Query FD01845424_03165 RHS repeat family protein
Match_columns 114
No_of_seqs 99 out of 103
Neff 2.86046
Searched_HMMs 86581
Date Mon Feb 26 20:46:32 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/3109297.hhr -oa3m ../results/3109297.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1T2H_B Guanyl-specific ribonuc 99.9 1.8E-21 2E-26 123.7 8.8 92 15-112 2-95 (96)
2 1PYL_B ribonuclease; ALPHA-BET 99.8 2.1E-20 2.4E-25 119.0 8.9 92 14-112 3-96 (97)
3 PF00545.24 ; Ribonuclease ; ri 99.8 3.1E-20 3.6E-25 115.1 6.8 78 24-108 1-82 (82)
4 1ZGX_A Guanyl-specific ribonuc 99.8 1.3E-18 1.6E-23 114.0 4.6 61 14-80 1-63 (63)
5 6PQK_A Ribonuclease; disulfide 99.4 1.1E-12 1.3E-17 91.8 6.1 63 39-109 64-127 (128)
6 1A2P_B BARNASE; RIBONUCLEASE, 99.3 3E-11 3.5E-16 79.0 6.3 63 39-109 46-109 (110)
7 1ZGX_B Guanyl-specific ribonuc 99.2 2.2E-11 2.6E-16 70.7 3.9 33 81-113 1-33 (33)
8 2C4B_A BARNASE MCOEETI FUSION; 99.2 7.5E-11 8.7E-16 83.6 5.8 58 44-109 50-108 (143)
9 3DA7_E Barnase circular permut 98.9 2.2E-09 2.5E-14 74.8 4.1 43 69-113 5-47 (111)
10 3Q3F_A Ribonuclease/Ubiquitin 98.6 1.8E-07 2.1E-12 62.6 5.4 57 45-109 53-110 (189)
11 1RDS_A RIBONUCLEASE MS; HYDROL 55.6 98 0.0011 21.1 8.0 66 22-97 15-86 (105)
12 1I0V_A GUANYL-SPECIFIC RIBONUC 52.3 1.1E+02 0.0013 20.6 8.5 69 22-97 14-87 (104)
13 1FUS_A RIBONUCLEASE F1; HYDROL 49.3 1.3E+02 0.0015 20.6 8.0 69 22-97 14-86 (106)
14 3AGN_A Ribonuclease U2; purine 38.4 2.2E+02 0.0025 20.0 7.1 59 22-89 17-88 (114)
15 3WR2_E Guanyl-specific ribonuc 26.4 3.4E+02 0.0039 18.6 7.8 62 25-97 16-82 (101)
16 3DA7_E Barnase circular permut 26.3 63 0.00073 23.1 0.9 12 46-63 98-109 (111)
17 7W05_A Ribonuclease T1; cataly 25.3 3.6E+02 0.0042 18.5 7.8 63 25-97 14-81 (100)
No 1
>1T2H_B Guanyl-specific ribonuclease Sa; mutant, ribonuclease, HYDROLASE; 1.0A {Streptomyces aureofaciens} SCOP: d.1.1.2
Probab=99.87 E-value=1.8e-21 Score=123.71 Aligned_cols=92 Identities=36% Similarity=0.577 Sum_probs=82.3 Template_Neff=10.100
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhcCC-CCCCCCcccccCCcCCccccccC-CCCCCceeeeeecCCCCCCCcceEEEcCC
Q FD01845424_031 15 KWGHKMTPAEMREVQKTIDNIKLNRP-AYPRDGIPFENNFKISPDSQRLN-TGSGPYREWTVKTPGVGNRGARRIVVDTK 92 (114)
Q Consensus 15 ~~~~~~~~~lp~E~~~Tl~~I~~ggP-pY~~DG~~F~Nr~~~~~~e~~LP-~~~GpY~EyTV~TPG~~~RGaRRIV~g~~ 92 (114)
.+..+....||.+++++++.|+.+++ ++..+|.+|.|. +..|| ...|.|+||.|.+|+...||++|||++..
