Query FD01849511_04481 sugar-binding protein
Match_columns 128
No_of_seqs 15 out of 23
Neff 2.92108
Searched_HMMs 86581
Date Tue Feb 27 20:15:26 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/6688108.hhr -oa3m ../results/6688108.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4RSI_A Structural maintenance 58.8 29 0.00034 26.9 3.6 40 23-66 134-173 (397)
2 7DG5_C Structural maintenance 46.2 93 0.0011 22.1 4.2 36 32-71 58-93 (215)
3 5H69_A Chromosome partition pr 45.6 87 0.001 22.7 4.1 36 32-71 74-109 (261)
4 7BQS_A Nomur; de novo designed 42.1 78 0.0009 25.5 3.7 32 32-68 41-72 (122)
5 4U4P_B Structural maintenance 42.0 1.3E+02 0.0015 21.6 4.5 32 32-68 65-96 (247)
6 4RSJ_C Chromosome partition pr 39.5 1.2E+02 0.0014 22.4 4.1 43 23-71 84-126 (276)
7 PF18330.5 ; Lig_C ; Ligase Pab 38.3 54 0.00063 25.4 2.3 31 36-66 52-82 (121)
8 PF18095.5 ; PAS_12 ; UPF0242 C 38.1 47 0.00054 27.8 2.1 26 26-55 94-119 (153)
9 4U4P_A Structural maintenance 35.7 1.5E+02 0.0017 21.3 4.0 31 32-66 61-91 (233)
10 6WG6_B Structural maintenance 34.4 1.9E+02 0.0022 21.0 4.4 34 32-69 87-120 (256)
11 1GXL_B CHROMOSOME SEGREGATION 33.4 2.1E+02 0.0024 20.1 4.4 36 32-71 56-91 (213)
12 PF18075.5 ; FtsX_ECD ; FtsX ex 31.3 2.4E+02 0.0028 18.5 4.6 40 27-70 7-46 (90)
13 PF18029.5 ; Glyoxalase_6 ; Gly 29.5 1.1E+02 0.0013 18.6 2.3 18 53-70 4-22 (116)
14 3L7T_C Putative uncharacterize 29.1 1.3E+02 0.0015 18.6 2.6 18 53-70 11-28 (134)
15 3RMU_A Methylmalonyl-CoA epime 29.1 1.3E+02 0.0015 18.9 2.6 18 53-70 11-28 (134)
16 4MTS_A Lactoylglutathione lyas 28.1 1.3E+02 0.0015 18.7 2.5 18 53-70 8-25 (131)
17 PF12681.11 ; Glyoxalase_2 ; Gl 27.8 1.5E+02 0.0017 17.7 2.6 18 53-70 6-23 (119)
18 5XJL_M Survival motor neuron p 27.5 1.6E+02 0.0018 18.3 2.7 21 32-52 16-36 (37)
19 1GXJ_A CHROMOSOME SEGREGATION 27.2 3E+02 0.0035 19.2 4.3 36 32-71 44-79 (186)
20 5MG8_C Structural maintenance 27.1 2.2E+02 0.0025 22.8 4.0 36 32-71 125-161 (347)
21 5C68_A Glyoxalase/bleomycin re 27.0 1.5E+02 0.0017 18.3 2.5 18 53-70 11-28 (126)
22 4KYZ_D Designed protein OR327; 26.4 1.7E+02 0.002 25.4 3.5 32 32-67 31-66 (172)
23 PF14506.10 ; CppA_N ; CppA N-t 25.9 1.5E+02 0.0017 18.2 2.4 18 53-70 6-23 (125)
24 4RSI_B Structural maintenance 25.1 3E+02 0.0035 21.7 4.4 32 32-68 146-177 (397)
25 6KTO_D Shieldin complex subuni 24.4 76 0.00088 21.4 1.0 7 122-128 10-16 (54)
26 4NAZ_A Metallothiol transferas 24.3 1.7E+02 0.0019 19.2 2.5 18 53-70 16-33 (145)
27 3BT3_A Glyoxalase-related enzy 23.9 1.8E+02 0.0021 18.6 2.6 18 53-70 27-44 (148)
28 8AS8_B JetC; SMC complexes, ba 23.4 1.6E+02 0.0018 28.2 3.0 41 23-67 474-516 (1096)
29 6TPI_C Cell division protein F 23.3 4.1E+02 0.0047 18.6 4.4 36 35-70 14-50 (110)
30 5UHJ_B Glyoxalase/bleomycin re 22.6 1.9E+02 0.0021 18.1 2.4 18 53-70 13-30 (129)
31 3L51_A Structural maintenance 22.6 3.7E+02 0.0042 18.8 4.0 31 32-66 30-60 (161)
32 1QTO_A BLEOMYCIN-BINDING PROTE 22.6 1.8E+02 0.0021 18.8 2.4 18 53-70 11-28 (122)
33 5Y3T_B E3 ubiquitin-protein li 22.5 2.8E+02 0.0032 22.2 3.8 42 32-74 48-89 (158)
34 1TWU_A Hypothetical protein yy 22.5 1.7E+02 0.002 18.6 2.3 18 53-70 17-34 (139)
35 PF00903.29 ; Glyoxalase ; Glyo 22.3 2.1E+02 0.0024 17.5 2.5 18 53-70 7-24 (123)
36 3SK2_A EhpR; antibiotic resist 22.3 2.1E+02 0.0024 18.2 2.6 18 53-70 19-36 (132)
37 6HE6_A Cell division protein F 22.0 4.7E+02 0.0055 19.0 4.6 38 35-72 36-74 (117)
38 6VGB_A De novo designed protei 22.0 3.3E+02 0.0038 22.5 4.2 32 35-69 87-119 (121)
39 4RT5_B Glyoxalase/bleomycin re 22.0 2.2E+02 0.0025 17.5 2.6 18 53-70 24-41 (114)
40 5MG8_B Structural maintenance 21.6 3.4E+02 0.0039 20.8 4.0 36 32-71 136-171 (294)
41 4NVS_B Putative enzyme, glyoxa 21.6 2E+02 0.0023 19.6 2.5 18 53-70 8-25 (163)
42 2QNT_A Uncharacterized protein 21.4 1.7E+02 0.002 18.3 2.1 18 53-70 14-31 (141)
43 PF11363.12 ; DUF3164 ; Protein 21.2 1.8E+02 0.0021 23.9 2.6 24 32-55 152-176 (195)
44 6BU2_A Glyoxalase; Epimerase M 21.1 2.2E+02 0.0026 18.6 2.6 18 53-70 19-36 (151)
45 3ITW_B Protein tioX; bleomycin 21.0 2.4E+02 0.0028 17.6 2.6 18 53-70 8-25 (137)
46 6A4X_A Bleomycin resistance pr 20.9 2.1E+02 0.0024 18.9 2.5 18 53-70 13-30 (130)
47 3RRI_B Glyoxalase/bleomycin re 20.8 2.1E+02 0.0024 17.8 2.4 18 53-70 15-32 (135)
48 3ZW5_B GLYOXALASE DOMAIN-CONTA 20.6 2.3E+02 0.0026 18.3 2.5 18 53-70 33-50 (147)
49 5UJP_B Glyoxalase/bleomycin re 20.6 2.2E+02 0.0026 17.4 2.4 18 53-70 7-24 (114)
50 PF19581.3 ; Glyoxalase_7 ; Gly 20.5 2.5E+02 0.0029 17.4 2.6 19 52-70 19-37 (131)
51 PF08955.14 ; BofC_C ; BofC C-t 20.4 3.3E+02 0.0038 17.9 3.3 25 39-67 49-73 (76)
52 2I7R_A Conserved domain protei 20.4 2.5E+02 0.0029 16.9 2.6 18 53-70 11-28 (118)
53 1XQA_B Glyoxalase/Bleomycin re 20.1 2.6E+02 0.003 16.8 2.6 18 53-70 9-26 (113)
54 PF20955.1 ; Caud_bapl16_4th ; 20.1 97 0.0011 26.4 1.0 27 94-123 108-135 (156)
No 1
>4RSI_A Structural maintenance of chromosomes protein 2; Smc hinge domain with coiled coil, chromosomal condensation, CELL CYCLE; HET: PO4; 2.9A {Saccharomyces cerevisiae}
Probab=58.79 E-value=29 Score=26.90 Aligned_cols=40 Identities=25% Similarity=0.380 Sum_probs=0.0 Template_Neff=12.200
Q ss_pred hcCccCCCcHHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHH
Q FD01849511_044 23 QLKTLKRGTKEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLS 66 (128)
Q Consensus 23 ~l~~ikpGTK~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLk 66 (128)
++-.+.++...|..||+.+ -+..-..|-|.+..||..++.
