPAKV 57 (313)
T ss_dssp ---------------------------------------------
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHCCccee-----cCCCCcee
No 88
>4J8C_B Hsc70-interacting protein; alpha helical dimer, Co-chaperone, cytosol, CHAPERONE; 1.1A {Rattus norvegicus}
Probab=35.09 E-value=60 Score=20.07 Aligned_cols=23 Identities=26% Similarity=0.520 Sum_probs=0.0 Template_Neff=9.700
Q ss_pred HHHCHHHHHHHHHHHHHhCHHHH
Q FD01845391_033 130 LSKSEKNQLKAFVSFIKADRVLL 152 (184)
Q Consensus 130 m~~sE~~qL~aFv~FI~~~~~L~ 152 (184)
|..+.-.+|..|+..++.+|.++
T Consensus 3 ~~~~~~~~l~~~v~~~~~~p~~l 25 (46)
T 4J8C_B 3 MDPRKVSELRAFVKMCRQDPSVL 25 (46)
T ss_dssp CCHHHHHHHHHHHHHHHHCGGGG
T ss_pred CCHHHHHHHHHHHHHHhcCHHHh
No 89
>1N1Q_A DPS Protein; four-helix bundle, UNKNOWN FUNCTION; HET: FEO; 2.2A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=34.58 E-value=47 Score=24.85 Aligned_cols=55 Identities=9% Similarity=0.092 Sum_probs=0.0 Template_Neff=11.200
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.-.+..-.+.-.++....|...-+|.+..++...+...+..|.+.+...|..
T Consensus 12 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~~ 66 (149)
T 1N1Q_A 12 LLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLS 66 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhhHHHHHHHHH
No 90
>1Z6O_B Ferritin light chain; METAL BINDING PROTEIN, Iron storage; HET: FE; 1.91A {Trichoplusia ni} SCOP: a.25.1.1
Probab=34.16 E-value=1e+02 Score=26.04 Aligned_cols=55 Identities=15% Similarity=0.121 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.-..++-.+.=.+..|...+.. .|+..+..|...+...|..|...+++||..
T Consensus 40 ~Ln~~i~~e~~~~~~Y~~~a~~~~~~~~~~~~~~~~f~~~a~~e~~h~~~l~~~l~~ 96 (212)
T 1Z6O_B 40 ELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTIDIIKHVTK 96 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHHHHHHHHHHH
No 91
>7L4S_F Transcriptional regulator of oxidative stress OxyR; OxyR, DNA BINDING PROTEIN; 2.4A {Shewanella oneidensis}
Probab=33.61 E-value=1.1e+02 Score=24.91 Aligned_cols=38 Identities=13% Similarity=0.073 Sum_probs=0.0 Template_Neff=12.400
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.|++...+| +.+.+.|+. |.--|. .+++...|
T Consensus 22 ~~~aA~~l~~s~~~vs~~i~~LE~~lg~~Lf~-----r~~~~~~l 61 (304)
T 7L4S_F 22 FNRAAKVCFVSQSTLSSGIQNLEEQLGHQLIE-----RDHKSFMF 61 (304)
T ss_dssp ---------------------------------------------
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHCCceEE-----ecCCceEE
No 92
>PF18064.5 ; ParB_C ; Centromere-binding protein ParB C-terminal
Probab=33.29 E-value=1.1e+02 Score=20.93 Aligned_cols=22 Identities=14% Similarity=0.385 Sum_probs=0.0 Template_Neff=6.700
Q ss_pred CCCCHHHHHHHHHHCHHHHHHH
Q FD01845391_033 119 GYASPEDFVFALSKSEKNQLKA 140 (184)
Q Consensus 119 G~~sv~~fV~am~~sE~~qL~a 140 (184)
|+.|..+||......+..+|..
T Consensus 18 ~~~s~s~~v~~ai~~~~~~lE~ 39 (47)
T M7MPF0_9MICC/1 18 GYQTMSEYAAAAIDALNDHMEQ 39 (47)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
No 93
>PF11242.12 ; DUF2774 ; Protein of unknown function (DUF2774)
Probab=33.18 E-value=81 Score=23.34 Aligned_cols=16 Identities=25% Similarity=0.436 Sum_probs=0.0 Template_Neff=5.900
Q ss_pred HHHHHHHhCCCHHHHH
Q FD01845391_033 8 YEEAAKELGCEVAAIK 23 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaIk 23 (184)
+.++|+.|||+.++|.
T Consensus 17 ~~EIA~~LGiS~~tV~ 32 (64)
T D4Z9X8_BPAR1/5 17 FIEIARELNLQAKEVA 32 (64)
T ss_pred HHHHHHHhCCCHHHHH
No 94
>PF19925.3 ; DUF6388 ; Family of unknown function (DUF6388)
Probab=33.09 E-value=89 Score=24.84 Aligned_cols=30 Identities=17% Similarity=0.153 Sum_probs=0.0 Template_Neff=7.100
Q ss_pred HHHCHHHHHHHHHHHHHhCHHHHHHHHcCC
Q FD01845391_033 130 LSKSEKNQLKAFVSFIKADRVLLHSIRTKD 159 (184)
Q Consensus 130 m~~sE~~qL~aFv~FI~~~~~L~~aL~~kd 159 (184)
|...+..+-.+--+|+.+||.|...|.+.+
T Consensus 1 M~~~~e~~~~A~~rFl~~nP~l~~~i~~~~ 30 (107)
T A0A1I5AM61_9GA 1 MKTTAEYYVIARQLFLQAYPQLAAEINALN 30 (107)
T ss_pred CCCHHHHHHHHHHHHHHHCHHHHHHHHhCC
No 95
>7RVB_A Ferritin; Molecular chaperone Artemin is a homolog of apoferritin, CHAPERONE; 2.04A {Artemia franciscana}
Probab=32.97 E-value=1.1e+02 Score=25.99 Aligned_cols=55 Identities=11% Similarity=0.024 Sum_probs=0.0 Template_Neff=9.700
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.-...+-.+--.++.|..++.. .|+..+.+|...+...|..|...+++|+..
T Consensus 35 ~Ln~~i~~e~~a~~~yl~~a~~~~~~~~~~~~~~~~f~~~a~ee~~ha~~l~~~~~~ 91 (230)
T 7RVB_A 35 AFVEHIHLELASSYHAWSMWAFYARDCKAAVGMTRLCEWASHVSAQRARRMAAYVLT 91 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccCCchhHHHHHHHHHHHHHHHHHHHHHHHH
No 96
>7YHJ_G Probable HTH-type transcriptional regulator LrhA; Transcriptional regulator, TRANSCRIPTION; HET: SO4; 3.237A {Escherichia coli}
Probab=32.52 E-value=1.1e+02 Score=25.93 Aligned_cols=38 Identities=13% Similarity=0.118 Sum_probs=0.0 Template_Neff=11.500
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.||+...+| +.+.+.|.. |..-|. ..++...|
T Consensus 35 ~~~AA~~L~is~~~~s~~i~~lE~~lg~~Lf~-----r~~~~~~l 74 (319)
T 7YHJ_G 35 FAAAAAAVCRTQSAVSQQMQRLEQLVGKELFA-----RHGRNKLL 74 (319)
T ss_dssp ---------------------------------------------
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHCCceEE-----ecCCCeee
No 97
>5GNA_A Flagellar protein FliT; flagellin assembly related protein, GENE REGULATION; 2.3A {Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)}
Probab=31.34 E-value=1.4e+02 Score=22.03 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=0.0 Template_Neff=9.100
Q ss_pred HHHCHHHHHHHHHHHHHhCHHHHHHHHcCCHHHHHH
Q FD01845391_033 130 LSKSEKNQLKAFVSFIKADRVLLHSIRTKDWLSFAK 165 (184)
Q Consensus 130 m~~sE~~qL~aFv~FI~~~~~L~~aL~~kdW~~FAr 165 (184)
|......-+..+-..+.-...|+.+-+..||..|..