T Consensus 2 ~~~~~~~~~lp~~~~~~~~~i~~~~~~~~~~~g~~~~n~------~~~lp~~~~g~y~e~~v~~~~~~~~g~~R~v~~~~ 75 (96)
T 1T2H_B 2 VSGTVCLSALPPEATDTLNLIASDGPFPYSQDGVVFQNR------ESVLPTQSYGYYHEYTVITPGARTRGTRRIITGEA 75 (96)
T ss_dssp CCCEEEGGGSCHHHHHHHHHHHHTCCCSSTTTTEECCCT------TCCSCCCCTTSCEEEECCCTTCSSSCSCEEEECSS
T ss_pred CCceechhhCCHHHHHHHHHHHhhCCCCCCCCCceecCc------cccCCCCCCCeEEEEEEeCCCCCCCCCeEEEECCC
Confidence 34556677899999999999999999 899999999999 89999 66677999999999999999999999955
Q ss_pred CCcEEeccccccceEEeecC
Q FD01845424_031 93 TGQAYYSHDHYDSFIEIDLG 112 (114)
Q Consensus 93 ~ge~YYT~DHY~SF~~Id~g 112 (114)
+|..|||.|||.+|..|..+
T Consensus 76 ~~~~y~t~dhy~~f~~i~~~ 95 (96)
T 1T2H_B 76 TQEDYWTGDHYATFSLIDQT 95 (96)
T ss_dssp TTCEEEESSTTSCCEEEETT
T ss_pred CCceEEeCCcccccEEeccC
Confidence 55999999999999999764
No 2
>1PYL_B ribonuclease; ALPHA-BETA STRUCTURE, HYDROLASE; HET: SO4; 1.507A {Streptomyces aureofaciens} SCOP: d.1.1.2
Probab=99.84 E-value=2.1e-20 Score=119.02 Aligned_cols=92 Identities=40% Similarity=0.645 Sum_probs=82.8 Template_Neff=10.100
Q ss_pred cccccCCCHHHHHHHHHHHHHHHhcCC-CCCCCCcccccCCcCCccccccC-CCCCCceeeeeecCCCCCCCcceEEEcC
Q FD01845424_031 14 DKWGHKMTPAEMREVQKTIDNIKLNRP-AYPRDGIPFENNFKISPDSQRLN-TGSGPYREWTVKTPGVGNRGARRIVVDT 91 (114)
Q Consensus 14 ~~~~~~~~~~lp~E~~~Tl~~I~~ggP-pY~~DG~~F~Nr~~~~~~e~~LP-~~~GpY~EyTV~TPG~~~RGaRRIV~g~ 91 (114)
..||.++++.||+++++.+..+.+++. +....+..|.|. ...|| ...|.|.||++..++...++.+|+|++.
T Consensus 3 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~g~~~~n~------~~~lp~~~~g~y~e~~v~~~~~~~~g~~r~v~~~ 76 (97)
T 1PYL_B 3 PALADVCRTKLPSQAQDTLALIAKNGPYPYNRDGVVFENR------ESRLPKKGNGYYHEFTVVTPGSNDRGTRRVVTGG 76 (97)
T ss_dssp -CCEEEEGGGSCHHHHHHHHHHHTTCCCSSTTTTEECCCT------TCSSCCCCTTSCEEEECCCTTCSSCCSCEEEECT
T ss_pred CCccccchhhCCHHHHHHHHHHHHhCCCCCCCCCceeccc------cccCCCCCCCeeEEEEEcCCCCCCCCCceEEEcC
Confidence 468899999999999999999999888 777889999998 88899 7778999999998877789999999999
Q ss_pred CCCcEEeccccccceEEeecC
Q FD01845424_031 92 KTGQAYYSHDHYDSFIEIDLG 112 (114)
Q Consensus 92 ~~ge~YYT~DHY~SF~~Id~g 112 (114)
++ .+|||.+||.+|++|.++
T Consensus 77 ~g-~~~yt~~h~~~f~~i~~~ 96 (97)
T 1PYL_B 77 YG-EQYWSPDHYATFQEIDPR 96 (97)
T ss_dssp TS-CEEEESSTTSSCEEEETT
T ss_pred CC-CEEECCCcccccEEccCC
Confidence 87 999999999999999875
No 3
>PF00545.24 ; Ribonuclease ; ribonuclease
Probab=99.83 E-value=3.1e-20 Score=115.13 Aligned_cols=78 Identities=42% Similarity=0.691 Sum_probs=65.3 Template_Neff=10.100