T Consensus 134 ~~i~v~~~~~~~~~ave~~----l~~~l~~~vv~~~~~~~~~~~ 173 (397)
T 4RSI_A 134 QLFQIDNDNIRYATALQTC----AGGRLFNVVVQDSQTATQLLE 173 (397)
T ss_dssp GTCBCCTGGGGGHHHHHHH----HGGGGGCEEESSHHHHHHHHH
T ss_pred EeeEecCCchhhhHHHHHh----ccCceeEEEECCHHHHHHHHH
No 2
>7DG5_C Structural maintenance of chromosomes protein 1A; cohesin, Smc1, Smc3, hinge, DNA BINDING PROTEIN; 2.0A {Mus musculus}
Probab=46.17 E-value=93 Score=22.06 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHhccc
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEAQGN 71 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa~GN 71 (128)
+.|..||+.+ -+.....+-|.+..++..++.....+
T Consensus 58 ~~~~~~ve~~----l~~~l~~~vv~~~~~~~~~~~~~~~~ 93 (215)
T 7DG5_C 58 KKYQIAVTKV----LGKNMDAIIVDSEKTGRDCIQYIKEQ 93 (215)
T ss_dssp GGGHHHHHHH----HGGGGGCEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----hccccCEEEeCCHHHHHHHHHHHHHc
No 3
>5H69_A Chromosome partition protein Smc; SMC protein, DNA BINDING PROTEIN, CELL CYCLE; 2.20040022156A {Geobacillus stearothermophilus 10}
Probab=45.63 E-value=87 Score=22.68 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=0.0 Template_Neff=12.300
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHhccc
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEAQGN 71 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa~GN 71 (128)
..|..||+++ -+.....+-|.+..|+..+++....+
T Consensus 74 ~~~~~aie~~----l~~~~~~~vv~~~~~~~~~~~~~~~~ 109 (261)
T 5H69_A 74 DRYETAIETA----LGGAMQHIVVDSEQAARQAIHYLKTN 109 (261)
T ss_dssp GGGHHHHHHH----HGGGGGCEEESCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH----hchhccEEEECCHHHHHHHHHHHHHc
No 4
>7BQS_A Nomur; de novo designed proteins, DE NOVO PROTEIN; NMR {synthetic construct}
Probab=42.13 E-value=78 Score=25.54 Aligned_cols=32 Identities=25% Similarity=0.438 Sum_probs=0.0 Template_Neff=1.000
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHh
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEA 68 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa 68 (128)
.+|.+|.+.|-+|.+....+ +.+.||.||+|+
T Consensus 41 eqwrqaaekifeafreasng-----ntekakklleea 72 (122)
T 7BQS_A 41 EQWRQAAEKIFEAFREASNG-----NTEKAKKLLEEA 72 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC-----CHHHHHHHHHHH
No 5
>4U4P_B Structural maintenance of chromosomes protein 4; Condensin, SMC, PROTEIN BINDING; 1.89A {Homo sapiens}
Probab=41.96 E-value=1.3e+02 Score=21.55 Aligned_cols=32 Identities=13% Similarity=0.038 Sum_probs=0.0 Template_Neff=12.300
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHh
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEA 68 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa 68 (128)
..|..||+.+ -+. ...+-|.+..|+..+++..