T Consensus 2 ~~~~~~~~~~~~~~l~~lt~~ml~~A~~~dWd~l~~ 37 (96)
T 5GNA_A 2 SMTSTVEFINRWQRIALLSQSLLELAQRGEWDLLLQ 37 (96)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
No 98
>6Z3D_E Ferritin; Ferritin Iron storage protein, METAL BINDING PROTEIN; HET: ACT; 1.7A {Mus musculus} SCOP: a.25.1.1
Probab=31.26 E-value=1.1e+02 Score=25.70 Aligned_cols=55 Identities=13% Similarity=0.192 Sum_probs=0.0 Template_Neff=9.700
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+..-+.+-.+.-.+.-+..++.. .||..+.+|...+...|..|...+.+||..
T Consensus 36 ~Ln~~i~~E~~~~~~Y~~~a~~~~~~~~~~~~~~~~f~~~a~ee~~h~~~l~~~l~~ 92 (216)
T 6Z3D_E 36 AVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQND 92 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
No 99
>3UNO_O Probable bacterioferritin BfrB; ferritin, ferroxidase activity, iron storage, OXIDOREDUCTASE, Structural Genomics, TB Structural Genomics Consortium, TBSGC; 2.503A {Mycobacterium tuberculosis}
Probab=31.13 E-value=1.8e+02 Score=22.91 Aligned_cols=40 Identities=13% Similarity=0.257 Sum_probs=0.0 Template_Neff=11.000
Q ss_pred hhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 108 FQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 108 FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
++.+..++...|+..+.++...+...|..|.+.+.++|..
T Consensus 29 y~~~a~~~~~~~~~~~~~~f~~~a~~e~~h~~~l~~~l~~ 68 (189)
T 3UNO_O 29 YVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLD 68 (189)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
No 100
>6ENI_B Trp operon repressor; Ligand Binding, TRANSCRIPTION; HET: EDO, IAC; 1.1A {Escherichia coli} SCOP: a.4.12.1
Probab=30.85 E-value=98 Score=23.56 Aligned_cols=28 Identities=21% Similarity=0.266 Sum_probs=0.0 Template_Neff=9.300
Q ss_pred HHHHHHHhCCCHHHHH-HHHhhccCCCcCc
Q FD01845391_033 8 YEEAAKELGCEVAAIK-AVAKTETGSYGSY 36 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaIk-AV~~VEs~g~G~F 36 (184)
..++|+.|||+++.|- .+...|..|.+ |
T Consensus 68 q~eiA~~l~vs~~tVsr~~~~le~~~~~-~ 96 (116)
T 6ENI_B 68 QRELKNELGAGIATITRGSNYLKAAPVE-L 96 (116)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHSCHH-H
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhCCHH-H
No 101
>3NO7_A Putative plasmid related protein; Ribbon-helix-helix, DNA BINDING PROTEIN; HET: SO4; 1.4A {Leifsonia xyli subsp. cynodontis}
Probab=30.77 E-value=1.1e+02 Score=22.76 Aligned_cols=22 Identities=23% Similarity=0.295 Sum_probs=0.0 Template_Neff=7.500
Q ss_pred CCCCHHHHHHHHHHCHHHHHHH
Q FD01845391_033 119 GYASPEDFVFALSKSEKNQLKA 140 (184)
Q Consensus 119 G~~sv~~fV~am~~sE~~qL~a 140 (184)
|+.|+.+||++....+..+|..
T Consensus 36 ~~~S~s~fv~~Ai~~~~~~le~ 57 (80)
T 3NO7_A 36 GHRTFSGFIAAALDAEVQRLEQ 57 (80)
T ss_dssp TCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
No 102
>2HJQ_A Hypothetical protein yqbF; two-domain, Bsu26130, YqbF, NESG, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium; NMR {Bacillus subtilis} SCOP: a.140.3.2, d.344.1.1, l.1.1.1
Probab=30.59 E-value=1.5e+02 Score=23.99 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=0.0 Template_Neff=6.700
Q ss_pred CCCCHHHHHHHHHHhCCCHH-------HHHHHHhhccCCCc
Q FD01845391_033 1 DKIDDTDYEEAAKELGCEVA-------AIKAVAKTETGSYG 34 (184)
Q Consensus 1 ~~lt~~d~~~aA~~Lg~e~a-------aIkAV~~VEs~g~G 34 (184)
..||-++..+.|+.+|++++ -|.+|.+.|....|
T Consensus 63 ~km~~~Elk~~a~~~gId~~~~~kk~e~Ia~I~~~~~~~~~ 103 (111)
T 2HJQ_A 63 KGMNKAEHESIISNLGRNPSDFKNADERIAYILKQIDNKGE 103 (111)
T ss_dssp HTCCHHHHHHHHHHHTCCTTSCCSHHHHHHHHHHHHTTCCC
T ss_pred hcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhcccc
No 103
>PF01464.24 ; SLT ; Transglycosylase SLT domain
Probab=30.40 E-value=57 Score=23.19 Aligned_cols=39 Identities=21% Similarity=0.223 Sum_probs=0.0 Template_Neff=11.800
Q ss_pred CCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 104 SWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 104 SWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
++|.+||+...+...++. ...-..+-..++.+...+++.
T Consensus 45 ~~G~~q~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~ 83 (129)
T YQBO_BACSU/135 45 SQGLMQTIPSTFNAHKLP-----GMNNILNPIHNAAAAIGYIKS 83 (129)
T ss_pred CccceeeCcchhHhcCCC-----CCCCCCCHHHHHHHHHHHHHH
No 104
>8A6T_F Electron bifurcating hydrogenase subunit HydC; flavin-based electron bifurcating hydrogenase, Fe-Fe hydrogenase, NAD(p), FMN, ELECTRON TRANSPORT; HET: NAP, FES, FMN, HC1, SF4;{Thermoanaerobacter kivui}
Probab=30.31 E-value=1.2e+02 Score=24.08 Aligned_cols=25 Identities=20% Similarity=0.139 Sum_probs=0.0 Template_Neff=10.300
Q ss_pred CCHHHHHHHHHHhCCCHHHHHHHHh
Q FD01845391_033 3 IDDTDYEEAAKELGCEVAAIKAVAK 27 (184)
Q Consensus 3 lt~~d~~~aA~~Lg~e~aaIkAV~~ 27 (184)
|+++.+..+|+.||++++.|..|..