Q ss_pred HHHHHHHHHHHHHhcCC-CCCCCCcccccCCcCCccccccC-CCCCCceeeeeecCCCCCCCcceEEEc-CCCCc-EEec
Q FD01845424_031 24 EMREVQKTIDNIKLNRP-AYPRDGIPFENNFKISPDSQRLN-TGSGPYREWTVKTPGVGNRGARRIVVD-TKTGQ-AYYS 99 (114)
Q Consensus 24 lp~E~~~Tl~~I~~ggP-pY~~DG~~F~Nr~~~~~~e~~LP-~~~GpY~EyTV~TPG~~~RGaRRIV~g-~~~ge-~YYT 99 (114)
||+++...+..+..+++ +....+..|.|. .+.|| ...|.|.||++..++...++.+|+|++ .++ . +|||
T Consensus 1 lp~~~~~~~~~~~~g~~~~~~~~g~~~~n~------~~~lp~~~~g~y~e~~v~~~~~~~~g~~Riv~~~~~g-~~~~~t 73 (82)
T Q5P281_AROAE/3 1 LPPEAIATLQLIERGGPFPYRRDGVVFQNR------ERLLPQRPRGYYREYTVPTPGSRDRGARRLVTGGDPP-AVFYYT 73 (82)
T ss_pred CCHHHHHHHHHHHccCCCCCcCCCceeccc------cccCCCCCCCeEEEEeCCCCCCCCCCCCEEEECCCCC-ceeEEc
Confidence 57778888888888876 655688899998 77889 777899999998776667899999999 666 8 9999
Q ss_pred cccccceEE
Q FD01845424_031 100 HDHYDSFIE 108 (114)
Q Consensus 100 ~DHY~SF~~ 108 (114)
.+||.+|++
T Consensus 74 ~dhy~~f~~ 82 (82)
T Q5P281_AROAE/3 74 DDHYRSFRR 82 (82)
T ss_pred CCccccccC
Confidence 999999974
No 4
>1ZGX_A Guanyl-specific ribonuclease Sa; mutant, HYDROLASE; HET: SO4; 1.13A {Streptomyces aureofaciens}
Probab=99.76 E-value=1.3e-18 Score=113.99 Aligned_cols=61 Identities=34% Similarity=0.506 Sum_probs=0.0 Template_Neff=6.400
Q ss_pred cccccCCCHHHHHHHHHHHHHHHhcCC-CCCCCCcccccCCcCCccccccC-CCCCCceeeeeecCCCC
Q FD01845424_031 14 DKWGHKMTPAEMREVQKTIDNIKLNRP-AYPRDGIPFENNFKISPDSQRLN-TGSGPYREWTVKTPGVG 80 (114)
Q Consensus 14 ~~~~~~~~~~lp~E~~~Tl~~I~~ggP-pY~~DG~~F~Nr~~~~~~e~~LP-~~~GpY~EyTV~TPG~~ 80 (114)
+....+....||.|+++||++|++|+| +|.+||.+|+|+ |++|| +++|-||||||.|||..
T Consensus 1 ~~~~~~~~~~lp~~a~~tl~~i~~gg~~p~~~dG~~F~N~------eg~LP~~~~gyYrEy~V~tpG~~ 63 (63)
T 1ZGX_A 1 DVSGTVCLSALPPEATDTLNLIASDGPFPYSQDGVVFQNR------ESVLPTQSYGYYHEYTVITPGAR 63 (63)
T ss_dssp CCCCEEEGGGSCHHHHHHHHHHHHTCCCSSTTTTCBCCCT------TCCSCCCCTTSCEEEECCCTTCC
T ss_pred CCCccccHhhCCHHHHHHHHHHHhhCCCCCCCCCceecCC------CccCCCCCCCceEEccCCCCCCC
No 5
>6PQK_A Ribonuclease; disulfide, Toxin-Antitoxin, complex, nuclease, RNA BINDING PROTEIN; HET: PO4, EDO; 1.2A {Bacillus amyloliquefaciens} SCOP: d.1.1.2
Probab=99.40 E-value=1.1e-12 Score=91.79 Aligned_cols=63 Identities=27% Similarity=0.442 Sum_probs=0.0 Template_Neff=8.500
Q ss_pred CCCCCCCCcccccCCcCCccccccC-CCCCCceeeeeecCCCCCCCcceEEEcCCCCcEEeccccccceEEe
Q FD01845424_031 39 RPAYPRDGIPFENNFKISPDSQRLN-TGSGPYREWTVKTPGVGNRGARRIVVDTKTGQAYYSHDHYDSFIEI 109 (114)