T Consensus 65 ~~~~~ave~~----l~~-l~~~vv~~~~~~~~~~~~~ 96 (247)
T 4U4P_B 65 EKYDVAISSC----CHA-LDYIVVDSIDIAQECVNFL 96 (247)
T ss_dssp GGGHHHHHHH----CGG-GGSEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHH----ccc-CcEEEECCHHHHHHHHHHH
No 6
>4RSJ_C Chromosome partition protein Smc; Smc hinge domain with coiled coils, CELL CYCLE; 3.5A {Pyrococcus furiosus}
Probab=39.45 E-value=1.2e+02 Score=22.36 Aligned_cols=43 Identities=16% Similarity=0.080 Sum_probs=0.0 Template_Neff=12.100
Q ss_pred hcCccCCCcHHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHhccc
Q FD01849511_044 23 QLKTLKRGTKEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEAQGN 71 (128)
Q Consensus 23 ~l~~ikpGTK~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa~GN 71 (128)
++-.++++ .|..||+.+ -+.....+-|.+..|+..+++....+
T Consensus 84 ~~i~v~~~--~~~~ave~~----l~~~l~~~vv~~~~~~~~~~~~~~~~ 126 (276)
T 4RSJ_C 84 ELIKVKDE--AYALAIEVA----LGNRADNVVVEDELVAEKAIKYLKEH 126 (276)
T ss_dssp HHCEECSS--SSHHHHHHH----HGGGGGCEEESSHHHHHHHHHHHHTT
T ss_pred HheecChH--HHHHHHHHH----hcccccEEEECCHHHHHHHHHHHHHc
No 7
>PF18330.5 ; Lig_C ; Ligase Pab1020 C-terminal region
Probab=38.34 E-value=54 Score=25.43 Aligned_cols=31 Identities=16% Similarity=0.078 Sum_probs=0.0 Template_Neff=6.300
Q ss_pred HHHHHHHHHhcCCCccceeeCCHHHHHHHHH
Q FD01849511_044 36 EAVKAMQEAVGNGEKFQVRVESSTDAIAFLS 66 (128)
Q Consensus 36 ~AV~~~~~a~~~~~k~~vRV~t~~DAkalLk 66 (128)
+||+.+++--.-...+.|||.+.+.|.+||+
T Consensus 52 eai~~v~~g~~v~e~f~irf~~~~~~~~~~~ 82 (121)
T O29409_ARCFU/2 52 ESIRECKRGEMVCEESELVFESPDVLELFKL 82 (121)
T ss_pred HHHHHHHcCCceeEEEEEEeCCHHHHHHHHH
No 8
>PF18095.5 ; PAS_12 ; UPF0242 C-terminal PAS-like domain
Probab=38.14 E-value=47 Score=27.84 Aligned_cols=26 Identities=19% Similarity=0.616 Sum_probs=0.0 Template_Neff=4.100
Q ss_pred ccCCCcHHHHHHHHHHHHHhcCCCccceee
Q FD01849511_044 26 TLKRGTKEWKEAVKAMQEAVGNGEKFQVRV 55 (128)
Q Consensus 26 ~ikpGTK~W~~AV~~~~~a~~~~~k~~vRV 55 (128)
+|.+|..+|+.++.++ ......++|+
T Consensus 94 iv~~g~~eW~~~L~~l----~~~~e~~~~L 119 (153)
T F8L247_PARAV/2 94 IVQDGLAEWKTQIQGL----SSSHEAKIRL 119 (153)
T ss_pred HhhhCHHHHHHHHHhc----ccCCceEEEE
No 9
>4U4P_A Structural maintenance of chromosomes protein 2; Condensin, SMC, PROTEIN BINDING; 1.89A {Homo sapiens}
Probab=35.73 E-value=1.5e+02 Score=21.28 Aligned_cols=31 Identities=13% Similarity=0.218 Sum_probs=0.0 Template_Neff=12.100
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHH
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLS 66 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLk 66 (128)
..|..||+.+ -+.....+-|.+.++|..++.
T Consensus 61 ~~~~~aie~~----l~~~l~~~vv~~~~~~~~~~~ 91 (233)
T 4U4P_A 61 TSATTALELV----AGERLYNVVVDTEVTGKKLLE 91 (233)
T ss_dssp GGGHHHHHHH----HGGGGGCEEESCHHHHHHHHH
T ss_pred hhHHHHHHHH----hcccceeEEeCCHHHHHHHHH
No 10
>6WG6_B Structural maintenance of chromosomes protein 3; Protein-DNA complex, ATPase, DNA-binding protein, Genome organization, Sister chromatid cohesion, Transcription regulation, CELL CYCLE, CELL CYCLE-DNA; 3.54A {Homo sapiens}
Probab=34.38 E-value=1.9e+02 Score=21.01 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=0.0 Template_Neff=12.200
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHhc
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEAQ 69 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa~ 69 (128)
+.|..||+.+ -+.....+-|.+.+++..++.+..
T Consensus 87 ~~~~~ave~~----l~~~l~~~vv~~~~~~~~~~~~~~ 120 (256)
T 6WG6_B 87 PAFYTCVEVT----AGNRLFYHIVDSDEVSTKILMEFN 120 (256)
T ss_dssp GGGHHHHHHH----HGGGGGCEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----hcccceEEEeCCHHHHHHHHHHHH
No 11
>1GXL_B CHROMOSOME SEGREGATION SMC PROTEIN; CHROMOSOME SEGREGATION, SMC DIMERISATION DOMAIN, ANTI PARALLEL COILED COIL, SMC PROTEINS; 3.0A {THERMOTOGA MARITIMA} SCOP: d.215.1.1
Probab=33.39 E-value=2.1e+02 Score=20.12 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=0.0 Template_Neff=12.200
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHhccc
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEAQGN 71 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa~GN 71 (128)
..|..||+++ -+.....+.|.+.++|.++++....+
T Consensus 56 ~~~~~a~e~~----l~~~l~~~v~~~~~~~~~~~~~~~~~ 91 (213)
T 1GXL_B 56 EKYSLAVSVL----LGGTAQNIVVRNVDTAKAIVEFLKQN 91 (213)
T ss_dssp TTTHHHHHHH----HGGGGGCEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----hccccCEEEeCCHHHHHHHHHHHHhc
No 12
>PF18075.5 ; FtsX_ECD ; FtsX extracellular domain
Probab=31.26 E-value=2.4e+02 Score=18.49 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=0.0 Template_Neff=9.900
Q ss_pred cCCCcHHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHhcc
Q FD01849511_044 27 LKRGTKEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 27 ikpGTK~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa~G 70 (128)
++++ .+=....+.|+ ....-..|+.-|.++|.+.+.+.+|
T Consensus 7 l~~~-~~~~~l~~~l~---~~~~V~~v~~~s~~~a~~~~~~~~~ 46 (90)
T E3CVP0_9BACT/5 7 MKPD-ADMEATAQRVR---RLPGVKAVEIITAEKALERLKARLG 46 (90)
T ss_pred eCCc-hhHHHHHHHHH---cCCCeeEEEEEcHHHHHHHHHHHHc
No 13
>PF18029.5 ; Glyoxalase_6 ; Glyoxalase-like domain
Probab=29.50 E-value=1.1e+02 Score=18.56 Aligned_cols=18 Identities=17% Similarity=0.263 Sum_probs=0.0 Template_Neff=12.700
Q ss_pred eeeCCHHHHHHHHHHhc-c
