Query FD01851563_04358 RHS repeat family protein
Match_columns 89
No_of_seqs 106 out of 243
Neff 5.17805
Searched_HMMs 86581
Date Tue Feb 27 19:30:32 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/8075339.hhr -oa3m ../results/8075339.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 7UIO_Bo Mediator of RNA polyme 97.8 2.5E-05 2.8E-10 70.9 2.3 65 1-84 922-992 (1081)
2 7CEI_B PROTEIN (COLICIN E7 IMM 97.5 0.00054 6.3E-09 47.3 5.5 76 3-86 128-204 (206)
3 5EW5_A Colicin-E9; colicin, co 97.4 0.00021 2.5E-09 60.3 3.0 75 4-86 505-580 (582)
4 3ZFK_B COLICIN-E7; HYDROLASE, 95.1 0.29 3.4E-06 28.2 6.1 80 1-88 55-135 (135)
5 2GYK_F Colicin-E9; PROTEIN-PRO 94.8 0.37 4.3E-06 27.4 5.8 79 1-87 54-133 (134)
6 PF21431.1 ; Col-Pyo_DNase ; Co 94.5 0.5 5.8E-06 25.9 5.8 78 1-86 46-124 (124)
7 6W0V_A Pyocin S8; protein anti 93.0 0.3 3.4E-06 27.0 3.1 76 1-84 49-125 (125)
8 4QKO_H Pyocin-S2; HNH Nuclease 91.2 2.3 2.7E-05 24.0 5.4 79 1-87 53-132 (134)
9 4UHQ_B LARGE COMPONENT OF PYOC 88.9 4.1 4.8E-05 23.4 5.3 78 1-86 49-127 (136)
10 PF15637.10 ; Tox-HNH-HHH ; HNH 86.1 2.1 2.4E-05 26.6 3.1 31 2-33 27-57 (103)
11 6GHC_A 5-methylcytosine-specif 84.7 1.9 2.2E-05 32.7 2.8 35 52-88 235-269 (287)
12 8FLI_B Maturase reverse transc 84.1 2.7 3.1E-05 33.4 3.5 44 43-88 507-550 (562)
13 5H0M_A HNH endonuclease; Therm 82.6 1.4 1.7E-05 28.0 1.3 41 43-85 80-122 (130)
14 PF13392.10 ; HNH_3 ; HNH endon 69.0 14 0.00016 20.8 2.8 31 47-83 23-55 (55)
15 7ENH_A CRISPR-associated endon 68.7 8.8 0.0001 26.9 2.3 31 51-83 72-102 (166)
16 8H2H_D Group II intron-encoded 65.4 11 0.00013 31.0 2.5 37 51-88 554-598 (599)
17 5MKW_B DNA annealing helicase 64.6 8.5 9.8E-05 26.5 1.5 38 47-85 67-104 (122)
18 5ZMM_E Uncharacterized protein 63.4 17 0.00019 30.2 3.2 35 52-88 505-539 (561)
19 PF05766.16 ; NinG ; Bacterioph 62.4 9.3 0.00011 27.6 1.5 34 52-86 109-143 (197)
20 8CTL_D IscB; CRISPR, IscB, HEA 57.9 9.3 0.00011 32.5 1.0 34 52-87 243-276 (496)
21 PF13391.10 ; HNH_2 ; HNH endon 52.3 34 0.00039 17.9 2.3 43 45-88 3-58 (62)
22 6GHS_A TagI restriction endonu 48.9 28 0.00032 25.8 2.1 35 52-88 225-261 (311)
23 PF09665.14 ; RE_Alw26IDE ; Typ 47.1 75 0.00087 28.1 4.6 66 2-83 213-287 (511)
24 6J9N_A CRISPR-associated endon 46.9 45 0.00052 22.9 2.8 30 52-83 78-107 (161)
25 8F43_A CRISPR-associated endon 44.1 49 0.00057 20.8 2.5 31 51-83 38-68 (111)
26 6YKF_A HNH endonuclease; PUA s 43.7 45 0.00051 24.6 2.5 34 52-87 220-256 (309)
27 PF18284.5 ; DNA_meth_N ; DNA m 42.0 83 0.00096 19.6 3.2 26 6-31 13-42 (57)
28 7RWK_B SAVED domain-containing 41.5 36 0.00041 26.8 1.8 33 53-86 43-85 (384)
29 PF13395.10 ; HNH_4 ; HNH endon 39.3 67 0.00078 15.1 2.1 30 52-83 19-48 (55)
30 PF05315.15 ; ICEA ; ICEA Prote 38.8 43 0.00049 25.8 1.8 33 49-83 108-146 (218)
31 7MPZ_A CRISPR-associated endon 36.0 65 0.00075 21.8 2.2 30 52-83 71-100 (154)
32 4OGE_A HNH endonuclease domain 35.2 63 0.00073 30.5 2.6 37 45-83 568-608 (1101)
33 PF14044.10 ; NETI ; NETI prote 34.7 77 0.00089 20.4 2.2 18 19-36 11-29 (56)
34 PF08906.15 ; T6SS_Tdi1_C ; T6S 33.5 1.1E+02 0.0013 18.6 2.7 29 54-84 38-66 (71)
35 7EL1_A CRISPR-associated endon 33.3 50 0.00058 30.7 1.7 31 51-83 552-582 (1053)
36 PF18502.5 ; Mrpl_C ; 54S ribos 32.2 1.1E+02 0.0012 22.5 2.8 26 6-31 22-51 (117)
37 7RWM_C SAVED domain-containing 31.3 66 0.00076 25.5 1.9 33 53-86 53-93 (385)
38 8HNT_A CRISPR-associated endon 29.7 52 0.0006 30.9 1.2 31 51-83 577-607 (1055)
39 4H9D_B HNH endonuclease; Struc 27.9 99 0.0011 19.2 1.9 36 51-88 49-84 (112)
40 5VGB_A CRISPR-associated endon 27.2 1.2E+02 0.0014 20.4 2.4 31 51-83 70-100 (142)
41 6KC8_A CRISPR-associated endon 25.4 73 0.00085 30.1 1.4 30 52-83 585-614 (1083)
42 5B2R_B CRISPR-associated endon 25.3 88 0.001 30.6 1.9 30 52-83 840-869 (1372)
43 6M0X_A CRISPR-associated endon 24.4 85 0.00099 29.7 1.6 30 52-83 596-625 (1122)
44 8D2L_A CRISPR-associated endon 23.3 90 0.001 29.7 1.5 30 52-83 587-616 (1138)
45 PF16784.9 ; HNHc_6 ; Putative 21.6 1.5E+02 0.0017 22.1 2.1 32 53-85 134-169 (198)
46 PF06147.15 ; DUF968 ; Protein 21.6 1.6E+02 0.0018 21.7 2.2 33 53-86 110-144 (171)
47 3M7K_A restriction endonucleas 21.2 1.5E+02 0.0018 19.4 1.9 28 51-83 88-115 (142)
48 PF06600.15 ; DUF1140 ; Protein 20.8 82 0.00095 22.3 0.6 9 2-10 45-53 (99)
No 1
>7UIO_Bo Mediator of RNA polymerase II transcription subunit 15; Divergent transcription, Mediator, RNA Polymerase II, PIC, Pre-Initiation, Activation, Transcription Factor, Gal4, Gal4VP16, TRANSCRIPTION; 3.3A {Saccharomyces cerevisiae S288C}
Probab=97.76 E-value=2.5e-05 Score=70.94 Aligned_cols=65 Identities=11% Similarity=-0.069 Sum_probs=56.9 Template_Neff=5.300
Q ss_pred ChhHHHHHHHh-cccccCCHHHHHHHHcCCCCcceeeeeecccCCcccccEEEEEEcCCCChhcCCCCCCh----hhceE
Q FD01851563_043 1 RRDYWKAEAKA-APKGMYSPVNMLRMRFGLAPKIRVKEFHFKTGTERTRNVSLELNHRYWPQRDGKHVDIP----YNLEK 75 (89)
Q Consensus 1 R~~~WK~~A~~-~~~~~fs~~Nl~rM~~G~AP~~~v~v~~~~~g~~~g~~~s~ELHH~~~p~~~GG~v~~~----~NL~~ 75 (89)
|+.+|+.+..+ .... |. .|+.+|..|.+|.. ..|+|||. .++..||.||++ +||.+
T Consensus 922 rkA~Wkav~qDp~l~s-fk-~Nk~iMksg~aP~r----------------~kyeIhh~-~~Is~gGdVYdi~~d~dnL~i 982 (1081)
T 7UIO_Bo 922 TKAAQRARDQDSIDIS-IK-DNKLVMKSKFNKSN----------------RSYSIALS-NVAAIFKGIGGNFKDLSTLVH 982 (1081)
T ss_pred cHHhHHHhhcCccceE-Ee-cchHHHhcccCCcc----------------ceeeeccc-ccHHhcCccccCCcchhhccc