Q Consensus 39 gPpY~~DG~~F~Nr~~~~~~e~~LP-~~~GpY~EyTV~TPG~~~RGaRRIV~g~~~ge~YYT~DHY~SF~~I 109 (114)
.|....+|.+|.|+ ++.|| ...+.|+||.|.++ ...||++|||++ .+|..|||.|||.+|++|
T Consensus 64 ~~~~~~~g~~f~n~------~~~LP~~~~~~y~e~dv~~~-~~~rg~~Riv~~-~~G~~y~T~dhy~tf~~i 127 (128)
T 6PQK_A 64 APGKSIGGDIFSNR------EGKLPGKSGRTWREADINYT-CGFRNSDRILYS-SDWLIYKTTDHYQTFTKI 127 (128)
T ss_dssp STTCEEEEEEECCT------TCCSCCCTTCCEEEEECSCC-SSSCCSCEEEEE-TTCCEEEESSTTSCCEEC
T ss_pred CCCceecCceecCC------CCCCCCCCCceEEEeeeecC-CCCcCCeEEEEC-CCCcEEEeCCcccccEEc
No 6
>1A2P_B BARNASE; RIBONUCLEASE, MICROBIAL RIBONUCLEASE, ALPHA/BETA PROTEIN; 1.5A {Bacillus amyloliquefaciens} SCOP: d.1.1.2
Probab=99.26 E-value=3e-11 Score=78.99 Aligned_cols=63 Identities=27% Similarity=0.430 Sum_probs=0.0 Template_Neff=10.000
Q ss_pred CCCCCCCCcccccCCcCCccccccC-CCCCCceeeeeecCCCCCCCcceEEEcCCCCcEEeccccccceEEe
Q FD01845424_031 39 RPAYPRDGIPFENNFKISPDSQRLN-TGSGPYREWTVKTPGVGNRGARRIVVDTKTGQAYYSHDHYDSFIEI 109 (114)
Q Consensus 39 gPpY~~DG~~F~Nr~~~~~~e~~LP-~~~GpY~EyTV~TPG~~~RGaRRIV~g~~~ge~YYT~DHY~SF~~I 109 (114)
.|.....|.+|.|. +..|| ...+.|+||.|.+ ....||++|||.+ .+|..|||.|||.+|.+|
T Consensus 46 ~~~~~~~g~~~~n~------~~~lp~~~~~~~~e~dv~~-~~~~rg~~riv~~-~~G~~~~t~dhy~~f~~~ 109 (110)
T 1A2P_B 46 APGKSIGGDIFSNR------EGKLPGKSGRTWREADINY-TSGFRNSDRILYS-SDWLIYKTTDHYQTFTKI 109 (110)
T ss_dssp STTCEEEEEEECCT------TCCSCCCTTCCEEEEECSC-CSSSCCSCEEEEE-TTCCEEEESSTTSCCEEC
T ss_pred cCCceeccccccCC------CCCCCCCCCCcEEEeeeeC-CCCCcCCceEEEC-CCCcEEEeCCccCccEEc
No 7
>1ZGX_B Guanyl-specific ribonuclease Sa; mutant, HYDROLASE; HET: SO4; 1.13A {Streptomyces aureofaciens}
Probab=99.23 E-value=2.2e-11 Score=70.68 Aligned_cols=33 Identities=42% Similarity=0.734 Sum_probs=0.0 Template_Neff=6.900
Q ss_pred CCCcceEEEcCCCCcEEeccccccceEEeecCC
Q FD01845424_031 81 NRGARRIVVDTKTGQAYYSHDHYDSFIEIDLGG 113 (114)
Q Consensus 81 ~RGaRRIV~g~~~ge~YYT~DHY~SF~~Id~gg 113 (114)
+||++|||+|..+|..|||.|||.+|..|..++
T Consensus 1 ~Rg~~Riv~~~~~~~~yyt~dHy~tf~~i~~~~ 33 (33)
T 1ZGX_B 1 TRGTRRIITGEATQEDYYTGDHYATFSLIDKTC 33 (33)
T ss_dssp CCCSCEEEECSSTTCEEEESSTTSCCEEEETTC
T ss_pred CCCCceEEECCCCCcEEecCCCccceEEeecCC
No 8
>2C4B_A BARNASE MCOEETI FUSION; SQUASH INHIBITOR, HYBRID MICROPROTEIN, FUSION PROTEIN, RIBONUCLEASE, ENDONUCLEASE, HYDROLASE, NUCLEASE, PROTEASE INHIBITOR, SERINE PROTEASE INHIBITOR; HET: SO4, MES, EDO, UNX, FMT, 2PE; 1.3A {BACILLUS AMYLOLIQUEFACIENS} SCOP: d.1.1.2, g.3.2.1