Q FD01849511_044 53 VRVESSTDAIAFLSEAQ-G 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~-G 70 (128)
+.|.+.+.|.+|+.+.+ |
T Consensus 4 ~~v~d~~~~~~fy~~~l~g 22 (116)
T A0A0Q7E835_9HY 4 FDCTRAAPLARFWTEVIQG 22 (116)
T ss_pred EEcCChHHHHHHHHHHhcC
No 14
>3L7T_C Putative uncharacterized protein; SMU.1112c, streptococcus mutans, METAL BINDING PROTEIN; 1.8A {Streptococcus mutans}
Probab=29.06 E-value=1.3e+02 Score=18.57 Aligned_cols=18 Identities=17% Similarity=0.265 Sum_probs=0.0 Template_Neff=13.000
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.++|.+++.+++|
T Consensus 11 ~~v~d~~~~~~fy~~~lg 28 (134)
T 3L7T_C 11 LIVSDYDKSYEFYVNQLG 28 (134)
T ss_dssp EECSCHHHHHCCCCCCTC
T ss_pred EEeCCHHHHHHHHHHhhC
No 15
>3RMU_A Methylmalonyl-CoA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondria, ISOMERASE; HET: EDO, PG4; 1.8A {Homo sapiens} SCOP: l.1.1.1, d.32.1.0
Probab=29.06 E-value=1.3e+02 Score=18.85 Aligned_cols=18 Identities=28% Similarity=0.379 Sum_probs=0.0 Template_Neff=12.700
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.++|.+|+.+.+|
T Consensus 11 ~~~~d~~~a~~fy~~~lg 28 (134)
T 3RMU_A 11 IAVPDLEKAAAFYKNILG 28 (134)
T ss_dssp EECSCHHHHHHCCCCCSC
T ss_pred EEeCCHHHHHHHHHHHhC
No 16
>4MTS_A Lactoylglutathione lyase; isomerase, hydrolase, metal binding, LYASE; HET: GOL; 1.8A {Pseudomonas aeruginosa} SCOP: d.32.1.0
Probab=28.13 E-value=1.3e+02 Score=18.66 Aligned_cols=18 Identities=28% Similarity=0.425 Sum_probs=0.0 Template_Neff=12.800
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.|.+++.+.+|
T Consensus 8 l~~~d~~~~~~fy~~~lg 25 (131)
T 4MTS_A 8 LRVADLEAALEFYTRALD 25 (131)
T ss_dssp EECSCHHHHHHCCCCCTC
T ss_pred EEecCHHHHHHHHHHccC
No 17
>PF12681.11 ; Glyoxalase_2 ; Glyoxalase-like domain
Probab=27.77 E-value=1.5e+02 Score=17.66 Aligned_cols=18 Identities=17% Similarity=0.185 Sum_probs=0.0 Template_Neff=13.200
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.+.+|..+.+|
T Consensus 6 ~~~~d~~~~~~fy~~~lg 23 (119)
T A5HYY7_CLOBH/3 6 LAVKNVSVSRQFYEELFD 23 (119)
T ss_pred EEeCCHHHHHHHHHHHhC
No 18
>5XJL_M Survival motor neuron protein; splicing; 2.5A {Homo sapiens}
Probab=27.47 E-value=1.6e+02 Score=18.29 Aligned_cols=21 Identities=29% Similarity=0.540 Sum_probs=0.0 Template_Neff=6.400
Q ss_pred HHHHHHHHHHHHHhcCCCccc
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQ 52 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~ 52 (128)
++|..||..++.+++++...+
T Consensus 16 ~ayd~a~~~~k~~l~~~~~~e 36 (37)
T 5XJL_M 16 KAYDKAVASFKHALKNGDICE 36 (37)
T ss_pred HHHHHHHHHHHHHHHcCCCCC
No 19
>1GXJ_A CHROMOSOME SEGREGATION SMC PROTEIN; CHROMOSOME SEGREGATION, SMC DIMERISATION DOMAIN, ANTI PARALLEL COILED COIL, SMC PROTEINS; 2.0A {THERMOTOGA MARITIMA} SCOP: d.215.1.1
Probab=27.23 E-value=3e+02 Score=19.18 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=0.0 Template_Neff=11.800
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHhccc
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEAQGN 71 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa~GN 71 (128)
+.|..||+.+ -......+.|.+..+|.+.|+....+
T Consensus 44 ~~~~~a~~~~----l~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (186)
T 1GXJ_A 44 EKYSLAVSVL----LGGTAQNIVVRNVDTAKAIVEFLKQN 79 (186)
T ss_dssp GGGHHHHHHH----HGGGGGCEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----hccccCEEEeCCHHHHHHHHHHHHhc
No 20
>5MG8_C Structural maintenance of chromosomes protein 5; SMC, Structural Maintenance of Chromosomes, Hinge Domain, Smc5, Smc6, Smc5/6, recombination; HET: SO4, GOL; 2.75A {Schizosaccharomyces pombe}
Probab=27.08 E-value=2.2e+02 Score=22.85 Aligned_cols=36 Identities=6% Similarity=0.049 Sum_probs=0.0 Template_Neff=11.000
Q ss_pred HHHHHHHHHHHHHhcCC-CccceeeCCHHHHHHHHHHhccc
Q FD01849511_044 32 KEWKEAVKAMQEAVGNG-EKFQVRVESSTDAIAFLSEAQGN 71 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~-~k~~vRV~t~~DAkalLkEa~GN 71 (128)
..|..||+.+ -+. .-..|-|.+.+|+..++..+..+
T Consensus 125 ~~~~~ave~~----lg~~~l~~~vv~~~~~~~~l~~~l~~~ 161 (347)
T 5MG8_C 125 KGFAALIEGF----FRTDTFRTFIMSNYNDYLKLMDLITSK 161 (347)
T ss_dssp GGGHHHHHHH----HHHHHHTEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----CCHhheeEEEeCCHHHHHHHHHHhhhc
No 21
>5C68_A Glyoxalase/bleomycin resistance protein/dioxygenase; Arsenic, lyase, dioxygenase, OXIDOREDUCTASE; 1.4618A {Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081)}
Probab=26.99 E-value=1.5e+02 Score=18.30 Aligned_cols=18 Identities=33% Similarity=0.486 Sum_probs=0.0 Template_Neff=12.800
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.|.+|..+.+|
T Consensus 11 l~~~d~~~~~~fy~~~lg 28 (126)
T 5C68_A 11 LRVPDLEASIGFYSKLFG 28 (126)
T ss_dssp EEESCHHHHHHHHHHHHT
T ss_pred EEeCCHHHHHhHHHHHhC
No 22
>4KYZ_D Designed protein OR327; Structural Genomics, PSI-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, domain insertion, DE NOVO PROTEIN; HET: MSE; 2.492A {synthetic construct}
Probab=26.43 E-value=1.7e+02 Score=25.37 Aligned_cols=32 Identities=28% Similarity=0.326 Sum_probs=0.0 Template_Neff=2.600
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeC----CHHHHHHHHHH
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVE----SSTDAIAFLSE 67 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~----t~~DAkalLkE 67 (128)
+.|++-|+.+ +.-+--+|++. ++.||+.|+..