Confidence 56899999988 6666 99 99999999999982 36999999 999999999999 99999
Q ss_pred CCh-HHHHhh
Q FD01851563_043 76 VTP-WEHAAK 84 (89)
Q Consensus 76 vtP-~~H~~i 84 (89)
.+| ..|..+
T Consensus 983 ~tp~k~h~~~ 992 (1081)
T 7UIO_Bo 983 SSSPSTSSNM 992 (1081)
T ss_pred cCCCCCCCCC
Confidence 999 888833
No 2
>7CEI_B PROTEIN (COLICIN E7 IMMUNITY PROTEIN); DNASE, E-GROUP COLICINS, PROTEIN-PROTEIN INTERACTION, PROTEIN RECOGNITION, IMMUNE SYSTEM; 2.3A {Escherichia coli str. K12 substr.} SCOP: d.4.1.1
Probab=97.51 E-value=0.00054 Score=47.31 Aligned_cols=76 Identities=29% Similarity=0.364 Sum_probs=55.9 Template_Neff=10.900
Q ss_pred hHHHHHHHh-cccccCCHHHHHHHHcCCCCcceeeeeecccCCcccccEEEEEEcCCCChhcCCCCCChhhceECChHHH
Q FD01851563_043 3 DYWKAEAKA-APKGMYSPVNMLRMRFGLAPKIRVKEFHFKTGTERTRNVSLELNHRYWPQRDGKHVDIPYNLEKVTPWEH 81 (89)
Q Consensus 3 ~~WK~~A~~-~~~~~fs~~Nl~rM~~G~AP~~~v~v~~~~~g~~~g~~~s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H 81 (89)
.+|...... .....|...+...+..+..+... .. ...+....++++|. .++..++.+|+++++.+.+|..|
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 199 (206)
T 7CEI_B 128 KFWEEVSKDPELSKQFSRNNNDRMKVGKAPKTR---TQ----DVSGKRTSFELHHE-KPISQNGGVYDMDNISVVTPKRH 199 (206)
T ss_dssp HHHHHHTTCTTTGGGSCHHHHHHHHTTCCCBCC---GG----GCBTTBCBCEEEES-SCSSSSCCSSBTTSEEEECHHHH
T ss_pred HHHHHHhcCHHHHhccChhhHHHHhcCCCCCCC---cc----ccCCCeeeeeeeCC-cchhcCCCeeecccceeeChhHH
Confidence 456666555 55567888888888888666531 00 12244567899999 99999999999999999999999
Q ss_pred HhhCC
Q FD01851563_043 82 AAKDP 86 (89)
Q Consensus 82 ~~id~ 86 (89)
..++.
T Consensus 200 i~~~~ 204 (206)
T 7CEI_B 200 IDIHR 204 (206)
T ss_dssp HHTC-
T ss_pred HHHhc
Confidence 87764
No 3
>5EW5_A Colicin-E9; colicin, complex, toxin, hydrolase; 3.2A {Escherichia coli}
Probab=97.41 E-value=0.00021 Score=60.33 Aligned_cols=75 Identities=21% Similarity=0.223 Sum_probs=55.8 Template_Neff=7.600
Q ss_pred HHHHHHHh-cccccCCHHHHHHHHcCCCCcceeeeeecccCCcccccEEEEEEcCCCChhcCCCCCChhhceECChHHHH
Q FD01851563_043 4 YWKAEAKA-APKGMYSPVNMLRMRFGLAPKIRVKEFHFKTGTERTRNVSLELNHRYWPQRDGKHVDIPYNLEKVTPWEHA 82 (89)
Q Consensus 4 ~WK~~A~~-~~~~~fs~~Nl~rM~~G~AP~~~v~v~~~~~g~~~g~~~s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~ 82 (89)
+|...... .....+...+...+..+..+... .. ...+....+...+. ..+..++.++.++++...++..++
T Consensus 505 ~w~~~~~~~e~~~~~~~~n~~~i~~G~~~~~~---~~----d~~gg~~~~e~~~~-~~ik~gg~vy~~d~l~i~tpk~~i 576 (582)
T 5EW5_A 505 VWEEVSKDPELSKNLNPSNKSSVSKGYSPFTP---KN----QQVGGRKVYELHHD-KPISQGGEVYDMDNIRVTTPKRHI 576 (582)
T ss_dssp HHHHHHTCTTTGGGCCHHHHHHHHTSCCCBCC---GG----GCBTTBCBCEEEES-SCTTTTCCSSBTTTEEEECHHHHH
T ss_pred HHHHHhcCHHHHhhcCcccchhccCCCCCCCC---hh----hccCceeeEEeecC-cccccCCCeechhhceecCcchhh
Confidence 34445555 55667788887778877666655 44 45555567778888 888899999999999999999998
Q ss_pred hhCC
Q FD01851563_043 83 AKDP 86 (89)
Q Consensus 83 ~id~ 86 (89)
..+.
T Consensus 577 ~~~~ 580 (582)
T 5EW5_A 577 DIHR 580 (582)
T ss_dssp HHCC
T ss_pred hhcc
Confidence 7764
No 4
>3ZFK_B COLICIN-E7; HYDROLASE, ARTIFICIAL METALLONUCLEASE, ALLOSTERIC CONTROL; HET: SO4, ACT; 1.7A {ESCHERICHIA COLI} SCOP: d.4.1.1, l.1.1.1
Probab=95.12 E-value=0.29 Score=28.23 Aligned_cols=80 Identities=29% Similarity=0.365 Sum_probs=0.0 Template_Neff=13.900
Q ss_pred ChhHHHHHHHh-cccccCCHHHHHHHHcCCCCcceeeeeecccCCcccccEEEEEEcCCCChhcCCCCCChhhceECChH
Q FD01851563_043 1 RRDYWKAEAKA-APKGMYSPVNMLRMRFGLAPKIRVKEFHFKTGTERTRNVSLELNHRYWPQRDGKHVDIPYNLEKVTPW 79 (89)
Q Consensus 1 R~~~WK~~A~~-~~~~~fs~~Nl~rM~~G~AP~~~v~v~~~~~g~~~g~~~s~ELHH~~~p~~~GG~v~~~~NL~~vtP~ 79 (89)
+..+|.....+ ....++...++..+..|..+... ..... +....+.+++. .....++.+++++++.+.++.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 126 (135)
T 3ZFK_B 55 RKKFWEEVSKDPELSKQFSRNNNDRMKVGKAPKTR---TQDVS----GKRTSFELHHE-KPISQNGGVYDMDNISVVTPK 126 (135)
T ss_dssp HHHHHHHHHHCHHHHTTSCHHHHHHHHTTCCCBCC---GGGCB----TTBCBCEEEES-SCGGGTCCSSBGGGEEEECHH
T ss_pred HHHHHHHHhcCHHHHhccCHHHHHHHhcCCCCCCC---ccccC----CCeEEEEEecC-ccHHhCCCccccccceEcChH
Q ss_pred HHHhhCCCC
Q FD01851563_043 80 EHAAKDPYR 88 (89)
Q Consensus 80 ~H~~id~~R 88 (89)
.+..++...
T Consensus 127 ~~~~~~~~~ 135 (135)
T 3ZFK_B 127 RHIDIHQVN 135 (135)
T ss_dssp HHHHHC---
T ss_pred HHHHHhcCC
No 5
>2GYK_F Colicin-E9; PROTEIN-PROTEIN COMPLEX, 4-HELIX BUNDLE, DNASE DOMAIN, HNH-MOTIF, antibiotic-antibiotic inhibitor COMPLEX; HET: PO4; 1.6A {Escherichia coli K12} SCOP: d.4.1.1
Probab=94.80 E-value=0.37 Score=27.39 Aligned_cols=79 Identities=22% Similarity=0.221 Sum_probs=0.0 Template_Neff=14.200
Q ss_pred ChhHHHHHHHh-cccccCCHHHHHHHHcCCCCcceeeeeecccCCcccccEEEEEEcCCCChhcCCCCCChhhceECChH
Q FD01851563_043 1 RRDYWKAEAKA-APKGMYSPVNMLRMRFGLAPKIRVKEFHFKTGTERTRNVSLELNHRYWPQRDGKHVDIPYNLEKVTPW 79 (89)
Q Consensus 1 R~~~WK~~A~~-~~~~~fs~~Nl~rM~~G~AP~~~v~v~~~~~g~~~g~~~s~ELHH~~~p~~~GG~v~~~~NL~~vtP~ 79 (89)
+..+|...... ....++...++..+..|..+... ..... +......+++. .....++.+++++++.+.++.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 125 (134)
T 2GYK_F 54 RKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTP---KNQQV----GGRKVYELHHD-KPISQGGEVYDMDNIRVTTPK 125 (134)
T ss_dssp HHHHHHHHHHCHHHHTTSCHHHHHHHHTTCCCBCC---GGGCB----TTBCBCEEEES-SCGGGTCCSSBGGGEEEECHH
T ss_pred HHHHHHHHhhChHHHhcCChhHHHHhcCCCCCCCC---ccccc----CCEEEEEEecC-CCHHhCCceechhhceEcChh
Q ss_pred HHHhhCCC
Q FD01851563_043 80 EHAAKDPY 87 (89)
Q Consensus 80 ~H~~id~~ 87 (89)
....+...