Probab=99.19 E-value=7.5e-11 Score=83.57 Aligned_cols=58 Identities=26% Similarity=0.410 Sum_probs=0.0 Template_Neff=8.700
Q ss_pred CCCcccccCCcCCccccccC-CCCCCceeeeeecCCCCCCCcceEEEcCCCCcEEeccccccceEEe
Q FD01845424_031 44 RDGIPFENNFKISPDSQRLN-TGSGPYREWTVKTPGVGNRGARRIVVDTKTGQAYYSHDHYDSFIEI 109 (114)
Q Consensus 44 ~DG~~F~Nr~~~~~~e~~LP-~~~GpY~EyTV~TPG~~~RGaRRIV~g~~~ge~YYT~DHY~SF~~I 109 (114)
.+|.+|.|+ +..|| ...+.|+||.|..++ ..||++|||++ ..|..|||.|||++|.+|
T Consensus 50 ~~g~~~~n~------~~~LP~~~~~~y~e~dv~~~~-~~rg~~Riv~~-~~g~~~~t~dhy~~f~~i 108 (143)
T 2C4B_A 50 IGGDIFSNR------EGKLPGKSGRTWREADINYTS-GFRNSDRILYS-SDWLIYKTTDAYQTFTKI 108 (143)
T ss_dssp EEEEEECCT------TCCSCCCTTCCEEEEECSCCS-SSCCSCEEEEE-TTCCEEEESSTTSCCEEE
T ss_pred ecCceecCC------CCCCCCCCCceEEEeeeecCC-CCcCCeeEEEc-CCcceEEeCCccccceEe
No 9
>3DA7_E Barnase circular permutant; CIRCULAR PERMUTANT, PROTEIN-PROTEIN COMPLEX, ENDONUCLEASE, Cytoplasm, PROTEIN BINDING; 2.25A {Bacillus amyloliquefaciens}
Probab=98.93 E-value=2.2e-09 Score=74.81 Aligned_cols=43 Identities=28% Similarity=0.477 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred ceeeeeecCCCCCCCcceEEEcCCCCcEEeccccccceEEeecCC
Q FD01845424_031 69 YREWTVKTPGVGNRGARRIVVDTKTGQAYYSHDHYDSFIEIDLGG 113 (114)
Q Consensus 69 Y~EyTV~TPG~~~RGaRRIV~g~~~ge~YYT~DHY~SF~~Id~gg 113 (114)
|+||.|.+++ ..||++|||.+ .+|..|||.|||++|..|...+
T Consensus 5 y~e~dv~~~~-~~rg~~Riv~~-~~g~~yyt~dhy~sf~~i~~~~ 47 (111)
T 3DA7_E 5 WREADINYTS-GFRNSDRILYS-SDWLIYKTTDHYQTFTKIRCAQ 47 (111)
T ss_dssp EEEEECSCCS-SSCCSCEEEEE-TTCCEEEESSTTSSCEECC---
T ss_pred EEEEEeecCC-CCcCceEEEeC-CCceEEecCccccccccccccc
No 10
>3Q3F_A Ribonuclease/Ubiquitin chimeric protein; domain swap, oligomerization, ubiquitin insertion, HYDROLASE, PROTEIN BINDING; HET: SO4; 2.169A {Bacillus amyloliquefaciens}
Probab=98.61 E-value=1.8e-07 Score=62.65 Aligned_cols=57 Identities=26% Similarity=0.395 Sum_probs=0.0 Template_Neff=11.700
Q ss_pred CCcccccCCcCCccccccC-CCCCCceeeeeecCCCCCCCcceEEEcCCCCcEEeccccccceEEe
Q FD01845424_031 45 DGIPFENNFKISPDSQRLN-TGSGPYREWTVKTPGVGNRGARRIVVDTKTGQAYYSHDHYDSFIEI 109 (114)
Q Consensus 45 DG~~F~Nr~~~~~~e~~LP-~~~GpY~EyTV~TPG~~~RGaRRIV~g~~~ge~YYT~DHY~SF~~I 109 (114)
.|.+|.|. ++.|| ...+.|+|+-|...+ ..|+++|||.. ..+..|||.|||.+|+.|
T Consensus 53 ~g~~~~n~------~~~lp~~~~~~~~e~d~~~~~-~~~~~~r~~~~-~~~~~~~t~~~~~~~i~i 110 (189)
T 3Q3F_A 53 GGDIFSNR------EGKLPGKSGRTWREADINYTS-GFRNSDRILYS-SDWLIYKTTDHYGGQIFV 110 (189)