T Consensus 31 kaLkElv~~l----rk~GAkri~i~Ita~~skeAe~Lka~ 66 (172)
T 4KYZ_D 31 KVLNELMDYI----KKQGAKRVRISITARSSKEAYKFLAI 66 (172)
T ss_dssp HHHHHHHHHH----HHHCCSEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHH----HHcCCceEEEEEeccCcHHHHHHHHH
No 23
>PF14506.10 ; CppA_N ; CppA N-terminal
Probab=25.85 E-value=1.5e+02 Score=18.23 Aligned_cols=18 Identities=28% Similarity=0.549 Sum_probs=0.0 Template_Neff=12.800
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.+.+|..+++|
T Consensus 6 ~~v~d~~~~~~fy~~~lg 23 (125)
T Q5M2X6_STRT2/1 6 FRVNNRQENIDFYQNTLG 23 (125)
T ss_pred EEeCCHHHHHHHHHhccC
No 24
>4RSI_B Structural maintenance of chromosomes protein 4; Smc hinge domain with coiled coil, chromosomal condensation, CELL CYCLE; HET: PO4; 2.9A {Saccharomyces cerevisiae}
Probab=25.06 E-value=3e+02 Score=21.68 Aligned_cols=32 Identities=13% Similarity=0.036 Sum_probs=0.0 Template_Neff=12.100
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHh
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEA 68 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa 68 (128)
+.|..||+.+ -+ .-..|-|.+..|+..++...
T Consensus 146 ~~~~~ave~~----l~-~l~~~vv~~~~~~~~~~~~l 177 (397)
T 4RSI_B 146 DSFDVAISTA----CP-RLDDVVVDTVECAQHCIDYL 177 (397)
T ss_dssp GGGHHHHHHH----CG-GGGSEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHH----cc-ccCEEEeCCHHHHHHHHHHH
No 25
>6KTO_D Shieldin complex subunit 2; Shieldin, Complex, Conformational dimer, NHEJ, REPLICATION; 3.44976331487A {Homo sapiens}
Probab=24.39 E-value=76 Score=21.40 Aligned_cols=7 Identities=57% Similarity=1.331 Sum_probs=0.0 Template_Neff=6.200
Q ss_pred eeeecCC
Q FD01849511_044 122 HIFYDIP 128 (128)
Q Consensus 122 HIFy~~p 128 (128)
|||+|-|
T Consensus 10 HIFlGAP 16 (54)
T 6KTO_D 10 HIFWGAP 16 (54)
T ss_dssp CCBCCCC
T ss_pred EEEECCC
No 26
>4NAZ_A Metallothiol transferase FosB; Bacillithiol-S-transferase, TRANSFERASE; HET: SO4; 1.15A {Staphylococcus aureus subsp. aureus} SCOP: d.32.1.0, l.1.1.1
Probab=24.25 E-value=1.7e+02 Score=19.23 Aligned_cols=18 Identities=22% Similarity=0.274 Sum_probs=0.0 Template_Neff=12.100
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.|.+|..+++|
T Consensus 16 ~~v~d~~~~~~fy~~~lg 33 (145)
T 4NAZ_A 16 FSVRNLNDSIHFYRDILL 33 (145)
T ss_dssp EEESCHHHHHCCCCCCSC
T ss_pred EEcCCHHHHHHHHHHhcC
No 27
>3BT3_A Glyoxalase-related enzyme, AraC type; Glyoxalase related enzyme, VOC Superfamily, Clostridium phytofermentans, PSI-2, NYSGXRC, Structural Genomics, Protein Structure Initiative, New York; 2.5A {Clostridium phytofermentans}
Probab=23.94 E-value=1.8e+02 Score=18.59 Aligned_cols=18 Identities=11% Similarity=0.250 Sum_probs=0.0 Template_Neff=12.700
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.|.+|..+++|
T Consensus 27 ~~v~d~~~~~~fy~~~lg 44 (148)
T 3BT3_A 27 YFTKDMDKTVKWFEEILG 44 (148)
T ss_dssp EEESCHHHHHHHHHHTTC
T ss_pred EEeCCHHHHHHHHHHhhC
No 28
>8AS8_B JetC; SMC complexes, bacterial immunity, defense system, DNA loop extrusion, Wadjet, JetABCD, DNA cleavage, plasmid restriction, mksBEFG; HET: ADP; 3.0A {Escherichia coli}
Probab=23.37 E-value=1.6e+02 Score=28.21 Aligned_cols=41 Identities=15% Similarity=0.451 Sum_probs=0.0 Template_Neff=10.800
Q ss_pred hcCccCCCcHHHHHHHHHHHHHhcCCCccceeeCC--HHHHHHHHHH
Q FD01849511_044 23 QLKTLKRGTKEWKEAVKAMQEAVGNGEKFQVRVES--STDAIAFLSE 67 (128)
Q Consensus 23 ~l~~ikpGTK~W~~AV~~~~~a~~~~~k~~vRV~t--~~DAkalLkE 67 (128)
+|-.++|+-..|..||+.+ -++.++.+=|+. ..+|.++|++
T Consensus 474 elv~v~~~d~~w~~aiE~~----Lg~~~~~llV~~~~~~~a~~~~~~ 516 (1096)
T 8AS8_B 474 ELIQVKPEEAQWRGAIERA----VGSNRLRILVAPESAQEALRWVNQ 516 (1096)
T ss_dssp -----------------------------------------------
T ss_pred eeeeechhHhhcHHHHHHH----hcccceeeEeCHHHHHHHHHHHHH
No 29
>6TPI_C Cell division protein FtsX; Complex, PROTEIN BINDING; 2.1A {Escherichia coli (strain K12)}
Probab=23.35 E-value=4.1e+02 Score=18.61 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=0.0 Template_Neff=9.300
Q ss_pred HHHHHHHHHHhcCCCc-cceeeCCHHHHHHHHHHhcc
Q FD01849511_044 35 KEAVKAMQEAVGNGEK-FQVRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 35 ~~AV~~~~~a~~~~~k-~~vRV~t~~DAkalLkEa~G 70 (128)
.+.+.++...++.... ..|+.-|.++|.+.+++.+|
T Consensus 14 ~~~~~~l~~~l~~~~~V~~v~~~s~eea~~~~~~~~~ 50 (110)
T 6TPI_C 14 DDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSG 50 (110)
T ss_dssp HHHHHHHHHHTTTCTTEEEEEEECHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHhCCCccEEEEECHHHHHHHHHHhhC
No 30
>5UHJ_B Glyoxalase/bleomycin resisance protein/dioxygenase; structural genomics, PSI-Biology, protein structure initiative, Midwest Center for Structural Genomics, MCSG, Enzyme Discovery for Natural; HET: MSE; 1.75A {Streptomyces sp. CB03234}
Probab=22.65 E-value=1.9e+02 Score=18.13 Aligned_cols=18 Identities=33% Similarity=0.451 Sum_probs=0.0 Template_Neff=12.600