T Consensus 126 ~~~~~~~~ 133 (134)
T 2GYK_F 126 RHIDIHRG 133 (134)
T ss_dssp HHHHHHCC
T ss_pred HHHHHhcC
No 6
>PF21431.1 ; Col-Pyo_DNase ; Colicin/Pyocin-S2, DNase domain
Probab=94.54 E-value=0.5 Score=25.94 Aligned_cols=78 Identities=22% Similarity=0.263 Sum_probs=0.0 Template_Neff=14.600
Q ss_pred ChhHHHHHHHh-cccccCCHHHHHHHHcCCCCcceeeeeecccCCcccccEEEEEEcCCCChhcCCCCCChhhceECChH
Q FD01851563_043 1 RRDYWKAEAKA-APKGMYSPVNMLRMRFGLAPKIRVKEFHFKTGTERTRNVSLELNHRYWPQRDGKHVDIPYNLEKVTPW 79 (89)
Q Consensus 1 R~~~WK~~A~~-~~~~~fs~~Nl~rM~~G~AP~~~v~v~~~~~g~~~g~~~s~ELHH~~~p~~~GG~v~~~~NL~~vtP~ 79 (89)
+..+|...... ....++...++.....|..+... ..... +.....++++. .....++.+++++++...++.
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 117 (124)
T B2VB98_ERWT9/5 46 RKAFWQEVSKDPALGKQFNNQNRTNIKNGKSPFVP---ESERV----GSRQRYELHHV-KQIKDNGAVYDVDNLGIMTPR 117 (124)
T ss_pred HHHHHHHHHhChHHhhccCHHHHHHHhCCCCCCCC---hhhcc----CCeeeEEEece-ecHHhCCCccChhhceEcChh
Q ss_pred HHHhhCC
Q FD01851563_043 80 EHAAKDP 86 (89)
Q Consensus 80 ~H~~id~ 86 (89)
.+..+..
T Consensus 118 ~~~~~~~ 124 (124)
T B2VB98_ERWT9/5 118 RHIDIHK 124 (124)
T ss_pred HHHhhcC
No 7
>6W0V_A Pyocin S8; protein antibiotic, H-H-N DNase, toxin, ANTIMICROBIAL PROTEIN; 1.381A {Pseudomonas aeruginosa} SCOP: d.4.1.0
Probab=93.05 E-value=0.3 Score=27.04 Aligned_cols=76 Identities=24% Similarity=0.224 Sum_probs=0.0 Template_Neff=14.500
Q ss_pred ChhHHHHHHHh-cccccCCHHHHHHHHcCCCCcceeeeeecccCCcccccEEEEEEcCCCChhcCCCCCChhhceECChH
Q FD01851563_043 1 RRDYWKAEAKA-APKGMYSPVNMLRMRFGLAPKIRVKEFHFKTGTERTRNVSLELNHRYWPQRDGKHVDIPYNLEKVTPW 79 (89)
Q Consensus 1 R~~~WK~~A~~-~~~~~fs~~Nl~rM~~G~AP~~~v~v~~~~~g~~~g~~~s~ELHH~~~p~~~GG~v~~~~NL~~vtP~ 79 (89)
+..+|...... .....+...++..+..|..+... ..... +......++|. .....++.+++++++...++.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 120 (125)
T 6W0V_A 49 REQFWVAVANDPELVKYFRKTNAKGMRDGLSPFTP---KAEQA----GGRDKYAIHHV-VQISQGGAVYDIDNLRVMTPK 120 (125)
T ss_dssp HHHHHHHHHTCHHHHTTSCHHHHHHHHTTCCCBCC---GGGCB----TTBCBCEEEES-SCGGGTCCTTBGGGEEEECHH
T ss_pred HHHHHHHHhcCHHHHhhcchhhHhhhhcCCCCCCC---hhhhc----CCeeeeeEecc-eeHHhCCCeeecccceEcCcc
Q ss_pred HHHhh
Q FD01851563_043 80 EHAAK 84 (89)
Q Consensus 80 ~H~~i 84 (89)
....+
T Consensus 121 ~~~~~ 125 (125)
T 6W0V_A 121 MHIQV 125 (125)
T ss_dssp HHTTC
T ss_pred hhccC
No 8
>4QKO_H Pyocin-S2; HNH Nuclease Domain, Colicin Nuclease Immunity Protein Complex, Bacteriocin, Bacterial Cytotoxin, ANTIMICROBIAL PROTEIN; HET: BR; 1.8A {Pseudomonas aeruginosa} SCOP: d.4.1.0
Probab=91.17 E-value=2.3 Score=24.04 Aligned_cols=79 Identities=28% Similarity=0.335 Sum_probs=0.0 Template_Neff=14.200
Q ss_pred ChhHHHHHHHh-cccccCCHHHHHHHHcCCCCcceeeeeecccCCcccccEEEEEEcCCCChhcCCCCCChhhceECChH
Q FD01851563_043 1 RRDYWKAEAKA-APKGMYSPVNMLRMRFGLAPKIRVKEFHFKTGTERTRNVSLELNHRYWPQRDGKHVDIPYNLEKVTPW 79 (89)
Q Consensus 1 R~~~WK~~A~~-~~~~~fs~~Nl~rM~~G~AP~~~v~v~~~~~g~~~g~~~s~ELHH~~~p~~~GG~v~~~~NL~~vtP~ 79 (89)
+..+|.....+ .....+...++..+..|..+... ..... +......+++. .....++.+++.+++.+.++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 124 (134)
T 4QKO_H 53 REQFWIAVANDPELSKQFNPGSLAVMRDGGAPYVR---ESEQA----GGRIKIEIHHK-VRIADGGGVYNMGNLVAVTPK 124 (134)
T ss_dssp HHHHHHHHHHCHHHHTTSCHHHHHHHTTTCCCBCC---GGGCB----TTBCBCEEEES-SCGGGTCCSSBGGGEEEECHH
T ss_pred HHHHHHHHhcChhHhhcCCHHHHHHHhcCCCCCCC---hhhcc----CCeeEEEEece-ecHHHCCCeeeccceEEeChH
Q ss_pred HHHhhCCC
Q FD01851563_043 80 EHAAKDPY 87 (89)
Q Consensus 80 ~H~~id~~ 87 (89)
....+...
T Consensus 125 ~~~~~~~~ 132 (134)
T 4QKO_H 125 RHIEIHKG 132 (134)
T ss_dssp HHHHHTC-
T ss_pred HHHHHhcC
No 9
>4UHQ_B LARGE COMPONENT OF PYOCIN AP41; HYDROLASE, BACTERIOCIN, DNASE, PYOCIN; HET: CIT; 1.5A {PSEUDOMONAS AERUGINOSA} SCOP: d.4.1.0
Probab=88.88 E-value=4.1 Score=23.41 Aligned_cols=78 Identities=27% Similarity=0.296 Sum_probs=0.0 Template_Neff=13.900
Q ss_pred ChhHHHHHHHh-cccccCCHHHHHHHHcCCCCcceeeeeecccCCcccccEEEEEEcCCCChhcCCCCCChhhceECChH
Q FD01851563_043 1 RRDYWKAEAKA-APKGMYSPVNMLRMRFGLAPKIRVKEFHFKTGTERTRNVSLELNHRYWPQRDGKHVDIPYNLEKVTPW 79 (89)
Q Consensus 1 R~~~WK~~A~~-~~~~~fs~~Nl~rM~~G~AP~~~v~v~~~~~g~~~g~~~s~ELHH~~~p~~~GG~v~~~~NL~~vtP~ 79 (89)
+..+|...... .....+...++..+..|..+... ..... +......+++. .....++.+++++++...++.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 120 (136)
T 4UHQ_B 49 REQFWMAVSKDPSALENLSPSNRYFVSQGLAPYAV---PEEHL----GSKEKFEIHHV-VPLESGGALYNIDNLVIVTPK 120 (136)
T ss_dssp HHHHHHHHHTCHHHHTTSCHHHHHHHHTTCCCBCC---GGGCB----TTBCBCEEEES-SCGGGTCCSSBGGGEEEECHH
T ss_pred HHHHHHHHhcCHHHHhcCCHHHHHHHHcCCCCCCC---cchhc----CCceeeeeeee-ccHHhCCCccccccceEcChH
Q ss_pred HHHhhCC
Q FD01851563_043 80 EHAAKDP 86 (89)
Q Consensus 80 ~H~~id~ 86 (89)
....+..