T ss_dssp EEEEECCT------TCCSCCCTTCCEEEEECSCCS-SSCCSCEEEEE-TTCCEEEESCCCCEEEEE
T ss_pred cCEEEeCC------CCCCCCCCCCeeEEeecCCCC-CCcCCceEEec-CCeEEEEeCCCcCceEEE
No 11
>1RDS_A RIBONUCLEASE MS; HYDROLASE(ENDORIBONUCLEASE); HET: GPC; 1.8A {Aspergillus phoenicis} SCOP: d.1.1.4
Probab=55.62 E-value=98 Score=21.05 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=0.0 Template_Neff=9.200
Q ss_pred HHHHHHHHHHHHHHHhcCC--CCCCCCcccccCCcCCccccccCCCCCCceeeeeecCC----CCCCCcceEEEcCCCCc
Q FD01845424_031 22 PAEMREVQKTIDNIKLNRP--AYPRDGIPFENNFKISPDSQRLNTGSGPYREWTVKTPG----VGNRGARRIVVDTKTGQ 95 (114)
Q Consensus 22 ~~lp~E~~~Tl~~I~~ggP--pY~~DG~~F~Nr~~~~~~e~~LP~~~GpY~EyTV~TPG----~~~RGaRRIV~g~~~ge 95 (114)
.++-..+....++++.+.+ .|+. .|.|. |...=...++|.||-+.-.+ -+..|..|||+. ...+
T Consensus 15 ~~i~~a~~~a~~~~~~~~~~~~yP~---~f~~~------~~~~f~~~~~~~e~Pl~~~~~~~~~g~pg~~RvV~~-~~~~ 84 (105)
T 1RDS_A 15 SDVSAAKAKGYSLYESGDTIDDYPH---EYHDY------EGFDFPVSGTYYEYPIMSDYDVYTGGSPGADRVIFN-GDDE 84 (105)
T ss_dssp HHHHHHHHHHHHHHHHTCCBTTBSE---EECCT------TCCCCSSCSCEEEEEBCTTCCBCCSSCCCSEEEEEE-TTCC
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc---ccCCC------CCCCCCCCCeeeEeceeCCCccccCCCCCCcEEEEc-CCCe
Q ss_pred EE
Q FD01845424_031 96 AY 97 (114)
Q Consensus 96 ~Y 97 (114)
..
T Consensus 85 ~~ 86 (105)
T 1RDS_A 85 LA 86 (105)
T ss_dssp EE
T ss_pred EE
No 12
>1I0V_A GUANYL-SPECIFIC RIBONUCLEASE T1; ribonuclease, RNase, stability, metal binding, 2'GMP, HYDROLASE; HET: 2GP; 1.234A {Aspergillus oryzae} SCOP: d.1.1.4
Probab=52.27 E-value=1.1e+02 Score=20.63 Aligned_cols=69 Identities=19% Similarity=0.188 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCCCCCcccccCCcCCccccccCCCCCCceeeeeecCC-CC---CCCcceEEEcCCCCcE
Q FD01845424_031 22 PAEMREVQKTIDNIKLNRP-AYPRDGIPFENNFKISPDSQRLNTGSGPYREWTVKTPG-VG---NRGARRIVVDTKTGQA 96 (114)
Q Consensus 22 ~~lp~E~~~Tl~~I~~ggP-pY~~DG~~F~Nr~~~~~~e~~LP~~~GpY~EyTV~TPG-~~---~RGaRRIV~g~~~ge~ 96 (114)
.++-..+....+++..+.+ ....-=..|.|. +...-...|+|.||-+...+ .- +.|..|||+. ..+..
T Consensus 14 ~~i~~a~~~a~~~~~~~~~~~~~~yP~~f~~~------~~~~f~~~~~~~e~Pi~~~~~~~~~g~pg~~RVV~~-~~~~~ 86 (104)
T 1I0V_A 14 SDVSTAQAAGYKLHEDGETVGSNSYPHKYNNY------EGFDFSVSSPYYEWPILSSGDVYSGGSPGADRVVFN-ENNQL 86 (104)
T ss_dssp HHHHHHHHHHHHHHHHTCCBTTTTBSEEECCT------TCCCCSSCSCEEEEECCTTSSCCCSSCCCSEEEEEE-TTCCE
T ss_pred HHHHHHHHHHHHHHHcCCCCCccCCCccccCC------CCCCCCCCCCceEEeeecCCccccCCCCCCcEEEEC-CCCcE
Q ss_pred E
Q FD01845424_031 97 Y 97 (114)
Q Consensus 97 Y 97 (114)
.