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.++|..++.+.+|
T Consensus 13 ~~~~d~~~~~~fy~~~lg 30 (129)
T 5UHJ_B 13 VFVNDQDKAIDFYVNTLG 30 (129)
T ss_dssp EECSCHHHHHCCCCCCTC
T ss_pred EEeCCHHHHHHHHHhccC
No 31
>3L51_A Structural maintenance of chromosomes protein 2; Structural Maintenance of Chromosomes (SMC), hinge domain, Cell cycle, Cell division, Cytoplasm, DNA condensation, Mitosis, Nucleus; HET: GOL, MSE; 1.506A {Mus musculus}
Probab=22.63 E-value=3.7e+02 Score=18.77 Aligned_cols=31 Identities=16% Similarity=0.256 Sum_probs=0.0 Template_Neff=11.200
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHH
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLS 66 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLk 66 (128)
..|..||+++ -+..-..+.|.+..+|.+.|+
T Consensus 30 ~~~~~a~e~~----l~~~l~~~v~~~~~~~~~~~~ 60 (161)
T 3L51_A 30 NSTATALEVV----AGERLYNVVVDTEVTAKKLLE 60 (161)
T ss_dssp GGGHHHHHHH----HGGGGGCEEESCHHHHHHHHH
T ss_pred hHHHHHHHHH----hccchhcEEeCCHHHHHHHHH
No 32
>1QTO_A BLEOMYCIN-BINDING PROTEIN; ARM-EXCHANGE, ANTIBIOTIC INHIBITOR; 1.5A {Streptomyces verticillus} SCOP: d.32.1.2
Probab=22.61 E-value=1.8e+02 Score=18.85 Aligned_cols=18 Identities=11% Similarity=0.309 Sum_probs=0.0 Template_Neff=11.600
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.|.+|..+.+|
T Consensus 11 l~~~d~~~a~~fy~~~lg 28 (122)
T 1QTO_A 11 LTAVDVPANVSFWVDTLG 28 (122)
T ss_dssp EEESSHHHHHHCCCCCTC
T ss_pred EEeCChHHHHHHHHHccC
No 33
>5Y3T_B E3 ubiquitin-protein ligase RNF31; HOIP, HOIL-1L, SHARPIN, Linear-Ubiquitin Assembly Complex, NF-KB Activation, LUBAC Tethering Motif, LUBAC Stabilization, LIGASE; 2.4A {Mus musculus}
Probab=22.51 E-value=2.8e+02 Score=22.18 Aligned_cols=42 Identities=17% Similarity=0.234 Sum_probs=0.0 Template_Neff=7.200
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHhcccccc
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEAQGNMNR 74 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa~GNMNR 74 (128)
..|...|+.+.....+.+ ..|=.-|.+||+.-|.+..||+.+
T Consensus 48 ~~w~~~i~~v~~~a~~~~-~~vG~~s~~EAr~ALr~~~Gnv~~ 89 (158)
T 5Y3T_B 48 SELSYVLEMVAELAGQQD-PELGAFSCQEARKAWLDRHGNLDE 89 (158)
T ss_dssp HHHHHHHHHHHHHHHHHC-GGGCCCCHHHHHHHHHHTTTCHHH
T ss_pred HhHHHHHHHHHHHHhccC-CccCCCCHHHHHHHHHHcCCCHHH
No 34
>1TWU_A Hypothetical protein yycE; Structural genomics, Protein structure initiative, MCSG, duplication of the alpha-beta sandwichs. Bacillus subtilis, PSI, Midwest Center; 2.0A {Bacillus subtilis} SCOP: d.32.1.8
Probab=22.47 E-value=1.7e+02 Score=18.63 Aligned_cols=18 Identities=17% Similarity=0.139 Sum_probs=0.0 Template_Neff=12.500
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+...+.+|..+++|
T Consensus 17 ~~~~d~~~~~~fy~~~lG 34 (139)
T 1TWU_A 17 RPTGQLDEIIRFYEEGLC 34 (139)
T ss_dssp EECSCHHHHHCCCCCCSC
T ss_pred eEcCCHHHHHHHHHHccC
No 35
>PF00903.29 ; Glyoxalase ; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Probab=22.34 E-value=2.1e+02 Score=17.48 Aligned_cols=18 Identities=17% Similarity=0.414 Sum_probs=0.0 Template_Neff=12.900
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.+.++.++.+|
T Consensus 7 ~~~~d~~~~~~fy~~~lG 24 (123)
T YRAH_BACSU/2-1 7 LLVNDFKKSVEFYKDSLG 24 (123)
T ss_pred EEeCCHHHHHHHHHHccC
No 36
>3SK2_A EhpR; antibiotic resistance, GRISEOLUTEATE-BINDING PROTEIN; HET: GRI; 1.01A {Pantoea agglomerans}
Probab=22.27 E-value=2.1e+02 Score=18.17 Aligned_cols=18 Identities=17% Similarity=0.063 Sum_probs=0.0 Template_Neff=12.400
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
++|.+.+.+.+|+.+++|
T Consensus 19 l~~~d~~~~~~fy~~~lg 36 (132)
T 3SK2_A 19 VYVSNVERSTDFYRFIFK 36 (132)
T ss_dssp EECSCHHHHHHHHHHHHT
T ss_pred EEecCHHHHHHHHHHhcC
No 37
>6HE6_A Cell division protein FtsX; cell division, MEMBRANE PROTEIN, cell cycle; HET: CAT; 2.0A {Streptococcus pneumoniae}
Probab=22.03 E-value=4.7e+02 Score=18.99 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=0.0 Template_Neff=8.600
Q ss_pred HHHHHHHHHHhcCC-CccceeeCCHHHHHHHHHHhcccc
Q FD01849511_044 35 KEAVKAMQEAVGNG-EKFQVRVESSTDAIAFLSEAQGNM 72 (128)
Q Consensus 35 ~~AV~~~~~a~~~~-~k~~vRV~t~~DAkalLkEa~GNM 72 (128)
.+-+.++...++.. .-..|+.-|.++|.+.+++.+|.+
T Consensus 36 ~~~~~~i~~~l~~~p~V~~v~~~s~eea~~~~~~~~~~~ 74 (117)
T 6HE6_A 36 NNDYHKVYDSLKNMSTVKSVTFSSKEEQYEKLTEIMGDN 74 (117)
T ss_dssp CTTTTHHHHHHHTCTTEEEEEEECHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHHHhccc
No 38
>6VGB_A De novo designed protein RO2_20; Rossmann fold, DE NOVO PROTEIN; NMR {synthetic construct}
Probab=22.02 E-value=3.3e+02 Score=22.53 Aligned_cols=32 Identities=25% Similarity=0.315 Sum_probs=0.0 Template_Neff=3.200
Q ss_pred HHHHHHHHHHhcCCCcccee-eCCHHHHHHHHHHhc
Q FD01849511_044 35 KEAVKAMQEAVGNGEKFQVR-VESSTDAIAFLSEAQ 69 (128)
Q Consensus 35 ~~AV~~~~~a~~~~~k~~vR-V~t~~DAkalLkEa~ 69 (128)
+++.+.++ +.+-...|| |.+.+|||+.|+|..