T Consensus 45 i~~~~~~~ia~~~~~~~~~v~~~~~ 69 (170)
T 8A6T_F 45 LPEDVIFYIASKTGIPASKIYGVAT 69 (170)
T ss_dssp CCHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCHHHHcchhh
No 105
>4G9S_A Goose-type lysozyme; hydrolase inhibitor, lysozyme, HYDROLASE-HYDROLASE INHIBITOR complex; HET: FLC; 0.95A {Salmo salar} SCOP: d.2.1.5, l.1.1.1
Probab=30.04 E-value=1.7e+02 Score=23.13 Aligned_cols=29 Identities=14% Similarity=0.146 Sum_probs=0.0 Template_Neff=10.800
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCC
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSY 33 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~ 33 (184)
...+.++++..|+++..|.++...||.+.
T Consensus 51 ~~~~~~~~~~~~~~~~~~~a~~~~es~~~ 79 (187)
T 4G9S_A 51 KELITRVGQKHGLDPAIIAGIISRESRAG 79 (187)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHhhcCCCC
No 106
>1LKO_A Rubrerythrin all-iron(II) form; Rubrerythrin, reduced form, diiron, four-helix bundle, rubredoxin-like, ELECTRON TRANSPORT; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1, g.41.5.1
Probab=29.94 E-value=1.3e+02 Score=23.98 Aligned_cols=54 Identities=13% Similarity=0.266 Sum_probs=0.0 Template_Neff=10.700
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+..-+.+..+.-.++.+.......|+....++...+...|..|...+...+..
T Consensus 13 L~~~~~~E~~~~~~y~~~a~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 66 (191)
T 1LKO_A 13 ILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLEG 66 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
No 107
>1TJO_C Iron-rich dpsA-homolog protein; DpsA, ferritin, low-iron, METAL BINDING PROTEIN; HET: SO4; 1.6A {Halobacterium salinarum} SCOP: a.25.1.1
Probab=29.92 E-value=64 Score=25.40 Aligned_cols=54 Identities=11% Similarity=0.090 Sum_probs=0.0 Template_Neff=10.800
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.--+.+..+.=.++.+-.+....+|..+.+++..+...|..|.+.+...|..
T Consensus 34 Ln~~l~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~~i~~ 87 (182)
T 1TJO_C 34 LNADLANVYVLYHQLKKHHWNVEGAEFRDLHLFLGEAAETAEEVADELAERVQA 87 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 108
>2OH3_A COG1633: Uncharacterized conserved protein; Rubrerythrin, ZP_00055496.1, COG1633: Uncharacterized conserved protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure; HET: PGE, MSE; 2.0A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=29.85 E-value=1.5e+02 Score=22.51 Aligned_cols=54 Identities=11% Similarity=0.075 Sum_probs=0.0 Template_Neff=11.400
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.....+..+-..|.-+...+..++...+..+...|...|..|.+.+..++..
T Consensus 10 L~~~~~~E~~~~~~Y~~~~~~~~~~~~~~~~~~~~~la~~e~~h~~~l~~~~~~ 63 (167)
T 2OH3_A 10 LAHAIALETEAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRA 63 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 109
>2CHP_D METALLOREGULATION DNA-BINDING STRESS PROTEIN; DNA-BINDING PROTEIN, DPS, DODECAMERIC, FERRITIN, DNA-BINDING, STRESS PROTEIN, DNA BINDING PROTEIN; HET: PO4; 2.0A {BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168} SCOP: a.25.1.0
Probab=29.79 E-value=70 Score=24.21 Aligned_cols=54 Identities=7% Similarity=0.018 Sum_probs=0.0 Template_Neff=11.000
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.--+..-.+.=.++....|....+|..+.++...+...|..|.+.+...|..
T Consensus 17 L~~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~h~~~l~e~i~~ 70 (153)
T 2CHP_D 17 LNTQLSNWFLLYSKLHRFHWYVKGPHFFTLHEKFEELYDHAAETVDTIAERLLA 70 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 110
>PF11126.12 ; Phage_DsbA ; Transcriptional regulator DsbA
Probab=29.75 E-value=1.6e+02 Score=21.97 Aligned_cols=23 Identities=17% Similarity=0.107 Sum_probs=0.0 Template_Neff=6.000
Q ss_pred HHHHHHHHHhCCCHHHHHHHHhh
Q FD01845391_033 6 TDYEEAAKELGCEVAAIKAVAKT 28 (184)
Q Consensus 6 ~d~~~aA~~Lg~e~aaIkAV~~V 28 (184)
+.+.++++.|||++..++-++++
T Consensus 20 e~~~~~~eEl~i~~k~~nK~~k~ 42 (67)
T DSBA_BPT4/22-8 20 DIRIRAKDELGVDGKMFNRLLAL 42 (67)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHH
No 111
>3R2K_A Bacterioferritin; Bacterial Ferritin, iron binding, iron storage, iron homeostasis, iron release, iron mobilization, METAL BINDING PROTEIN; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0
Probab=29.42 E-value=1.8e+02 Score=21.37 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred hhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 108 FQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 108 FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
++.+..++...+|..+.++...+...|..|.+.+..+|..
T Consensus 25 y~~~~~~~~~~~~~~~~~~~~~la~~e~~h~~~l~~~~~~ 64 (154)
T 3R2K_A 25 YFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILL 64 (154)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 112
>3LYV_C Ribosome-associated factor Y; ribosomal protein S30Ae family, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, CHAPERONE; HET: MSE; 2.7A {Streptococcus pyogenes}
Probab=29.31 E-value=74 Score=22.78 Aligned_cols=30 Identities=23% Similarity=0.390 Sum_probs=0.0 Template_Neff=7.600
Q ss_pred HHHHhhccCCCcCccccCCCCCCCceEEeeH
Q FD01845391_033 23 KAVAKTETGSYGSYFKFEGNDDYVPAILFER 53 (184)
Q Consensus 23 kAV~~VEs~g~G~F~~~~~~~dgrP~ILFEr 53 (184)
.||.+.+..+.. |+.|.....++..|||-+
T Consensus 18 EAv~~l~~~~~~-f~vF~n~~t~~~~vlyr~ 47 (66)
T 3LYV_C 18 EARLQMELLGHD-FFIYTDSEDGATNILYRR 47 (66)
T ss_dssp HHHHHHHHTTCS-EEEEEETTTCCEEEEEEC
T ss_pred HHHHHHHHhCCc-EEEEEECCCCcEEEEEEC
No 113
>3OTP_L Lysozyme C; typsin-like protease domain PDZ domains, protease, HYDROLASE; 3.76A {Escherichia coli}
Probab=29.26 E-value=1.1e+02 Score=18.99 Aligned_cols=18 Identities=22% Similarity=0.200 Sum_probs=0.0 Template_Neff=9.300
Q ss_pred CCCHHHHHHHHhhccCCC
Q FD01845391_033 16 GCEVAAIKAVAKTETGSY 33 (184)
Q Consensus 16 g~e~aaIkAV~~VEs~g~ 33 (184)
++++..+.+|+.+||...