T Consensus 87 ~ 87 (104)
T 1I0V_A 87 A 87 (104)
T ss_dssp E
T ss_pred E
No 13
>1FUS_A RIBONUCLEASE F1; HYDROLASE(ENDORIBONUCLEASE); 1.3A {Gibberella fujikuroi} SCOP: d.1.1.4
Probab=49.26 E-value=1.3e+02 Score=20.59 Aligned_cols=69 Identities=17% Similarity=0.244 Sum_probs=0.0 Template_Neff=9.100
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCCCCCcccccCCcCCccccccCCCCCCceeeeeecCC---CCCCCcceEEEcCCCCcEE
Q FD01845424_031 22 PAEMREVQKTIDNIKLNRP-AYPRDGIPFENNFKISPDSQRLNTGSGPYREWTVKTPG---VGNRGARRIVVDTKTGQAY 97 (114)
Q Consensus 22 ~~lp~E~~~Tl~~I~~ggP-pY~~DG~~F~Nr~~~~~~e~~LP~~~GpY~EyTV~TPG---~~~RGaRRIV~g~~~ge~Y 97 (114)
.++-.-+.+..+++..+.+ -...==..|.|. +...-...|+|.||-+-..+ .++.|..|||+. ..++..
T Consensus 14 ~~i~~a~~~a~~~~~~~~~~~~~~yP~~f~~~------~~~~f~~~~~l~e~Pi~~~~~~~~g~~g~~RVV~~-~~~~~~ 86 (106)
T 1FUS_A 14 SQVRAAANAACQYYQNDDTAGSSTYPHTYNNY------EGFDFPVDGPYQEFPIKSGGVYTGGSPGADRVVIN-TNCEYA 86 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCCSTTSCCSEEECCT------TCCCCSSCSCEEEEECCTTSSCCSSCCCSEEEEEE-TTCCEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCcccCCC------CCCCCCCCCCCeeccccCCCccCCCCCCCcEEEEC-CCCcEE
No 14
>3AGN_A Ribonuclease U2; purine-specific endo-ribonuclease, HYDROLASE; HET: 3AM; 0.96A {Ustilago sphaerogena} SCOP: d.1.1.4
Probab=38.35 E-value=2.2e+02 Score=20.01 Aligned_cols=59 Identities=19% Similarity=0.338 Sum_probs=0.0 Template_Neff=8.800
Q ss_pred HHHHHHHHHHHHHHHhcCC--CCCCCCcccccCCcCCccccccCCC---CCCceeeeeec-----CCC---CCCCcceEE
Q FD01845424_031 22 PAEMREVQKTIDNIKLNRP--AYPRDGIPFENNFKISPDSQRLNTG---SGPYREWTVKT-----PGV---GNRGARRIV 88 (114)
Q Consensus 22 ~~lp~E~~~Tl~~I~~ggP--pY~~DG~~F~Nr~~~~~~e~~LP~~---~GpY~EyTV~T-----PG~---~~RGaRRIV 88 (114)
.++...+.+...++..|.. .|+. .|.|. |...=.. .+++.||-+.- .+. ...|..|||
T Consensus 17 ~~i~~a~~~a~~~~~~~~~~~~YP~---~f~n~------e~~~~~~~c~~~~l~efPl~~~~~~~~~~~~~~~pg~~RVV 87 (114)
T 3AGN_A 17 DDINTAIQGALDDVANGDRPDNYPH---QYYDE------ASEDITLCCGSGPWSEFPLVYNGPYYSSRDNYVSPGPDRVI 87 (114)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCE---EECCC------GGGCCCCSSCSCCEEEEECCTTSCCCCBTTBCCCCCSEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCcCCCc---ccCCC------CCCcCccccCCCCeeeeeEEeCCCcCCCCCCCCCCCCeEEE
Q ss_pred E
Q FD01845424_031 89 V 89 (114)
Q Consensus 89 ~ 89 (114)
+
T Consensus 88 ~ 88 (114)
T 3AGN_A 88 Y 88 (114)
T ss_dssp E
T ss_pred E
No 15
>3WR2_E Guanyl-specific ribonuclease Po1; RNase, Hydrolase; HET: 3GP; 1.75A {Pleurotus ostreatus} SCOP: d.1.1.0
Probab=26.44 E-value=3.4e+02 Score=18.57 Aligned_cols=62 Identities=21% Similarity=0.373 Sum_probs=0.0 Template_Neff=8.900
Q ss_pred HHHHHHHHHHHHhcCC-CCCCCCcccccCCcCCccccc-cCCCCCCceeeeeecC---CCCCCCcceEEEcCCCCcEE
Q FD01845424_031 25 MREVQKTIDNIKLNRP-AYPRDGIPFENNFKISPDSQR-LNTGSGPYREWTVKTP---GVGNRGARRIVVDTKTGQAY 97 (114)
Q Consensus 25 p~E~~~Tl~~I~~ggP-pY~~DG~~F~Nr~~~~~~e~~-LP~~~GpY~EyTV~TP---G~~~RGaRRIV~g~~~ge~Y 97 (114)
..+++++++...+-.. .|+. .|.|. |.. ++ ..|+|.||-+... ..+..|.-|||+. ..+...