T Consensus 87 k~~~e~a~---K~g~~veVRkvTdpDEaKk~vkEf~ 119 (121)
T 6VGB_A 87 KEIEKKAR---KKNLPVRIRKVTSPDEAKRWIKEFS 119 (121)
T ss_dssp HHHHHHHH---HTTCCEEEECCCCHHHHHHHHHHHH
T ss_pred HHHHHHHH---HCCCCceEEecCCHHHHHHHHHHHh
No 39
>4RT5_B Glyoxalase/bleomycin resistance protein/dioxygenase; OXIDOREDUCTASE, Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, A/B FOLD, CYTOSOLIC; HET: MSE, TRS; 1.5A {Planctomyces limnophilus DSM 3776}
Probab=22.01 E-value=2.2e+02 Score=17.54 Aligned_cols=18 Identities=6% Similarity=0.230 Sum_probs=0.0 Template_Neff=12.400
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.+.+++.+.+|
T Consensus 24 ~~~~d~~~~~~fy~~~lg 41 (114)
T 4RT5_B 24 ISVTDVAQSVEWYTSHFQ 41 (114)
T ss_dssp EECSCHHHHHHHHHHHSC
T ss_pred EEeCCHHHHHHHHHHhcC
No 40
>5MG8_B Structural maintenance of chromosomes protein 6; SMC, Structural Maintenance of Chromosomes, Hinge Domain, Smc5, Smc6, Smc5/6, recombination; HET: SO4, GOL; 2.75A {Schizosaccharomyces pombe}
Probab=21.65 E-value=3.4e+02 Score=20.77 Aligned_cols=36 Identities=11% Similarity=0.151 Sum_probs=0.0 Template_Neff=11.600
Q ss_pred HHHHHHHHHHHHHhcCCCccceeeCCHHHHHHHHHHhccc
Q FD01849511_044 32 KEWKEAVKAMQEAVGNGEKFQVRVESSTDAIAFLSEAQGN 71 (128)
Q Consensus 32 K~W~~AV~~~~~a~~~~~k~~vRV~t~~DAkalLkEa~GN 71 (128)
..|..||+.+ -+..-..+-|.+..+|..++.....+
T Consensus 136 ~~~~~ave~~----l~~~l~~~vv~~~~~~~~~~~~l~~~ 171 (294)
T 5MG8_B 136 QKWHLIIERI----LGNVINGFIVRSHHDQLILKELMRQS 171 (294)
T ss_dssp GGGHHHHHHH----SCSGGGSEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----HchhcceEEeCCHHHHHHHHHHHHHc
No 41
>4NVS_B Putative enzyme, glyoxalase family; Structural Genomics, PSI-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, CfR3, putative glyoxalase, PF12681, PF00903; HET: MSE; 2.385A {Clostridium difficile}
Probab=21.56 E-value=2e+02 Score=19.58 Aligned_cols=18 Identities=22% Similarity=0.348 Sum_probs=0.0 Template_Neff=11.800
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.|.+|..+.+|
T Consensus 8 l~v~d~~~~~~fy~~~lG 25 (163)
T 4NVS_B 8 IVVEDIEKSKKFYYDVLG 25 (163)
T ss_dssp EEESCHHHHHHHCCCCCC
T ss_pred EEeCCHHHHHHHHHHhhC
No 42
>2QNT_A Uncharacterized protein Atu1872; Glyoxalase/bleomycin resistance protein/dioxygenase family related protein, PSI-2, MCSG, Structural Genomics, Protein Structure Initiative, Midwest Center for; HET: EPE, MSE; 1.4A {Agrobacterium tumefaciens str.}
Probab=21.44 E-value=1.7e+02 Score=18.34 Aligned_cols=18 Identities=17% Similarity=0.218 Sum_probs=0.0 Template_Neff=12.900
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.|.+|..+++|
T Consensus 14 ~~~~d~~~~~~fy~~~lG 31 (141)
T 2QNT_A 14 PFVRDINRSKSFYRDRLG 31 (141)
T ss_dssp CEESCHHHHHHCCCCCTC
T ss_pred EEeccHHHHHhHHHhccC
No 43
>PF11363.12 ; DUF3164 ; Protein of unknown function (DUF3164)
Probab=21.24 E-value=1.8e+02 Score=23.93 Aligned_cols=24 Identities=46% Similarity=0.577 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred HHHHHHHHHHHHH-hcCCCccceee
Q FD01849511_044 32 KEWKEAVKAMQEA-VGNGEKFQVRV 55 (128)
Q Consensus 32 K~W~~AV~~~~~a-~~~~~k~~vRV 55 (128)
+.|.+||++|++| .-.+.+.-||+
T Consensus 152 ~~w~~am~~i~~s~~~~~sk~Yir~ 176 (195)
T Q6QIE4_BPBMU/1 152 PRWLEAMRAIGEALQVIGSKSYVRV 176 (195)
T ss_pred HHHHHHHHHHHHhceeecceeEEEE
No 44
>6BU2_A Glyoxalase; Epimerase Metal Binding Methylmalonate Pathway VOC superfamily, ISOMERASE; 1.997A {Mycobacterium tuberculosis H37Rv} SCOP: l.1.1.1, d.32.1.0
Probab=21.13 E-value=2.2e+02 Score=18.56 Aligned_cols=18 Identities=22% Similarity=0.337 Sum_probs=0.0 Template_Neff=12.400
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.+.+++.+.+|
T Consensus 19 l~~~d~~~~~~fy~~~lG 36 (151)
T 6BU2_A 19 IAVADLDVAIEWYHDHLG 36 (151)
T ss_dssp EECSCHHHHHHHHHHHHC
T ss_pred EEeCCHHHHHHHHHHhhC
No 45
>3ITW_B Protein tioX; bleomycin resistance fold, bisintercalator, solvent-exposed Trp residue, thiocoraline, PROTEIN BINDING, PEPTIDE BINDING PROTEIN; 2.15A {Micromonospora sp. ML1}
Probab=20.98 E-value=2.4e+02 Score=17.59 Aligned_cols=18 Identities=17% Similarity=0.315 Sum_probs=0.0 Template_Neff=12.900
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.+.+|+.+.+|
T Consensus 8 l~~~d~~~~~~fy~~~lg 25 (137)
T 3ITW_B 8 LAYTDPDRAVDWLVRVFG 25 (137)
T ss_dssp EEESCHHHHHHHHHHHSC
T ss_pred EEeCCHHHHHHHHHHhhC
No 46
>6A4X_A Bleomycin resistance protein; VOC family, dioxygenase, dimer, Chartreusin, Oxidative Rearrangement, BIOSYNTHETIC PROTEIN; 1.63A {Streptomyces curacoi}
Probab=20.93 E-value=2.1e+02 Score=18.90 Aligned_cols=18 Identities=22% Similarity=0.416 Sum_probs=0.0 Template_Neff=11.500