T Consensus 8 ~~~~~~~~~ia~~eS~~~ 25 (44)
T 3OTP_L 8 GYSLGNWVSAAKFESNFN 25 (44)
T ss_pred CCCHHHHHHHHHHHcCCC
No 114
>4M5E_A Uncharacterized protein; toxin, lysozyme fold, Hydrolase, persiplasm; HET: GOL; 1.49A {Pseudomonas aeruginosa}
Probab=28.61 E-value=1.4e+02 Score=30.00 Aligned_cols=32 Identities=16% Similarity=0.047 Sum_probs=0.0 Template_Neff=5.500
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCCcCc
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSYGSY 36 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G~F 36 (184)
.+.|.++|+..||++..|.||.-+|..+...|
T Consensus 226 ~~~I~kaA~~ygIDP~LLaAIIf~E~~r~S~f 257 (410)
T 4M5E_A 226 AKVMSAAARKYDLTPQLIGAIILAEQRDQTRD 257 (410)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHccCCCc
No 115
>7DMW_A CcpC; CcpC, Complex, Bacillus amyloliquefaciens, Transcriptional regulator, citrate, TRANSCRIPTION; HET: FLC; 2.29A {Bacillus velezensis FZB42}
Probab=28.31 E-value=1.2e+02 Score=24.29 Aligned_cols=23 Identities=22% Similarity=0.241 Sum_probs=0.0 Template_Neff=12.700
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhcc
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTET 30 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs 30 (184)
+++||+.|+|...+| +.|.+.|+
T Consensus 18 ~~~aA~~l~is~~~vs~~i~~LE~ 41 (293)
T 7DMW_A 18 MRKAAERLFVSQPALSQRLQTIEK 41 (293)
T ss_dssp ------------------------
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHH
No 116
>3H3M_B Flagellar protein FliT; structural genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, Flagellum; HET: MSE; 2.5A {Bordetella bronchiseptica}
Probab=28.17 E-value=1.8e+02 Score=22.75 Aligned_cols=36 Identities=8% Similarity=0.169 Sum_probs=0.0 Template_Neff=8.900
Q ss_pred HHHCHHHHHHHHHHHHHhCHHHHHHHHcCCHHHHHH
Q FD01845391_033 130 LSKSEKNQLKAFVSFIKADRVLLHSIRTKDWLSFAK 165 (184)
Q Consensus 130 m~~sE~~qL~aFv~FI~~~~~L~~aL~~kdW~~FAr 165 (184)
|..+...-+..+..+..-...|..+++..||..|..
T Consensus 13 ~~~~~~~~~~~~~~l~~lt~~ml~~a~~~dWe~~~~ 48 (126)
T 3H3M_B 13 ALTQHAPVLEIYQDIANLTSRMLAAANASNWDLVLN 48 (126)
T ss_dssp ------CTHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
No 117
>PF21488.1 ; YqbF_HeH ; YqbF, HeH motif
Probab=27.99 E-value=82 Score=21.28 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=0.0 Template_Neff=5.400
Q ss_pred CCCCHHHHHHHHHHhCCCHHHHH
Q FD01845391_033 1 DKIDDTDYEEAAKELGCEVAAIK 23 (184)
Q Consensus 1 ~~lt~~d~~~aA~~Lg~e~aaIk 23 (184)
..+|..++.+.|..+|+++...+
T Consensus 6 ~~mtk~el~~~A~~~gid~~~~k 28 (39)
T A0A061P976_9BA 6 RSMNKAEQEAIIEQLGGDPSETK 28 (39)
T ss_pred HhCCHHHHHHHHHHhCCChhhCC
No 118
>1LB3_A FERRITIN LIGHT CHAIN 1; IRON STORAGE, METAL BINDING PROTEIN; HET: SO4, GOL; 1.21A {Mus musculus} SCOP: a.25.1.1
Probab=27.87 E-value=1.3e+02 Score=23.68 Aligned_cols=54 Identities=11% Similarity=0.181 Sum_probs=0.0 Template_Neff=10.900
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+..-+.+..+=-.++.+...+.. .|+..+.+|...+...|..|...+.+++..
T Consensus 16 L~~~i~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~f~~~a~~e~~h~~~l~~~l~~ 71 (182)
T 1LB3_A 16 VNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQND 71 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccCcCchHHHHHHHHHHHHHHHHHHHHHHHHHH
No 119
>2QQY_A Sigma B operon; dodecameric alpha-helical, ferritin fold, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG; HET: MSE; 2.0A {Bacillus anthracis str.}
Probab=27.87 E-value=1.4e+02 Score=21.29 Aligned_cols=54 Identities=13% Similarity=0.014 Sum_probs=0.0 Template_Neff=12.400
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+.-...+..+--.|+.+...+...|+..+..+...+...|..|.+.|..++..
T Consensus 15 L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 68 (149)
T 2QQY_A 15 LNEDLAGEYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKT 68 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
No 120
>7DWN_B Predicted DNA-binding transcriptional regulator; transcriptional regulators, tetramer, DNA BINDING PROTEIN; HET: MES; 2.32A {Aliivibrio fischeri ES114}
Probab=27.87 E-value=1.2e+02 Score=24.72 Aligned_cols=38 Identities=16% Similarity=0.078 Sum_probs=0.0 Template_Neff=12.300
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.|++...+| +.+.+.|.. |.--|. ..++..+|
T Consensus 20 ~~~aA~~l~is~s~vs~~i~~LE~~lg~~Lf~-----r~~~~~~l 59 (293)
T 7DWN_B 20 FSQAAELRNVTQPAFSRRIRLLEDTVGAELVD-----RKSKPIEL 59 (293)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHTSCCEE-----TTSSSCEE
T ss_pred HHHHHHHcCCChhHHHHHHHHHHHHhCCeeEe-----cCCCCCcc
No 121
>6GW7_A DNA protecting protein DprA; Winged Helix, DNA BINDING PROTEIN, DprA, Helicobacter pylori; NMR {Helicobacter pylori}
Probab=27.82 E-value=71 Score=23.92 Aligned_cols=19 Identities=5% Similarity=0.158 Sum_probs=0.0 Template_Neff=4.100
Q ss_pred HHHHHHHHhCHHHHHHHHc
Q FD01845391_033 139 KAFVSFIKADRVLLHSIRT 157 (184)
Q Consensus 139 ~aFv~FI~~~~~L~~aL~~ 157 (184)
+.|..|++.+|.+-+||+.
T Consensus 15 DefLeFCk~nPsyEEAl~k 33 (59)
T 6GW7_A 15 DEFLEYCAKNPSYEEAYLK 33 (59)
T ss_dssp HHHHHHTTCCSCHHHHHHT
T ss_pred CHHHHHHhhCCCHHHHHHH
No 122
>8OH5_D NAD-dependent formate dehydrogenase gamma subunit; flavin based Electron-bifurcation, transhydrogenases, anaerobic metabolism, ELECTRON TRANSPORT; HET: FES, FMN, NAD, SF4, FAD, NDP; 3.0A {Sporomusa ovata DSM 2662}
Probab=27.66 E-value=1.8e+02 Score=24.00 Aligned_cols=25 Identities=16% Similarity=0.126 Sum_probs=0.0 Template_Neff=9.300
Q ss_pred CCHHHHHHHHHHhCCCHHHHHHHHh
Q FD01845391_033 3 IDDTDYEEAAKELGCEVAAIKAVAK 27 (184)
Q Consensus 3 lt~~d~~~aA~~Lg~e~aaIkAV~~ 27 (184)
|+++.+..+|+.||++++.|..|+.