T Consensus 121 ~~~~~~~ 127 (136)
T 4UHQ_B 121 RHSEIHK 127 (136)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
No 10
>PF15637.10 ; Tox-HNH-HHH ; HNH/Endo VII superfamily nuclease toxin with a HHH motif
Probab=86.15 E-value=2.1 Score=26.60 Aligned_cols=31 Identities=26% Similarity=0.445 Sum_probs=0.0 Template_Neff=10.600
Q ss_pred hhHHHHHHHhcccccCCHHHHHHHHcCCCCcc
Q FD01851563_043 2 RDYWKAEAKAAPKGMYSPVNMLRMRFGLAPKI 33 (89)
Q Consensus 2 ~~~WK~~A~~~~~~~fs~~Nl~rM~~G~AP~~ 33 (89)
..||+.... ..+..||..|+.++..|.+|.+
T Consensus 27 ~~~~~~~~~-~~~~~~s~~n~~~i~~g~~p~v 57 (103)
T H3SNR9_9BACL/5 27 KKFFKELLK-RNPEFWSEKNTSEIRRGRAPEV 57 (103)
T ss_pred HHHHHHHHH-hCHHHcCHHHHHHHHCCCCCCC
No 11
>6GHC_A 5-methylcytosine-specific restriction enzyme A; HNH ENDONUCLEASE, MODIFICATION DEPENDENT RESTRICTION, 5-METHYLCYTOSINE, 5MC, 5-HYDROXYMETHYLCYTOSINE, 5HMC, BBA-ME NUCLEASE, ScoMcrA, HYDROLASE; 2.85A {Escherichia coli (strain K12)}
Probab=84.67 E-value=1.9 Score=32.67 Aligned_cols=35 Identities=26% Similarity=0.277 Sum_probs=0.0 Template_Neff=9.600
Q ss_pred EEEEcCCCChhcCCCCCChhhceECChHHHHhhCCCC
Q FD01851563_043 52 LELNHRYWPQRDGKHVDIPYNLEKVTPWEHAAKDPYR 88 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~id~~R 88 (89)
+|.||+ .|...+|. ...+|+..+.|..|..++..+
T Consensus 235 le~hHi-~~~~~~g~-~~~~N~~~lcp~ch~~~h~~~ 269 (287)
T 6GHC_A 235 LEVHHV-IPLSSGGA-DTTDNCVALCPNCHRELHYSK 269 (287)
T ss_dssp CEEEES-SCTTTTCC-BSGGGEEEECHHHHHHHHHCS
T ss_pred eEEEEE-EehhhCCC-CcHHhEEEeCHHHHHHHhccc
No 12
>8FLI_B Maturase reverse transcriptase; group II intron, splicing, branching, maturase, SPLICING-RNA complex;{Thermosynechococcus vestitus}
Probab=84.09 E-value=2.7 Score=33.44 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=0.0 Template_Neff=11.400
Q ss_pred CCcccccEEEEEEcCCCChhcCCCCCChhhceECChHHHHhhCCCC
Q FD01851563_043 43 GTERTRNVSLELNHRYWPQRDGKHVDIPYNLEKVTPWEHAAKDPYR 88 (89)
Q Consensus 43 g~~~g~~~s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~id~~R 88 (89)
|.........++||+ .|...||. ...+||..+.+..|..++...
T Consensus 507 ~~~~~~~~~~~~hhi-~~~~~~~~-~~~~n~~~lc~~ch~~~~~~~ 550 (562)
T 8FLI_B 507 GGEIEQDMLTEIHHI-LPKHKGGS-DDLDNLVLIHANCHKQVHSRD 550 (562)
T ss_dssp ----------------------------------------------
T ss_pred CCccCccCcEEEEec-eecccCCC-CchhheeEeCHHHHHHHcccC
No 13
>5H0M_A HNH endonuclease; Thermophilic bacteriophage, HNH Endonuclease, DNA nicking, HYDROLASE; 1.52A {Geobacillus virus E2}
Probab=82.60 E-value=1.4 Score=28.05 Aligned_cols=41 Identities=20% Similarity=0.059 Sum_probs=0.0 Template_Neff=11.100
Q ss_pred CCcccccEEEEEEcCCCChhc--CCCCCChhhceECChHHHHhhC
Q FD01851563_043 43 GTERTRNVSLELNHRYWPQRD--GKHVDIPYNLEKVTPWEHAAKD 85 (89)
Q Consensus 43 g~~~g~~~s~ELHH~~~p~~~--GG~v~~~~NL~~vtP~~H~~id 85 (89)
|.........++||+ .+... ++. ++.+||..+...-|..++
T Consensus 80 ~~~~~~~~~~~~~Hi-~~~~~~~~~~-~~~~nl~~lc~~ch~~~~ 122 (130)
T 5H0M_A 80 LKEKKITRAVIVDHI-TPLLVDWSKR-LDMDNLQSLCQACHNRKT 122 (130)
T ss_dssp HHTTCCCBCCEEEES-SCTTTCGGGT-TCGGGEEEECHHHHHHHH
T ss_pred chhcCCCceEEeeee-eecccCHHHc-CChhHHHhhcHHHHHHHh
No 14
>PF13392.10 ; HNH_3 ; HNH endonuclease
Probab=69.01 E-value=14 Score=20.78 Aligned_cols=31 Identities=19% Similarity=0.146 Sum_probs=0.0 Template_Neff=9.700
Q ss_pred cccEEEEEEcCCCChhcCCC--CCChhhceECChHHHHh
Q FD01851563_043 47 TRNVSLELNHRYWPQRDGKH--VDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 47 g~~~s~ELHH~~~p~~~GG~--v~~~~NL~~vtP~~H~~ 83 (89)
+....+.++|+ .|. -++++||..++..+|..
T Consensus 23 ~~~~~~~v~H~------d~~~~~~~~~NL~~~~~~~~~~ 55 (55)
T Q84408_PBCV1/3 23 GKTHHLIVDHI------DDDKQNARLDNLQLLTNQENSK 55 (55)
T ss_pred CCceeEEEeee------cCCCccCCHHHeEEccHHHhcC
No 15
>7ENH_A CRISPR-associated endonuclease Cas9; Inhibitor, Complex, VIRAL PROTEIN; HET: NI; 2.097A {Staphylococcus aureus}
Probab=68.69 E-value=8.8 Score=26.86 Aligned_cols=31 Identities=19% Similarity=0.123 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred EEEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 51 SLELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 51 s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
.++++|+ .|.+.++. ++++|+..+.+..+..