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.|.+|..+++|
T Consensus 13 ~~v~d~~~~~~fy~~~lG 30 (130)
T 6A4X_A 13 VAAHDKKASARFLADILG 30 (130)
T ss_dssp EEESSHHHHHHHHHHHHT
T ss_pred EEcCCHHHHHHHHHHhhC
No 47
>3RRI_B Glyoxalase/bleomycin resistance protein/dioxygenase; Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, metalloprotein, METAL BINDING PROTEIN; HET: MSE; 1.5A {Alicyclobacillus acidocaldarius subsp. acidocaldarius}
Probab=20.78 E-value=2.1e+02 Score=17.79 Aligned_cols=18 Identities=17% Similarity=0.292 Sum_probs=0.0 Template_Neff=12.900
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.|.+|..+.+|
T Consensus 15 ~~~~d~~~~~~fy~~~lg 32 (135)
T 3RRI_B 15 IPARDLDEAYDFYVTKLG 32 (135)
T ss_dssp EEESCHHHHHCCCCCCTC
T ss_pred EEcCCHHHHHHHHHHccC
No 48
>3ZW5_B GLYOXALASE DOMAIN-CONTAINING PROTEIN 5; LYASE; HET: SO4; 1.6A {HOMO SAPIENS}
Probab=20.62 E-value=2.3e+02 Score=18.33 Aligned_cols=18 Identities=33% Similarity=0.466 Sum_probs=0.0 Template_Neff=12.500
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.+.+++.+.+|
T Consensus 33 l~v~d~~~~~~fy~~~lg 50 (147)
T 3ZW5_B 33 MTVKSIKDTTMFYSKILG 50 (147)
T ss_dssp EEESCHHHHHHHHHHHHC
T ss_pred EEeCCHHHHHHHHHHHhC
No 49
>5UJP_B Glyoxalase/bleomycin resisance protein/dioxygenase; Natural product enzyme, Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, Enzyme Discovery for Natural; HET: MES, MSE; 1.42A {Streptomyces sp. CB03234}
Probab=20.59 E-value=2.2e+02 Score=17.42 Aligned_cols=18 Identities=33% Similarity=0.418 Sum_probs=0.0 Template_Neff=12.500
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+...|.+|..+.+|
T Consensus 7 ~~~~d~~~~~~fy~~~lg 24 (114)
T 5UJP_B 7 VPVSDQEKAKDFYVETVG 24 (114)
T ss_dssp EECSCHHHHHCCCCCCSC
T ss_pred EEeCCHHHHHHHHHhccC
No 50
>PF19581.3 ; Glyoxalase_7 ; Glyoxalase superfamily protein
Probab=20.48 E-value=2.5e+02 Score=17.44 Aligned_cols=19 Identities=26% Similarity=0.328 Sum_probs=0.0 Template_Neff=12.800
Q ss_pred ceeeCCHHHHHHHHHHhcc
Q FD01849511_044 52 QVRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 52 ~vRV~t~~DAkalLkEa~G 70 (128)
.+.|.+.+.|.+|..+.+|
T Consensus 19 ~l~~~d~~~~~~fy~~~lg 37 (131)
T A9CI35_AGRFC/2 19 IVRIFDEAKAREFYVDFLG 37 (131)
T ss_pred EEEECCHHHHHHHHHHhhC
No 51
>PF08955.14 ; BofC_C ; BofC C-terminal domain
Probab=20.43 E-value=3.3e+02 Score=17.95 Aligned_cols=25 Identities=28% Similarity=0.473 Sum_probs=0.0 Template_Neff=9.000
Q ss_pred HHHHHHhcCCCccceeeCCHHHHHHHHHH
Q FD01849511_044 39 KAMQEAVGNGEKFQVRVESSTDAIAFLSE 67 (128)
Q Consensus 39 ~~~~~a~~~~~k~~vRV~t~~DAkalLkE 67 (128)
+..+..++++ |.+.|.+||.++|++
T Consensus 49 ~~~~~~l~~G----i~~~s~~e~~~~le~ 73 (76)
T D5WW86_KYRT2/1 49 KGALDSLRRG----VRVDGREDYASILDT 73 (76)
T ss_pred HHHHHHHHcC----ceeCCHHHHHHHHHh
No 52
>2I7R_A Conserved domain protein; structural genomics conserved domain, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, STRUCTURAL GENOMICS; HET: MSE; 2.2A {Streptococcus pneumoniae} SCOP: d.32.1.2
Probab=20.35 E-value=2.5e+02 Score=16.85 Aligned_cols=18 Identities=17% Similarity=0.084 Sum_probs=0.0 Template_Neff=13.000
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.+.++..+.+|
T Consensus 11 l~~~d~~~~~~fy~~~lg 28 (118)
T 2I7R_A 11 IIVSNVPQVCADLEHILD 28 (118)
T ss_dssp EECSCHHHHHHHHHHHHT
T ss_pred EEeCCHHHHHHHHHHHhc
No 53
>1XQA_B Glyoxalase/Bleomycin resistance protein; Dioxygenase, Glyoxalase/Bleomycin resistance, structural genomics, Midwest Center for Structural Genomics, MCSG, Protein Structure Initiative, PSI, UNKNOWN; HET: P6G, MSE; 1.8A {Bacillus cereus ATCC 14579} SCOP: d.32.1.2
Probab=20.10 E-value=2.6e+02 Score=16.83 Aligned_cols=18 Identities=28% Similarity=0.342 Sum_probs=0.0 Template_Neff=12.800
Q ss_pred eeeCCHHHHHHHHHHhcc
Q FD01849511_044 53 VRVESSTDAIAFLSEAQG 70 (128)
Q Consensus 53 vRV~t~~DAkalLkEa~G 70 (128)
+.|.+.+.+.+|..+.+|
T Consensus 9 ~~~~d~~~~~~fy~~~lg 26 (113)
T 1XQA_B 9 LTVADVVAAREFLEKYFG 26 (113)
T ss_dssp EEESCHHHHHHHHHHHHC
T ss_pred EEeCCHHHHHHHHHHhhC
No 54
>PF20955.1 ; Caud_bapl16_4th ; Phage tail base-plate attachment protein C-terminal barrel domain
Probab=20.07 E-value=97 Score=26.43 Aligned_cols=27 Identities=22% Similarity=0.313 Sum_probs=0.0 Template_Neff=2.400
Q ss_pred chhhcccccccccccccceeeecCC-cccee
Q FD01849511_044 94 YEQHMRSAQEEGFLDLSHVKYYNNG-TDGHI 123 (128)
Q Consensus 94 YE~H~~~~~E~~vnDL~HIKwyn~~-~~GHI 123 (128)
|-|+. -.++-||||-.| ||+|. -+|||
T Consensus 108 FNQ~~--L~pL~VNDLV~i-wY~G~~Y~GyI 135 (156)
T C7T1V4_9CAUD/2 108 FNQNE--LLPLYVNDLVDI-WYEGKLYSGYI 135 (156)
T ss_pred ecCCc--ccceeecceeeE-eECCeeeeeee