T Consensus 51 i~~~~~~~ia~~l~i~~~~v~~v~s 75 (178)
T 8OH5_D 51 LPLAALQAIADNTDNKRAKIYGIAT 75 (178)
T ss_dssp CCHHHHHHHHSSSCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHHH
No 123
>7W07_A Transcriptional regulator, LysR family; LTTR, ITCR, itaconate, TRANSCRIPTION; 1.48A {Yersinia pseudotuberculosis serotype O:3 (strain YPIII)}
Probab=27.19 E-value=1.3e+02 Score=24.45 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=0.0 Template_Neff=12.200
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.|++.+.+| +.|.+.|.. |.--|. ..+++.+|
T Consensus 18 ~~~aA~~l~~s~~~vs~~i~~le~~lg~~Lf~-----r~~~~~~l 57 (292)
T 7W07_A 18 FTRAAARLGIGQPPLSQQIKDLERELGALLFR-----RVSYGAEL 57 (292)
T ss_dssp ---------------------------------------------
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHCCeeEE-----ecCCceee
No 124
>3HHG_C Transcriptional regulator, LysR family; Neisseria meningitidis, transcription factor, LysR, Structural Genomics, Oxford Protein Production Facility, OPPF, DNA-binding, Transcription, Transcription regulation; 3.2A {Neisseria meningitidis serogroup B}
Probab=27.01 E-value=1.3e+02 Score=24.98 Aligned_cols=23 Identities=26% Similarity=0.453 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhcc
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTET 30 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs 30 (184)
+++||+.||++..+| +.|.+.|.
T Consensus 20 ~~~aA~~l~is~~~ls~~i~~LE~ 43 (306)
T 3HHG_C 20 FSRAAEQLAMANSAVSRIVKRLEE 43 (306)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHH
No 125
>6G1D_C Hydrogen peroxide-inducible genes activator; Hydrogen peroxide, redox, transcription factor, LysR, TRANSCRIPTION; HET: PEG, SO4, EDO; 1.992A {Corynebacterium glutamicum}
Probab=26.82 E-value=1.7e+02 Score=24.45 Aligned_cols=38 Identities=21% Similarity=0.234 Sum_probs=0.0 Template_Neff=12.100
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+++||+.|++...+| +.|.+.|.. |.--|. ..++...|
T Consensus 27 ~~~aA~~l~is~~~is~~i~~lE~~lg~~Lf~-----r~~~~~~l 66 (329)
T 6G1D_C 27 FGTAATKLSISQPSLSQALVALETGLGVQLIE-----RSTRKVIV 66 (329)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHTCCCEE-----CCTTSCEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHCCccEE-----cCCCceee
No 126
>PF05952.16 ; ComX ; Bacillus competence pheromone ComX
Probab=26.60 E-value=1.7e+02 Score=21.10 Aligned_cols=22 Identities=23% Similarity=0.333 Sum_probs=0.0 Template_Neff=6.000
Q ss_pred HHHHHHHHHhCHHHHHHHHcCC
Q FD01845391_033 138 LKAFVSFIKADRVLLHSIRTKD 159 (184)
Q Consensus 138 L~aFv~FI~~~~~L~~aL~~kd 159 (184)
|..++.|+..||.+++.|++..
T Consensus 2 mkeiI~~L~~npe~~~~~~~G~ 23 (56)
T A0A0A5I474_9BA 2 LQTVVEKLVESPDLLKQVREGN 23 (56)
T ss_pred hHHHHHHHHhCHHHHHHHHhCC
No 127
>PF16937.9 ; T3SS_HrpK1 ; Type III secretion system translocator protein, HrpF
Probab=26.47 E-value=3e+02 Score=25.97 Aligned_cols=55 Identities=9% Similarity=0.171 Sum_probs=0.0 Template_Neff=5.700
Q ss_pred HHHHHHCH-----HHHHHHHHHHHHhCHHHHHHHH------------cCCHHHHHHHhcCh---HHhCHHHHHHH
Q FD01845391_033 127 VFALSKSE-----KNQLKAFVSFIKADRVLLHSIR------------TKDWLSFAKRYNGP---RQNGYDLKMER 181 (184)
Q Consensus 127 V~am~~sE-----~~qL~aFv~FI~~~~~L~~aL~------------~kdW~~FAr~YNGp---~~N~YD~Kl~~ 181 (184)
...|...- ..+|+.-.+||.+||.|..+|. .+|-..|++...-. +...|..-+.+
T Consensus 7 aa~~~~~~~dp~t~pd~r~A~~fl~~NPaL~~alDt~~~gk~DG~It~~dl~~F~k~~~~~~~~A~~~~~~y~k~ 81 (256)
T E5APL2_MYCRK/1 7 AVQILSGKVDGATDEMKQAALQYVNDNPSLQSALQRTGALKSDGTVDQGKMGDFLNSVHKNLEQADNNIQEYMKK 81 (256)
T ss_pred HHHHHhCCCCCCCchHHHHHHHHHHhCHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHhHHHHhhhHHHHHHH
No 128
>3VNX_A ferritin; 4-helix bundle, Iron storage, OXIDOREDUCTASE; 2.4A {Ulva pertusa} SCOP: a.25.1.0
Probab=26.41 E-value=1.4e+02 Score=24.33 Aligned_cols=54 Identities=15% Similarity=0.254 Sum_probs=0.0 Template_Neff=10.400
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHH--cCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFAT--AGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~--~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+...+.+-.+-=.+..+...+.. .|+..+.++...+...|..|...+++++..
T Consensus 44 ln~~i~~e~~~~~~y~~~a~~~~~~~~~~~~~~~~f~~~a~~e~~h~~~l~~~l~~ 99 (204)
T 3VNX_A 44 INEQINIEYTISYVYHALHSYFARDNVGLPGFAKFFKEASDEEREHAHMLMDYQTK 99 (204)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 129
>PF19489.3 ; SLT_4 ; Transglycosylase SLT domain
Probab=26.39 E-value=2e+02 Score=21.84 Aligned_cols=30 Identities=20% Similarity=0.133 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCCc
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSYG 34 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G 34 (184)
...+.++++..|+++..+.++..+||.+..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~ai~~~es~~~~ 64 (184)
T A0A2Z2NZM7_9GA 35 HKAAREAEKKWGAPMYIPMAIIYQESTFRA 64 (184)
T ss_pred HHHHHHHHHHHCCCcHHHHHHHHHHhccCc
No 130
>1IXC_B LysR-type regulatory protein; Long alpha helix connecting DNA binding and regulatory domains, DNA BINDING PROTEIN; HET: MSE; 2.2A {Cupriavidus necator} SCOP: a.4.5.37, c.94.1.1
Probab=26.24 E-value=1.6e+02 Score=23.97 Aligned_cols=38 Identities=18% Similarity=0.051 Sum_probs=0.0 Template_Neff=12.300
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhccC-CCcCccccCCCCCCCceEE
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTETG-SYGSYFKFEGNDDYVPAIL 50 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs~-g~G~F~~~~~~~dgrP~IL 50 (184)
+.+||+.||+...+| +.|.+.|.. |.--|. ..+++..|
T Consensus 18 ~~~aa~~l~is~~~~s~~i~~lE~~~g~~Lf~-----r~~~~~~l 57 (294)
T 1IXC_B 18 MAAAAKRLHVSQPPITRQMQALEADLGVVLLE-----RSHRGIEL 57 (294)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHTSCCEE-----EETTEEEE
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHCCeeEE-----ecCCceEE
No 131
>PF12518.12 ; DUF3721 ; Protein of unknown function
Probab=26.10 E-value=1.3e+02 Score=19.86 Aligned_cols=15 Identities=47% Similarity=0.656 Sum_probs=0.0 Template_Neff=5.000
Q ss_pred CHHHHHHHHHHhCCC
Q FD01845391_033 4 DDTDYEEAAKELGCE 18 (184)
Q Consensus 4 t~~d~~~aA~~Lg~e 18 (184)
|.++-.++|+.|||+
T Consensus 3 t~~eA~~~A~~lGC~ 17 (33)
T A5GLK4_SYNPW/1 3 TRELAEEQAKSLGCK 17 (33)
T ss_pred CHHHHHHHHHHhCCC
No 132
>5XX9_C Bacterioferritin; Bacterioferritin, METAL TRANSPORT; HET: FE2; 2.6A {Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)} SCOP: a.25.1.0
Probab=25.48 E-value=1.9e+02 Score=21.54 Aligned_cols=55 Identities=13% Similarity=0.119 Sum_probs=0.0 Template_Neff=11.900
Q ss_pred hcCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 93 ALDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 93 ~Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.|+.-...+..+--.|+-+-..+...||..+.++...+...|..|.+.|..+|..