T Consensus 72 ~~~idHi-iP~s~~~~-~~~~N~~l~~~~~n~~ 102 (166)
T 7ENH_A 72 NYEVDHI-IPRSVSFD-NSFNNKVLVKQEENSK 102 (166)
T ss_dssp GEEEEES-SCHHHHCC-CSGGGEEEEEHHHHHH
T ss_pred ceeeeee-eeccccCC-CchhceEEecHHHHHH
No 16
>8H2H_D Group II intron-encoded protein LtrA; intron, RNA BINDING PROTEIN-RNA COMPLEX; 3.2A {Lactococcus lactis}
Probab=65.42 E-value=11 Score=30.96 Aligned_cols=37 Identities=16% Similarity=-0.128 Sum_probs=0.0 Template_Neff=10.700
Q ss_pred EEEEEcCCCChhcCCCCCChhhc--------eECChHHHHhhCCCC
Q FD01851563_043 51 SLELNHRYWPQRDGKHVDIPYNL--------EKVTPWEHAAKDPYR 88 (89)
Q Consensus 51 s~ELHH~~~p~~~GG~v~~~~NL--------~~vtP~~H~~id~~R 88 (89)
..|+||+ .+.+.++.....+|+ ..+.+..|..++..+
T Consensus 554 ~~~~hHi-~~~~~~~~~~~~~~~~~~~~~~~~~lc~~Ch~~~~~~~ 598 (599)
T 8H2H_D 554 SYEIHHV-NKVKNLKGKEKWEMAMIAKQRKTLVVCFHCHRHVIHKH 598 (599)
T ss_dssp CCCCEEC-SCSTTCCSSSSSTTTHHHHTCSEECCCTTTCCCCCTSC
T ss_pred cceEEeh-hhhhcccCcchHHHHHHHHhCCceeeCHHHHHHHhcCC
No 17
>5MKW_B DNA annealing helicase and endonuclease ZRANB3; endonuclease, metalloprotein, zinc-binding, DNA-binding, HYDROLASE; HET: GOL; 2.0A {Homo sapiens}
Probab=64.61 E-value=8.5 Score=26.48 Aligned_cols=38 Identities=16% Similarity=0.095 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred cccEEEEEEcCCCChhcCCCCCChhhceECChHHHHhhC
Q FD01851563_043 47 TRNVSLELNHRYWPQRDGKHVDIPYNLEKVTPWEHAAKD 85 (89)
Q Consensus 47 g~~~s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~id 85 (89)
+.....+++|. .+...||..++.+|+..+.+..|...+
T Consensus 67 ~~~~~~~v~h~-~~~~~gg~~~~~~n~~~lc~~c~~~~~ 104 (122)
T 5MKW_B 67 GEGHFWQVDHI-KPVYGGGGQCSLDNLQTLCTVCHKERT 104 (122)
T ss_dssp CGGGTEEEEES-SCCTTSCCCCSGGGEEEEEHHHHHHHH
T ss_pred CCCCceeeccc-ccccCCCCCCCHHHHHHhhHHHHHHHh
No 18
>5ZMM_E Uncharacterized protein McrA; Type IV restriction endonuclease, DNA Phosphorothioation, DNA BINDING PROTEIN; HET: SO4; 3.15A {Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)}
Probab=63.44 E-value=17 Score=30.21 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred EEEEcCCCChhcCCCCCChhhceECChHHHHhhCCCC
Q FD01851563_043 52 LELNHRYWPQRDGKHVDIPYNLEKVTPWEHAAKDPYR 88 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~id~~R 88 (89)
++.||+ .+...+|. ....|+..+.|..|..++...
T Consensus 505 le~~hi-~~~~~~~~-~~~~n~~~lc~~ch~~~~~~~ 539 (561)
T 5ZMM_E 505 LQVDHV-NDLAKGGP-DVPWNMIALCPNCHALKTYGA 539 (561)
T ss_dssp CEEEES-SCGGGTCC-SSGGGEEEECHHHHHHHHHBT
T ss_pred EEEEee-ehHHhCCC-CChhhcEeeCHHHHHHHhcCc
No 19
>PF05766.16 ; NinG ; Bacteriophage Lambda NinG protein
Probab=62.44 E-value=9.3 Score=27.58 Aligned_cols=34 Identities=6% Similarity=-0.187 Sum_probs=0.0 Template_Neff=9.300
Q ss_pred EEEEcCCCChhcCCC-CCChhhceECChHHHHhhCC
Q FD01851563_043 52 LELNHRYWPQRDGKH-VDIPYNLEKVTPWEHAAKDP 86 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~-v~~~~NL~~vtP~~H~~id~ 86 (89)
++.||. .|.+..+. .++++||..+.+.-|...+.
T Consensus 109 ~~~~Hi-~~~~~~~~~~~~~~N~~~lC~~Ch~~~~~ 143 (197)
T A0A2U2GVX8_YER 109 YHAGHY-LTVGANPELRFNEDNCHRQCAPCNNHLSG 143 (197)
T ss_pred ceeccc-cCcCCChhhcCChhhcHHhCHHHHhhccC
No 20
>8CTL_D IscB; CRISPR, IscB, HEARO RNA, omega RNA, RNA BINDING PROTEIN-RNA-DNA complex; 3.1A {synthetic construct}
Probab=57.86 E-value=9.3 Score=32.52 Aligned_cols=34 Identities=15% Similarity=0.053 Sum_probs=0.0 Template_Neff=7.800
Q ss_pred EEEEcCCCChhcCCCCCChhhceECChHHHHhhCCC
Q FD01851563_043 52 LELNHRYWPQRDGKHVDIPYNLEKVTPWEHAAKDPY 87 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~id~~ 87 (89)
+++||+ .|.+.||. .+++||..+.+..|...+..
T Consensus 243 ~~v~HI-ip~s~~g~-~~~~Nlv~lC~~Cn~~k~~~ 276 (496)
T 8CTL_D 243 DHYHHV-VPRRKNGS-ETLENRVGLCEEHHRLVHTD 276 (496)
T ss_dssp ------------------------------------
T ss_pred cCccce-eehhcCCC-CCchhhHHhcHHHHHHHcCC
No 21
>PF13391.10 ; HNH_2 ; HNH endonuclease
Probab=52.27 E-value=34 Score=17.91 Aligned_cols=43 Identities=14% Similarity=-0.083 Sum_probs=0.0 Template_Neff=12.000
Q ss_pred cccccEE-EEEEcCCCChhcCC------------CCCChhhceECChHHHHhhCCCC
Q FD01851563_043 45 ERTRNVS-LELNHRYWPQRDGK------------HVDIPYNLEKVTPWEHAAKDPYR 88 (89)
Q Consensus 45 ~~g~~~s-~ELHH~~~p~~~GG------------~v~~~~NL~~vtP~~H~~id~~R 88 (89)
..|.... .+..|. .|...++ .+++..|+..+.+.-|...|..+
T Consensus 3 ~~g~~~~~~~~ahi-~~~~~~~~~~~~~~~~~~~~~~~~~N~i~l~~~~~~~fd~~~ 58 (62)
T Q5KQA0_CRYNJ/1 3 VSGAHWESCTASHI-VPASRPDIYDCFYGDGGGLPMFRPSAGLLLRDDLHHAFDRLM 58 (62)
T ss_pred ccCCcccceeEEEE-ecccchhhhhhhcCCCCCCCCCChHHhEEECchHHHHhhcCC
No 22
>6GHS_A TagI restriction endonuclease; RESTRICTION ENDONUCLEASE, TYPE II, TYPE IV, CYTOSINE MODIFICATION, 5-METHYLCYTOSINE, 5MC, 5-HYDROXYMETHYLCYTOSINE, 5HMC, SRA, HNH, BBA-ME NUCLEASE; 2.92A {Thermocrispum agreste}
Probab=48.92 E-value=28 Score=25.82 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=0.0 Template_Neff=11.000
Q ss_pred EEEEcCCCChhc--CCCCCChhhceECChHHHHhhCCCC
Q FD01851563_043 52 LELNHRYWPQRD--GKHVDIPYNLEKVTPWEHAAKDPYR 88 (89)
Q Consensus 52 ~ELHH~~~p~~~--GG~v~~~~NL~~vtP~~H~~id~~R 88 (89)
.+.||+ .+... +|. .+..|+..+.|..|..+|.+.
T Consensus 225 l~~~hi-~~~~~~~~~~-~~~~n~~~lc~~~h~~~~~~~ 261 (311)
T 6GHS_A 225 SQGAHI-RPLGRKHGGP-DVESNMLCLCPNDHVRFDNGA 261 (311)
T ss_dssp CEEEES-SCCSTTTCCC-CSGGGEEEECHHHHHHHHTTS
T ss_pred eeeEEE-eeCCcCCCCC-CchhhEEEeCCchHHhhhCCC
No 23
>PF09665.14 ; RE_Alw26IDE ; Type II restriction endonuclease (RE_Alw26IDE)
Probab=47.07 E-value=75 Score=28.06 Aligned_cols=66 Identities=11% Similarity=-0.100 Sum_probs=0.0 Template_Neff=6.300
Q ss_pred hhHHHHHHHh--cccccCCHHHHHHH-------HcCCCCcceeeeeecccCCcccccEEEEEEcCCCChhcCCCCCChhh
Q FD01851563_043 2 RDYWKAEAKA--APKGMYSPVNMLRM-------RFGLAPKIRVKEFHFKTGTERTRNVSLELNHRYWPQRDGKHVDIPYN 72 (89)
Q Consensus 2 ~~~WK~~A~~--~~~~~fs~~Nl~rM-------~~G~AP~~~v~v~~~~~g~~~g~~~s~ELHH~~~p~~~GG~v~~~~N 72 (89)
+.|++....- ...+.++..+.... +.+..-..- |. ..++++|+ .|.+.||. ++++|
T Consensus 213 r~y~~~RRa~e~~~~g~~~~a~~~~~~~~~~~~~~~~~C~~C------------G~-~~l~vDHI-iPis~GG~-~~~~N 277 (511)
T Q1ATV9_RUBXD/1 213 QSYTTDRRVFEYWVDGDWVAADRLMGIIRSDDELKREPCLNG------------HP-GPCSADHI-GPISLGFA-HRPEF 277 (511)
T ss_pred HHHhHhHHHHHhcCCCCccHHHHHHhhhcCCchHHCCCCCCC------------CC-CCceeccc-cchhhCCC-CCchh
Q ss_pred ceECChHHHHh
Q FD01851563_043 73 LEKVTPWEHAA 83 (89)
Q Consensus 73 L~~vtP~~H~~ 83 (89)
..+....|..