T Consensus 16 ~~~i~~a~~~a~~~~~~~yP~---~f~~~------~~~~f~-~~~~l~e~Pi~~~g~~~gg~pg~~Rvv~~-~~~~~~ 82 (101)
T 3WR2_E 16 GTDVTNAIRSARAGGSGNYPH---VYNNF------EGFSFS-CTPTFFEFPVFRGSVYSGGSPGADRVIYD-QSGRFC 82 (101)
T ss_dssp HHHHHHHHHHHHTTCBTTBCE---EECCT------TCCCCS-SCSSEEEEEBCSSSBCCSSCCCSEEEEEE-TTSBEE
T ss_pred HHHHHHHHHHHHhcCCCCCCC---ccCCC------CCCCCC-CCCCeEEEeeecCCccCCCCCCCcEEEEc-CCCcEE
No 16
>3DA7_E Barnase circular permutant; CIRCULAR PERMUTANT, PROTEIN-PROTEIN COMPLEX, ENDONUCLEASE, Cytoplasm, PROTEIN BINDING; 2.25A {Bacillus amyloliquefaciens}
Probab=26.32 E-value=63 Score=23.11 Aligned_cols=12 Identities=33% Similarity=0.459 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred CcccccCCcCCccccccC
Q FD01845424_031 46 GIPFENNFKISPDSQRLN 63 (114)
Q Consensus 46 G~~F~Nr~~~~~~e~~LP 63 (114)
|-+|.|+ |+.||
T Consensus 98 Gd~f~N~------~~~LP 109 (111)
T 3DA7_E 98 GDIFSNR------EGKLP 109 (111)
T ss_dssp EEEECCT------TCCSS
T ss_pred CcccCCC------CCCCC
No 17
>7W05_A Ribonuclease T1; catalytic activity enzyme anti tumor activity nucleic acid binding RNA binding, DNA BINDING PROTEIN; HET: GMP; 1.29A {Hericium erinaceus}
Probab=25.28 E-value=3.6e+02 Score=18.48 Aligned_cols=63 Identities=21% Similarity=0.420 Sum_probs=0.0 Template_Neff=8.800
Q ss_pred HHHHHHHHHHHHhcCC-CCCCCCcccccCCcCCccccc-cCCCCCCceeeeeecCCCCC---CCcceEEEcCCCCcEE
Q FD01845424_031 25 MREVQKTIDNIKLNRP-AYPRDGIPFENNFKISPDSQR-LNTGSGPYREWTVKTPGVGN---RGARRIVVDTKTGQAY 97 (114)
Q Consensus 25 p~E~~~Tl~~I~~ggP-pY~~DG~~F~Nr~~~~~~e~~-LP~~~GpY~EyTV~TPG~~~---RGaRRIV~g~~~ge~Y 97 (114)
..++++++..-..... .|+. .|.|. +.+ ++.-.|+|.||-+...+.-. .|.-|||+. ...+..
T Consensus 14 ~~~i~~a~~~a~~~~~~~yP~---~f~n~------~~~~f~~~~~~~~efPi~~~~~y~gg~pg~~RvV~~-~~~~~~ 81 (100)
T 7W05_A 14 SSNIANAINQAQGRGGGNYPH---QYHNY------EGFSFPSCRGQFFEYPLQRSGVYTGGSPGADRVIYD-QNGNFC 81 (100)
T ss_dssp HHHHHHHHHHHHTTCBTTBCE---EECCT------TCCCCTTCCSCEEEEECCSSSCCCSSCCCSEEEEEE-TTSCEE
T ss_pred HHHHHHHHHHHHhcCCCCCCc---ccCCC------CCCCCCCCCCceeEEEeeeCCccCCCCCCCcEEEEC-CCCcEE