T Consensus 10 ~L~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~~~~~a~~e~~h~~~l~~~~~~ 64 (167)
T 5XX9_C 10 FLNEQLTAELTAINQYFLHAKLQDHKGWTKLAKYTRAESFDEMRHAEVLTDRILL 64 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 133
>PF03232.17 ; COQ7 ; Ubiquinone biosynthesis protein COQ7
Probab=25.17 E-value=1.9e+02 Score=23.64 Aligned_cols=53 Identities=13% Similarity=0.094 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCC-HH--HHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYAS-PE--DFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~s-v~--~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+...+.+..+...+..+..... -++.+ .. +++..|...|..|.+.|.+.|..
T Consensus 7 L~~~~~~E~~a~~~Y~~~~~~~~-~~~~~~~~~~~~l~~~~~~E~~H~~~l~~~i~~ 62 (175)
T I4Y9G5_WALMC/7 7 IRVDHAGELGANCIYAGQMYATK-KAGPGRSDEIELVQHMWDQEKHHLSTFNKLIDD 62 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCCCCccchHHHHHHHHHHHHHHHHHHHHHHHH
No 134
>7P69_E NADH dehydrogenase I subunit E; Complex I, NADH, Quinone, PROTON TRANSPORT; HET: 3PE, FMN, SF4, NAI, LFA;{Escherichia coli BL21(DE3)}
Probab=24.86 E-value=2.5e+02 Score=21.83 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=0.0 Template_Neff=10.400
Q ss_pred CCCCHHHHHHHHHHhCCCHHHHHHHHh
Q FD01845391_033 1 DKIDDTDYEEAAKELGCEVAAIKAVAK 27 (184)
Q Consensus 1 ~~lt~~d~~~aA~~Lg~e~aaIkAV~~ 27 (184)
..++++.+..+|+.+|++++.|..|+.
T Consensus 38 g~i~~~~~~~ia~~~~~~~~~v~~~~~ 64 (156)
T 7P69_E 38 GWVPDGAIHAIADVLGIPASDVEGVAT 64 (156)
T ss_dssp SSCCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCHHHHhHHHH
No 135
>PF18253.5 ; HipN ; Hsp70-interacting protein N N-terminal domain
Probab=24.61 E-value=1.7e+02 Score=17.46 Aligned_cols=17 Identities=29% Similarity=0.462 Sum_probs=0.0 Template_Neff=9.700
Q ss_pred HHHHHHHHHHHhCHHHH
Q FD01845391_033 136 NQLKAFVSFIKADRVLL 152 (184)
Q Consensus 136 ~qL~aFv~FI~~~~~L~ 152 (184)
..|..|+.+++.+|.+.
T Consensus 4 ~~l~~~v~~~~~~p~~~ 20 (40)
T E3LYJ4_CAERE/2 4 SLLKQFVGMCQTNPGVL 20 (40)
T ss_pred HHHHHHHHHHHhCHHHh
No 136
>6GI4_B Endo-type membrane-bound lytic murein transglycosylase A; Lytic Transglycosylase, LYASE; 1.35A {Escherichia coli}
Probab=23.77 E-value=2.7e+02 Score=21.83 Aligned_cols=29 Identities=21% Similarity=0.240 Sum_probs=0.0 Template_Neff=11.300
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCC
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSY 33 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~ 33 (184)
...+.+.++..|+++..+.++..+||.+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~a~~~~es~~~ 51 (194)
T 6GI4_B 23 MPISQKAGAAWGVDPQLITAIIAIESGGN 51 (194)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHcCCC
No 137
>5HJF_D Ferritin, Dps family protein; metal binding protein, ferredoxin, oxidative stress; 1.59A {Nostoc punctiforme} SCOP: a.25.1.0, l.1.1.1
Probab=23.76 E-value=77 Score=24.75 Aligned_cols=54 Identities=9% Similarity=0.048 Sum_probs=0.0 Template_Neff=11.100
Q ss_pred cCHHHHHHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 94 LDKKAALKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 94 Ld~~AAL~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
|+..-+.+..++-.++-.-.++...+|.++.++...+...|..|.+.+...|..
T Consensus 36 L~~~l~~e~~~~~~y~~~a~~~~~~~~~~l~~~l~~~a~~e~~h~~~l~~~i~~ 89 (185)
T 5HJF_D 36 FNVVLASFQALYLQYQKHHFVVEGSEFYSLHEFFNESYNQVQDHIHEIGERLDG 89 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 138
>6DXN_B Thiol:disulfide interchange protein; Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, DsbA oxidoreductase, Oxidoreductases., OXIDOREDUCTASE; HET: MSE, PGE; 1.95A {Klebsiella pneumoniae} SCOP: c.47.1.0, l.1.1.1
Probab=23.56 E-value=1.6e+02 Score=22.27 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=0.0 Template_Neff=12.200
Q ss_pred CCCCHHHHHHHHHHhCCCHHHHHH----------HHhhccCCCcCccccCCCCCCCceEEeeHHHH
Q FD01845391_033 1 DKIDDTDYEEAAKELGCEVAAIKA----------VAKTETGSYGSYFKFEGNDDYVPAILFERHHF 56 (184)
Q Consensus 1 ~~lt~~d~~~aA~~Lg~e~aaIkA----------V~~VEs~g~G~F~~~~~~~dgrP~ILFErH~F 56 (184)
...+++.+.+.++.+|++...+.. +......... +. -.+.|+|++..+.+
T Consensus 103 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----i~~~Pt~~i~g~~~ 162 (192)
T 6DXN_B 103 DIKTAADIVKVFNQLGITSEKYAEMQSNFMVKALIARQDNLVEK-MK-----VHGTPSFYVSGKYH 162 (192)
T ss_dssp CCCSHHHHHHHHHHHTCCHHHHHHHHTCHHHHHHHHHHHHHHHH-TT-----CCSSSEEEETTTEE
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHHhCHhHHHHHHHHHHHHHh-hC-----CCCCCEEEECCEEe
No 139
>6CH2_D Flagellar hook-associated protein 2,Flagellar protein FliT; flagellar, STRUCTURAL PROTEIN; HET: GOL; 2.7A {Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)}
Probab=23.33 E-value=2.2e+02 Score=23.60 Aligned_cols=36 Identities=11% Similarity=0.137 Sum_probs=0.0 Template_Neff=9.100
Q ss_pred HHHCHHHHHHHHHHHHHhCHHHHHHHHcCCHHHHHH
Q FD01845391_033 130 LSKSEKNQLKAFVSFIKADRVLLHSIRTKDWLSFAK 165 (184)
Q Consensus 130 m~~sE~~qL~aFv~FI~~~~~L~~aL~~kdW~~FAr 165 (184)
|......-+..+-....-...|+.+.+..||..|..