T Consensus 278 -~~lC~~CNs~ 287 (511)
T Q1ATV9_RUBXD/1 278 -QFLCKACNSG 287 (511)
T ss_pred -HHccHHHHHh
No 24
>6J9N_A CRISPR-associated endonuclease Cas9; AcrIIC3, HYDROLASE-HYDROLASE INHIBITOR complex; HET: MSE; 2.606A {Neisseria meningitidis}
Probab=46.85 E-value=45 Score=22.86 Aligned_cols=30 Identities=23% Similarity=0.139 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred EEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 52 LELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
++++|+ .|...+|. ++++|+..+....|..
T Consensus 78 ~~~~hi-~p~~~~~~-~~~~N~~~~~~~cn~~ 107 (161)
T 6J9N_A 78 VEIDHA-LPFSRTWD-DSFNNKVLVLGSENQN 107 (161)
T ss_dssp EEEEES-SCHHHHCC-CSGGGEEEEEGGGSSS
T ss_pred eEEeee-cccccCCC-CchhceEEcchHHHHH
No 25
>8F43_A CRISPR-associated endonuclease Cas9; nuclease domain, CRISPR Cas9, DNA binding protein, HYDROLASE; 1.37A {Geobacillus stearothermophilus}
Probab=44.13 E-value=49 Score=20.79 Aligned_cols=31 Identities=23% Similarity=0.164 Sum_probs=0.0 Template_Neff=10.500
Q ss_pred EEEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 51 SLELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 51 s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
.++++|+ .|...++. .+..|+..+.+..+..
T Consensus 38 ~~~i~hi-~p~~~~~~-~~~~n~~~~~~~c~~~ 68 (111)
T 8F43_A 38 YVEVDHV-IPYSRSLD-DSYTNAVLVLTRENRE 68 (111)
T ss_dssp SEEEEES-SCHHHHCC-CSGGGEEEEEHHHHHH
T ss_pred ceEEeee-eecccCCC-CchhceeeccHHHHHH
No 26
>6YKF_A HNH endonuclease; PUA superfamily, EVE domain, DNA endonuclease, modification-dependent restriction endonuclease, MDRE, 5-hydroxymethylcytosine, 5-methylcytosine, single stranded DNA, HYDROLASE; HET: 5CM, SO4, GOL; 1.48A {Vibrio campbellii}
Probab=43.70 E-value=45 Score=24.61 Aligned_cols=34 Identities=18% Similarity=-0.044 Sum_probs=0.0 Template_Neff=11.200
Q ss_pred EEEEcCCCChhcCCCCC---ChhhceECChHHHHhhCCC
Q FD01851563_043 52 LELNHRYWPQRDGKHVD---IPYNLEKVTPWEHAAKDPY 87 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~---~~~NL~~vtP~~H~~id~~ 87 (89)
.+.||+ .|...++. . ++.|...+.|..|..+|.+
T Consensus 220 ~~~~hi-~~~~~~~~-~~~~~~~n~~~lc~~~h~~~~~g 256 (309)
T 6YKF_A 220 LIASHI-KPWAVSNN-QERLDGHNGLLLAPHVDHLFDKG 256 (309)
T ss_dssp CEEEES-SCTTTSCH-HHHTCTTSEEEECHHHHHHHHHT
T ss_pred EEEEec-cccccCCC-ccccCCCcceeeCCcHHHHHHcC
No 27
>PF18284.5 ; DNA_meth_N ; DNA methylase N-terminal domain
Probab=42.05 E-value=83 Score=19.57 Aligned_cols=26 Identities=19% Similarity=0.113 Sum_probs=0.0 Template_Neff=6.100
Q ss_pred HHHHHh---cccccCCHHHHHHHHcCC-CC
Q FD01851563_043 6 KAEAKA---APKGMYSPVNMLRMRFGL-AP 31 (89)
Q Consensus 6 K~~A~~---~~~~~fs~~Nl~rM~~G~-AP 31 (89)
|++|.. ...+.+|.+.|.|+.+|+ ++
T Consensus 13 K~vA~~L~~~~~~~Wsre~LnRw~~gk~~~ 42 (57)
T W1J0G2_9GAMM/3 13 KYVAEALRAISHSDWTRETLNRWLNGKMVQ 42 (57)
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHcCCccc
No 28
>7RWK_B SAVED domain-containing protein; DNA nuclease SAVED Sensor Effector, UNKNOWN FUNCTION; 2.39A {Asticcacaulis sp. YBE204}
Probab=41.55 E-value=36 Score=26.77 Aligned_cols=33 Identities=18% Similarity=-0.046 Sum_probs=0.0 Template_Neff=10.100
Q ss_pred EEEcCCCChhcCCCC----------CChhhceECChHHHHhhCC
Q FD01851563_043 53 ELNHRYWPQRDGKHV----------DIPYNLEKVTPWEHAAKDP 86 (89)
Q Consensus 53 ELHH~~~p~~~GG~v----------~~~~NL~~vtP~~H~~id~ 86 (89)
++||+ .+.+.+|.. .+.+||..+.+..|..+|.
T Consensus 43 ~~~hi-~~~~~~g~r~~~~~~~~~~~~~~nli~lC~~ch~~id~ 85 (384)
T 7RWK_B 43 YIAHI-VAAEIDGPRGDPIRSPLLCDDVENLILLCDAHHRLIDV 85 (384)
T ss_dssp GEEES-SCSSTTSTTCCTTHHHHHTTCGGGEEECCHHHHHCCCC
T ss_pred eeeEE-EeCCCCCCCCCCCCCHHHhcCcccEEEcChhhcHhcCc
No 29
>PF13395.10 ; HNH_4 ; HNH endonuclease
Probab=39.35 E-value=67 Score=15.15 Aligned_cols=30 Identities=17% Similarity=0.214 Sum_probs=0.0 Template_Neff=13.300
Q ss_pred EEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 52 LELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
++++|. .+...++. ....|+...-+..+..
T Consensus 19 ~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 48 (55)
T D3UFL8_HELM1/5 19 LQIDHA-FPLSRSLD-DSQSNKVLCLTSSNQE 48 (55)
T ss_pred eEEEEE-eeeecCcC-CCcccEEEeehHHHHH
No 30
>PF05315.15 ; ICEA ; ICEA Protein
Probab=38.80 E-value=43 Score=25.83 Aligned_cols=33 Identities=15% Similarity=0.283 Sum_probs=0.0 Template_Neff=7.200
Q ss_pred cEEEEEEcCCCChhcCC------CCCChhhceECChHHHHh
Q FD01851563_043 49 NVSLELNHRYWPQRDGK------HVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 49 ~~s~ELHH~~~p~~~GG------~v~~~~NL~~vtP~~H~~ 83 (89)
.+.+++.|+ +|...|| . .+.+||..+.......
T Consensus 108 ~~~L~iDHk-iP~~~~g~~~~~~~-~~~~nfQ~LC~~CN~~ 146 (218)
T J9R1X7_RIEAN/2 108 NTKIEIDHK-DGRKDNDRVSNIKT-QRLEDFQPLSKAANDA 146 (218)
T ss_pred CceEEEeec-CCCccCCCcccccc-CCHHHhHHHhHHHHHH
No 31
>7MPZ_A CRISPR-associated endonuclease Cas9; nuclease domain, CRISPR Cas9, DNA binding protein; 2.04A {Geobacillus stearothermophilus}
Probab=36.00 E-value=65 Score=21.77 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=0.0 Template_Neff=10.200
Q ss_pred EEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 52 LELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
.+++|+ .|...||. .+..|+..+.+..|..
T Consensus 71 ~~i~hi-~p~~~~~~-~~~~N~~~~~~~~n~~ 100 (154)
T 7MPZ_A 71 VEVDHV-IPYSRSLD-DSYTNKVLVLTRENRE 100 (154)
T ss_dssp EEEEES-SCHHHHCC-CSGGGEEEEEHHHHHH
T ss_pred eEEEEE-ccccCCCC-CchhcchhhcHHHHHH
No 32
>4OGE_A HNH endonuclease domain protein; CRISPR-Cas, Cas9, HNH, RuvC, RNA-guided DNA endonuclease, cytoplasmic, Hydrolase; HET: SPD; 2.201A {Actinomyces naeslundii}
Probab=35.18 E-value=63 Score=30.53 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred cccccEE---EEEEcCCCChhcC-CCCCChhhceECChHHHHh
Q FD01851563_043 45 ERTRNVS---LELNHRYWPQRDG-KHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 45 ~~g~~~s---~ELHH~~~p~~~G-G~v~~~~NL~~vtP~~H~~ 83 (89)
..|+..+ +++.|+ .|.+.+ +. ++++|+..+....+..
T Consensus 568 Ycg~~i~~~~~~idHI-iP~s~~~~~-~s~~N~vl~~~~cN~~ 608 (1101)
T 4OGE_A 568 YCGTTIGYHTCQLDHI-VPQAGPGSN-NRRGNLVAVCERCNRS 608 (1101)
T ss_dssp TTCCBCCTTTCEEEES-SCBSSSSCC-CSGGGEEEECHHHHHH
T ss_pred CCCCcccCccceeeee-cccCCCCCC-CCchhEEEecHHHHHH
No 33
>PF14044.10 ; NETI ; NETI protein
Probab=34.69 E-value=77 Score=20.36 Aligned_cols=18 Identities=22% Similarity=0.237 Sum_probs=0.0 Template_Neff=3.800
Q ss_pred HHHHHHHH-cCCCCcceee
Q FD01851563_043 19 PVNMLRMR-FGLAPKIRVK 36 (89)
Q Consensus 19 ~~Nl~rM~-~G~AP~~~v~ 36 (89)
.+-|+||+ .|..|..+.+
T Consensus 11 ~~CL~Rm~~eGY~PVrR~E 29 (56)
T U5L4Y3_9BACI/9 11 GQCLDRIAKEGYVPVRRTE 29 (56)
T ss_pred HHHHHHHHHcCCccceeee
No 34
>PF08906.15 ; T6SS_Tdi1_C ; T6SS immunity protein Tdi1, C-terminal
Probab=33.54 E-value=1.1e+02 Score=18.62 Aligned_cols=29 Identities=24% Similarity=0.040 Sum_probs=0.0 Template_Neff=8.700
Q ss_pred EEcCCCChhcCCCCCChhhceECChHHHHhh
Q FD01851563_043 54 LNHRYWPQRDGKHVDIPYNLEKVTPWEHAAK 84 (89)
Q Consensus 54 LHH~~~p~~~GG~v~~~~NL~~vtP~~H~~i 84 (89)
+-.. .+...||. ++++|+....-..|..+
T Consensus 38 y~~~-p~~~lgG~-~~~~n~~~~~~~~~~~~ 66 (71)
T Q88F70_PSEPK/1 38 YAFV-PALMLGGR-PDLKNLEKLKAIEHLIL 66 (71)
T ss_pred EEec-ccHHhCCC-CCHHhceeecHHHHHHH
No 35
>7EL1_A CRISPR-associated endonuclease Cas9; UNKNOWN FUNCTION; 2.22A {Staphylococcus aureus}
Probab=33.27 E-value=50 Score=30.73 Aligned_cols=31 Identities=19% Similarity=0.101 Sum_probs=0.0 Template_Neff=8.500
Q ss_pred EEEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 51 SLELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 51 s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
.+++.|+ .|.+.||. +++.|+..+....+..
T Consensus 552 ~~~idHI-iP~s~~~~-~s~~N~vl~~~~~N~~ 582 (1053)
T 7EL1_A 552 NYEVDHI-IPRSVSFD-NSFNNKVLVKQEEASK 582 (1053)
T ss_dssp GEEEEES-SCTTTCCC-CSTTSEEEEEHHHHHH
T ss_pred cceeeee-ccccccCC-CchhhhhhhcHHHHHH
No 36
>PF18502.5 ; Mrpl_C ; 54S ribosomal protein L8 C-terminal domain
Probab=32.18 E-value=1.1e+02 Score=22.46 Aligned_cols=26 Identities=19% Similarity=0.037 Sum_probs=0.0 Template_Neff=4.300
Q ss_pred HHHHHh-cccccCCH---HHHHHHHcCCCC
Q FD01851563_043 6 KAEAKA-APKGMYSP---VNMLRMRFGLAP 31 (89)
Q Consensus 6 K~~A~~-~~~~~fs~---~Nl~rM~~G~AP 31 (89)
|++..+ +....|++ .||..|..|+.+
T Consensus 22 K~~i~de~~~~~~~~LTLqNL~Km~k~K~~ 51 (117)
T C5E369_LACTC/1 22 KTTIQNESKSVGYSQLTLRNFAKMLKFRKN 51 (117)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHhcCCCh
No 37
>7RWM_C SAVED domain-containing protein; DNA nuclease SAVED Sensor Effector, UNKNOWN FUNCTION; 3.4A {Lactococcus lactis subsp. cremoris IBB477}
Probab=31.32 E-value=66 Score=25.49 Aligned_cols=33 Identities=15% Similarity=-0.021 Sum_probs=0.0 Template_Neff=9.900
Q ss_pred EEEcCCCChhcCCC--------CCChhhceECChHHHHhhCC
Q FD01851563_043 53 ELNHRYWPQRDGKH--------VDIPYNLEKVTPWEHAAKDP 86 (89)
Q Consensus 53 ELHH~~~p~~~GG~--------v~~~~NL~~vtP~~H~~id~ 86 (89)
+++|+ .+...+|. ..+.+||..+.+..|..+|.
T Consensus 53 ~~~Hi-~~~~~~g~r~~~~~~~~~~~~Nl~llc~~ch~~id~ 93 (385)
T 7RWM_C 53 QMAHI-KAFSPKGPRYSDEENNPHQLDNLLLLCAEHHKMIDT 93 (385)
T ss_dssp TSCEE-EEC--------CCCCSSSSTTSEEEECHHHHHHHSS
T ss_pred EEEee-eecCCCCCCCCCCcCCCCchhhhhcccHHhhhccCC
No 38
>8HNT_A CRISPR-associated endonuclease Cas9; Cas9, ANTIMICROBIAL PROTEIN, REC lobe, IMMUNE SYSTEM; 3.06A {Haemophilus parainfluenzae}
Probab=29.73 E-value=52 Score=30.89 Aligned_cols=31 Identities=23% Similarity=0.121 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred EEEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 51 SLELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 51 s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
.+++.|+ .|.+.+|. +++.|++.+....+..
T Consensus 577 ~~eidHI-iP~s~~~~-ds~~N~vl~~~~~N~~ 607 (1055)
T 8HNT_A 577 YVEVDHA-LPFSRTWD-DSFNNKVLVLANENQN 607 (1055)
T ss_dssp TEEEEES-SCHHHHCC-CSGGGEEEEEHHHHHH
T ss_pred CeEEEee-eechhCCC-CccccEEEeehhhccc
No 39
>4H9D_B HNH endonuclease; Structural Genomics, PSI-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium (NESG), nicking endonuclease, HYDROLASE; HET: MSE; 2.599A {Geobacter metallireducens}
Probab=27.94 E-value=99 Score=19.17 Aligned_cols=36 Identities=17% Similarity=0.083 Sum_probs=0.0 Template_Neff=10.900
Q ss_pred EEEEEcCCCChhcCCCCCChhhceECChHHHHhhCCCC
Q FD01851563_043 51 SLELNHRYWPQRDGKHVDIPYNLEKVTPWEHAAKDPYR 88 (89)
Q Consensus 51 s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~id~~R 88 (89)
.+++.|. .+...+|. ....|+..+....|.......
T Consensus 49 ~~~~~h~-~~~~~~~~-~~~~n~~~~~~~c~~~~~~~~ 84 (112)
T 4H9D_B 49 ELTMDHL-VPVVRGGK-STRGNVVPACKECNNRKKYLL 84 (112)
T ss_dssp GEEEEES-SCGGGTCC-CSTTTEEEEEHHHHHHHHHSC
T ss_pred cceecee-cchhhCCC-CcccccHhhCHHHHHHhCCCC
No 40
>5VGB_A CRISPR-associated endonuclease Cas9; Protein, RNA, HYDROLASE-HYDROLASE inhibitor complex; HET: GOL; 1.497A {Neisseria meningitidis}
Probab=27.20 E-value=1.2e+02 Score=20.38 Aligned_cols=31 Identities=23% Similarity=0.114 Sum_probs=0.0 Template_Neff=9.800
Q ss_pred EEEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 51 SLELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 51 s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
+.++.|. .|...++. .++.|+..+.+..+..
T Consensus 70 ~~~~~hi-~p~~~~~~-~~~~n~~~~~~~cn~~ 100 (142)
T 5VGB_A 70 YVEIDHA-LPFSRTWD-DSFNNKVLVLGSENQN 100 (142)
T ss_dssp TEEEEES-SCHHHHCC-CSGGGEEEEEHHHHHH
T ss_pred ceEEEEE-eecccCCC-CchhheeeehHHHHHh
No 41
>6KC8_A CRISPR-associated endonuclease Cas9; CRISPR-Cas9, NmeCas9, Nme1Cas9, hydrolase, ternary complex, HYDROLASE-RNA-DNA complex; 2.9A {Neisseria meningitidis 8013}
Probab=25.42 E-value=73 Score=30.09 Aligned_cols=30 Identities=23% Similarity=0.139 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred EEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 52 LELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
+++.|+ .|.+.+|. ++++|++.+....+..
T Consensus 585 ~eidHI-iP~s~~~~-ds~~N~vl~~~~cN~~ 614 (1083)
T 6KC8_A 585 VEIDHA-LPFSRTWD-DSFNNKVLVLGSENQN 614 (1083)
T ss_dssp EEEEES-SCTTTSCC-CSTTSEEEEETHHHHT
T ss_pred ceeeee-ccchhcCC-CCcccEEEeechhccc
No 42
>5B2R_B CRISPR-associated endonuclease Cas9; CRISPR-Cas9, genome engineering, HYDROLASE-RNA-DNA complex; HET: K, EDO; 2.0A {Streptococcus pyogenes serotype M1}
Probab=25.30 E-value=88 Score=30.60 Aligned_cols=30 Identities=17% Similarity=-0.017 Sum_probs=0.0 Template_Neff=7.600
Q ss_pred EEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 52 LELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
++++|+ .|++.+|. .+++|++.+.+..+..
T Consensus 840 ~eidHI-iP~s~~~d-ds~~N~vL~~~~~N~~ 869 (1372)
T 5B2R_B 840 YDVDAI-VPQSFLKD-DSIDNKVLTRSDKNRG 869 (1372)
T ss_dssp SEEEES-SCTTTCCC-CSGGGEEEESCGGGGC
T ss_pred cccccc-cCcccCCC-CCccceEEeeHHHHHh
No 43
>6M0X_A CRISPR-associated endonuclease Cas9 1; Cas9, CRISPR, DNA BINDING PROTEIN; HET: BA; 2.561A {Streptococcus thermophilus LMD-9}
Probab=24.36 E-value=85 Score=29.66 Aligned_cols=30 Identities=17% Similarity=-0.007 Sum_probs=0.0 Template_Neff=8.300
Q ss_pred EEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 52 LELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
++++|+ .|.+.++. .++.|++.+.+..+..
T Consensus 596 ~eidHI-iP~s~~~~-ds~~N~vl~~~~~N~~ 625 (1122)
T 6M0X_A 596 FEVDAI-LPLSITFD-DSLANKVLVYATANQE 625 (1122)
T ss_dssp EEEEES-SCTTTSCC-CSGGGEEEEEHHHHHH
T ss_pred eEEeee-ccchhcCC-CChHhhHHhhHHHHHH
No 44
>8D2L_A CRISPR-associated endonuclease, Csn1 family; Cas9, AcCas9, Crispr, RNA BINDING PROTEIN, RNA BINDING PROTEIN-DNA-RNA complex; HET: GTP, MG;{Acidothermus cellulolyticus 11B}
Probab=23.31 E-value=90 Score=29.71 Aligned_cols=30 Identities=27% Similarity=0.240 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred EEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 52 LELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 52 ~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
+++.|+ .|.+.+|. +++.|+..+....+..
T Consensus 587 ~eidHI-iP~s~~~~-~s~~N~vl~~~~cN~~ 616 (1138)
T 8D2L_A 587 SELDHI-VPRTDGGS-NRHENLAITCGACNKE 616 (1138)
T ss_dssp CEEEES-SCGGGTCC-CSTTSEEEECSHHHHH
T ss_pred ccccee-eccccCCC-CchhhhheehHHHHHH
No 45
>PF16784.9 ; HNHc_6 ; Putative HNHc nuclease
Probab=21.58 E-value=1.5e+02 Score=22.07 Aligned_cols=32 Identities=9% Similarity=0.112 Sum_probs=0.0 Template_Neff=8.300
Q ss_pred EEEcCCCChhcCCCCCChh----hceECChHHHHhhC
Q FD01851563_043 53 ELNHRYWPQRDGKHVDIPY----NLEKVTPWEHAAKD 85 (89)
Q Consensus 53 ELHH~~~p~~~GG~v~~~~----NL~~vtP~~H~~id 85 (89)
++||. .+...||.....+ ++..+.+.-|..++
T Consensus 134 ~~hH~-~~~g~g~~r~~~~~~~~~~i~LC~~hH~~~H 169 (198)
T Q03RB7_LEVBA/2 134 DIAHV-HAVGIGRDRNHISHIGNYVMALCRRHHQEQH 169 (198)
T ss_pred eeece-eccccCCCCCccccCCCeEEEeCHHHHHHHH
No 46
>PF06147.15 ; DUF968 ; Protein of unknown function (DUF968)
Probab=21.57 E-value=1.6e+02 Score=21.67 Aligned_cols=33 Identities=18% Similarity=0.004 Sum_probs=0.0 Template_Neff=7.800
Q ss_pred EEEcCCCChhcCCC--CCChhhceECChHHHHhhCC
Q FD01851563_043 53 ELNHRYWPQRDGKH--VDIPYNLEKVTPWEHAAKDP 86 (89)
Q Consensus 53 ELHH~~~p~~~GG~--v~~~~NL~~vtP~~H~~id~ 86 (89)
+.||. .+...||. -.+-.|..++.+..|..+|.
T Consensus 110 ~~HHi-~~~g~~G~g~k~~d~~~ipLC~~cH~~~h~ 144 (171)
T R9TRM9_9CAUD/1 110 VAHHL-ILHGEGKLSGKAHDLFTFPLTAEEHRKFHD 144 (171)
T ss_pred eeeEE-EccCCCcCCCCccccceeeCCHHHHHHHhc
No 47
>3M7K_A restriction endonuclease PacI; HNH restriction endonuclease, beta-beta-alpha-metal active site, 8 base-pair rare cutter, HYDROLASE-DNA complex; HET: SO4; 1.92A {Pseudomonas alcaligenes}
Probab=21.20 E-value=1.5e+02 Score=19.40 Aligned_cols=28 Identities=11% Similarity=-0.122 Sum_probs=0.0 Template_Neff=10.600
Q ss_pred EEEEEcCCCChhcCCCCCChhhceECChHHHHh
Q FD01851563_043 51 SLELNHRYWPQRDGKHVDIPYNLEKVTPWEHAA 83 (89)
Q Consensus 51 s~ELHH~~~p~~~GG~v~~~~NL~~vtP~~H~~ 83 (89)
++.++|. .| ..| |+.+|+..+....|..
T Consensus 88 ~~~~d~~-~~--~~~--~~~~N~~~~c~~cN~~ 115 (142)
T 3M7K_A 88 CLGVDRS-DS--FEG--YSPQNARLACFICNRI 115 (142)
T ss_dssp SCEEEES-ST--TSC--BCTTTEEEECHHHHHH
T ss_pred cceeeee-CC--CCC--CCCcceehhhHHHHHH
No 48
>PF06600.15 ; DUF1140 ; Protein of unknown function (DUF1140)
Probab=20.84 E-value=82 Score=22.31 Aligned_cols=9 Identities=33% Similarity=0.933 Sum_probs=0.0 Template_Neff=4.500
Q ss_pred hhHHHHHHH
Q FD01851563_043 2 RDYWKAEAK 10 (89)
Q Consensus 2 ~~~WK~~A~ 10 (89)
++|||++++
T Consensus 45 sryWKa~~~ 53 (99)
T Q9CFQ9_LACLA/5 45 SAYWKSVGN 53 (99)
T ss_pred HHHHhhhcc