T Consensus 57 ~~~~~~~~~~~~~~ll~lt~~ml~~a~~~dWd~l~~ 92 (179)
T 6CH2_D 57 GMTSTVEFINRWQRIALLSQSLLELAQRGEWDLLLQ 92 (179)
T ss_dssp --CTTHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
No 140
>4X6G_B OxyR; OxyR, peroxide, Transcription regulator, LysR, DNA BINDING PROTEIN; HET: PEO, GOL; 2.0A {Pseudomonas aeruginosa PAO1}
Probab=22.90 E-value=1.6e+02 Score=24.37 Aligned_cols=23 Identities=22% Similarity=0.261 Sum_probs=0.0 Template_Neff=12.100
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhcc
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTET 30 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs 30 (184)
+++||+.|++...+| +.|.+.|.
T Consensus 24 ~~~AA~~l~is~~~vs~~i~~LE~ 47 (316)
T 4X6G_B 24 FGRAAERCHVSQPTLSVGVKKLED 47 (316)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHH
No 141
>3BKH_A lytic transglycosylase; transglycosylase, bacteriophage, phiKZ, endolysin, peptidoglycan, cell wall degradation, lysozyme, HYDROLASE; HET: MSE; 2.5A {Pseudomonas phage phiKZ}
Probab=22.88 E-value=2.4e+02 Score=22.65 Aligned_cols=29 Identities=10% Similarity=0.019 Sum_probs=0.0 Template_Neff=12.200
Q ss_pred HHHHHHHHHhCCCHHHHHHHHhhccCCCc
Q FD01845391_033 6 TDYEEAAKELGCEVAAIKAVAKTETGSYG 34 (184)
Q Consensus 6 ~d~~~aA~~Lg~e~aaIkAV~~VEs~g~G 34 (184)
..+..++..+++++..+.++..+|+.+.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~es~~~~ 128 (268)
T 3BKH_A 100 PVMNAVENATGVRSQLLLTFASIESAFDY 128 (268)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHTTCS
T ss_pred hHHHHHHHHHCCCHHHHHHHHhhhhhcCC
No 142
>PF21506.1 ; Knl-2-like_dom ; Kinetochore null protein 2-like domain
Probab=22.30 E-value=2.3e+02 Score=21.16 Aligned_cols=23 Identities=30% Similarity=0.478 Sum_probs=0.0 Template_Neff=3.500
Q ss_pred CHHHHHHHHHHhC---CCHHHHHHHH
Q FD01845391_033 4 DDTDYEEAAKELG---CEVAAIKAVA 26 (184)
Q Consensus 4 t~~d~~~aA~~Lg---~e~aaIkAV~ 26 (184)
|+.|++++|+.|| .++...+-.+
T Consensus 23 sd~DWekVar~L~k~gr~~e~ck~~A 48 (54)
T E3MVV7_CAERE/6 23 SEADWTEIARLLAKNGADGEAVKQTA 48 (54)
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHH
No 143
>1F6V_A DNA TRANSPOSITION PROTEIN; Mu phage, recombination, transposition, ATPase, DNA binding, high salt, solution structure, DNA BINDING PROTEIN; NMR {Enterobacteria phage Mu} SCOP: l.1.1.1, a.49.1.1
Probab=21.96 E-value=3.9e+02 Score=20.06 Aligned_cols=34 Identities=9% Similarity=0.086 Sum_probs=0.0 Template_Neff=8.200
Q ss_pred CCCCHHHHHHHHHHhCC-CHHHHHHHHhhccCCCc
Q FD01845391_033 1 DKIDDTDYEEAAKELGC-EVAAIKAVAKTETGSYG 34 (184)
Q Consensus 1 ~~lt~~d~~~aA~~Lg~-e~aaIkAV~~VEs~g~G 34 (184)
..++++|+...+..+|+ +.++++.+.++=...+|
T Consensus 11 ~~~~~~Dv~~i~~~~~v~~~~~~~~l~~i~~~~G~ 45 (91)
T 1F6V_A 11 NKTKKADVKAIADAWQINGEKELELLQQIAQKPGA 45 (91)
T ss_dssp SSCSGGGTTHHHHSSTTSSSHHHHHHHTTSSSCSC
T ss_pred CCCCHHHHHHHHHHcCCCCHHHHHHHHHHHcCCCh
No 144
>PF02317.21 ; Octopine_DH ; NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
Probab=21.65 E-value=1.7e+02 Score=23.83 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=0.0 Template_Neff=8.400
Q ss_pred HHHHHHHhCCCHHHHHHHHhh
Q FD01845391_033 8 YEEAAKELGCEVAAIKAVAKT 28 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaIkAV~~V 28 (184)
+...|+.+||++..|.+|.+.
T Consensus 122 ~~~la~~~gv~tP~~~~~i~~ 142 (147)
T D1AJR0_SEBTE/1 122 WSSLGKAIGIPTPTIDAVISL 142 (147)
T ss_pred HHHHHHHhCCCCHHHHHHHHH
No 145
>PF11387.12 ; DUF2795 ; Protein of unknown function (DUF2795)
Probab=21.55 E-value=3.1e+02 Score=17.75 Aligned_cols=27 Identities=22% Similarity=0.176 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred CCCHHHHHHHHHHhCCCHHHHHHHHhh
Q FD01845391_033 2 KIDDTDYEEAAKELGCEVAAIKAVAKT 28 (184)
Q Consensus 2 ~lt~~d~~~aA~~Lg~e~aaIkAV~~V 28 (184)
+.+.+++.+.|+.-|++...+..+.+.
T Consensus 7 Pa~k~~ii~~a~~~~a~~~~~~~L~~l 33 (44)
T G2NA71_STREK/1 7 PAGKDDLLTAAQAANARDEVIKALQGI 33 (44)
T ss_pred CCCHHHHHHHHHHCCCCHHHHHHHHCC
No 146
>8H3V_S NtcB; transcription activation complex, coordinated regulation, TRANSCRIPTION; 4.5A {Anabaena}
Probab=21.46 E-value=1.8e+02 Score=23.89 Aligned_cols=23 Identities=22% Similarity=0.460 Sum_probs=0.0 Template_Neff=12.300
Q ss_pred HHHHHHHhCCCHHHH-HHHHhhcc
Q FD01845391_033 8 YEEAAKELGCEVAAI-KAVAKTET 30 (184)
Q Consensus 8 ~~~aA~~Lg~e~aaI-kAV~~VEs 30 (184)
+++||+.||+...+| +.|.+.|.
T Consensus 18 ~~~aA~~l~~s~~~~s~~i~~le~ 41 (312)
T 8H3V_S 18 FQKAASKCGVTQSTISRQIQSLEA 41 (312)
T ss_dssp THHHHTTTCCCTTTTHHHHHHHTT
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHH
No 147
>4P0G_A Membrane-bound lytic murein transglycosylase F; Lytic transglycosylase, glycosyltransferase, ABC substrate binding-like domain, peptidoglycan, LYASE; HET: NAG, BLG, AMU; 1.65A {Pseudomonas aeruginosa}
Probab=21.41 E-value=2.1e+02 Score=26.31 Aligned_cols=27 Identities=15% Similarity=0.347 Sum_probs=0.0 Template_Neff=10.500
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccC
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETG 31 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~ 31 (184)
...+.+.++..|+++..|.||..+||.
T Consensus 267 ~~~~~~~~~~~~~~~~l~~a~~~~es~ 293 (435)
T 4P0G_A 267 ESHFKQSGKQLDTDWRLLAAIGYQESL 293 (435)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHS
T ss_pred HHHHHHHHhhhCCCHHHHHHHHHHHhc
No 148
>2F1K_A prephenate dehydrogenase; arogenate/prephenate dehydrogenase, tyrosine synthesis, X-ray crystallography structure, OXIDOREDUCTASE; HET: NAP, OCS, TRS, OMT; 1.55A {Synechocystis sp.} SCOP: c.2.1.6, a.100.1.12
Probab=21.39 E-value=8.7e+02 Score=21.50 Aligned_cols=65 Identities=14% Similarity=0.220 Sum_probs=0.0 Template_Neff=9.600
Q ss_pred HHHCCCcchhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHhCHHHHHHHHcCCHHHHHHHhc
Q FD01845391_033 100 LKSASWGKFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKADRVLLHSIRTKDWLSFAKRYN 168 (184)
Q Consensus 100 L~SaSWG~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~~~~L~~aL~~kdW~~FAr~YN 168 (184)
+...+.+.|.-| ....-.+++-+.+-...+...-+.++-.|++.-..|.+.|+++|+..|.+..+
T Consensus 204 ~~~~~~~~f~~~----~r~~~~~~~~~~~i~~~N~~~~~~~l~~~~~~l~~~~~~l~~~d~~~l~~~~~ 268 (279)
T 2F1K_A 204 AQNLASSGFRDT----SRVGGGNPELGTMMATYNQRALLKSLQDYRQHLDQLITLISNQQWPELHRLLQ 268 (279)
T ss_dssp HHHHCCHHHHHH----HTGGGSCHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCccHHHH----hhhccCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
No 149
>5KP0_A Flagellar protein FliT,Flagellum-specific ATP synthase; flagella, chaperones, assembly factors, CHAPERONE; NMR {Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)}
Probab=21.07 E-value=3.1e+02 Score=22.47 Aligned_cols=35 Identities=11% Similarity=0.183 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred HHCHHHHHHHHHHHHHhCHHHHHHHHcCCHHHHHH
Q FD01845391_033 131 SKSEKNQLKAFVSFIKADRVLLHSIRTKDWLSFAK 165 (184)
Q Consensus 131 ~~sE~~qL~aFv~FI~~~~~L~~aL~~kdW~~FAr 165 (184)
.......+..+-.+..-...|..+.+..||..|..
T Consensus 1 m~~~~~~~~~~~~ll~lt~~ml~~a~~~dWd~l~~ 35 (140)
T 5KP0_A 1 MTSTVEFINRWQRIALLSQSLLELAQRGEWDLLLQ 35 (140)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
No 150
>3GGO_B Prephenate dehydrogenase; Tyra, HPP, NADH, alpha-beta, OXIDOREDUCTASE; HET: ENO, NAI; 2.15A {Aquifex aeolicus}
Probab=21.06 E-value=7.2e+02 Score=21.45 Aligned_cols=45 Identities=18% Similarity=0.125 Sum_probs=0.0 Template_Neff=11.100
Q ss_pred CCHHHHHHHHHHCHHHHHHHHHHHHHhCHHHHHHHHcCCHHHHHH
Q FD01845391_033 121 ASPEDFVFALSKSEKNQLKAFVSFIKADRVLLHSIRTKDWLSFAK 165 (184)
Q Consensus 121 ~sv~~fV~am~~sE~~qL~aFv~FI~~~~~L~~aL~~kdW~~FAr 165 (184)
.+++.+.+.+..++..-...+-.|.+.-..|.+.|++.|+..|.+
T Consensus 257 ~~~~~~~~~~~~n~~~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~ 301 (314)
T 3GGO_B 257 SDPIMWRDIFLENKENVMKAIEGFEKSLNHLKELIVREAEEELVE 301 (314)
T ss_dssp SCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
No 151
>7VB7_O NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial; Respiratory, Complex, ELECTRON TRANSPORT; HET: PLX, FMN, PEE, NAI, SF4, 2MR, CDL, DCQ, UQ, 8Q1, NDP; 2.4A {Sus scrofa}
Probab=20.76 E-value=2.8e+02 Score=23.91 Aligned_cols=26 Identities=15% Similarity=0.086 Sum_probs=0.0 Template_Neff=8.900
Q ss_pred CCHHHHHHHHHHhCCCHHHHHHHHhh
Q FD01845391_033 3 IDDTDYEEAAKELGCEVAAIKAVAKT 28 (184)
Q Consensus 3 lt~~d~~~aA~~Lg~e~aaIkAV~~V 28 (184)
|++..+..+|+.||++++.|..|+..
T Consensus 61 i~~~~~~~ia~~l~i~~~~v~~v~sf 86 (217)
T 7VB7_O 61 LPISAMNKVAEILQVPPMRVYEVATF 86 (217)
T ss_dssp CCHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCHHHHHHHHhh
No 152
>2WLU_A DPS-LIKE PEROXIDE RESISTANCE PROTEIN; DNA-BINDING, OXIDOREDUCTASE; HET: GOL; 1.94A {STREPTOCOCCUS PYOGENES} SCOP: a.25.1.0
Probab=20.44 E-value=1.9e+02 Score=23.03 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=0.0 Template_Neff=10.300
Q ss_pred chhhcHHHHHHcCCCCHHHHHHHHHHCHHHHHHHHHHHHHh
Q FD01845391_033 107 KFQILASNFATAGYASPEDFVFALSKSEKNQLKAFVSFIKA 147 (184)
Q Consensus 107 ~FQIMG~N~~~~G~~sv~~fV~am~~sE~~qL~aFv~FI~~ 147 (184)
.++.+..+...-+|..+.++...+...+..|.+.+...|..
T Consensus 45 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~h~~~l~e~i~~ 85 (175)
T 2WLU_A 45 IVHQVHWYMRGPGFLYLHPKMDELLDSLNANLDEVSERLIT 85 (175)
T ss_dssp HHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 153
>3GXR_D Goose-type lysozyme 1; Atlantic cod, fish lysozyme, active site residues, substrate binding sites, surface potential, muramidase activity, immune system; HET: NAG; 1.7A {Gadus morhua} SCOP: d.2.1.5
Probab=20.37 E-value=3.4e+02 Score=21.60 Aligned_cols=29 Identities=21% Similarity=0.153 Sum_probs=0.0 Template_Neff=10.700
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhccCCC
Q FD01845391_033 5 DTDYEEAAKELGCEVAAIKAVAKTETGSY 33 (184)
Q Consensus 5 ~~d~~~aA~~Lg~e~aaIkAV~~VEs~g~ 33 (184)
...+.+++...++++..+.++..+||...
T Consensus 47 ~~~~~~~~~~~~~~~~~~~a~~~~es~~~ 75 (187)
T 3GXR_D 47 KSFINNVAKKHVVDPAVIAAIISRESRAG 75 (187)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHccCCC