Query FD01845440_04459 hypothetical protein
Match_columns 86
No_of_seqs 79 out of 81
Neff 4.96862
Searched_HMMs 86581
Date Tue Feb 27 20:18:51 2024
Command hhsearch -cpu 8 -i ../results/full.a3m -d /cluster/toolkit/production/databases/hh-suite/mmcif70/pdb70 -d /cluster/toolkit/production/databases/hh-suite/pfama/pfama -o ../results/6838299.hhr -oa3m ../results/6838299.a3m -p 20 -Z 250 -loc -z 1 -b 1 -B 250 -ssm 2 -sc 1 -seq 1 -dbstrlen 10000 -norealign -maxres 32000 -contxt /cluster/toolkit/production/bioprogs/tools/hh-suite-build-new/data/context_data.crf
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF08138.15 ; Sex_peptide ; Sex 62.4 4 4.6E-05 26.0 -0.3 13 34-46 35-47 (55)
2 PF13124.10 ; DUF3963 ; Protein 43.9 28 0.00033 20.9 1.2 9 36-44 14-22 (40)
3 5LSJ_C Protein MIS12 homolog; 42.6 1.5E+02 0.0017 21.8 5.0 47 36-83 80-130 (205)
4 7D60_G Calcium homeostasis mod 39.9 1.5E+02 0.0017 23.3 4.9 58 4-83 175-232 (288)
5 PF18392.5 ; CSN7a_helixI ; COP 36.9 32 0.00037 18.9 0.7 8 38-45 9-16 (50)
6 PF03185.19 ; CaKB ; Calcium-ac 35.6 1.3E+02 0.0015 21.5 3.7 36 9-44 156-191 (191)
7 2LAQ_A Accessory gland-specifi 34.7 21 0.00024 21.0 -0.3 13 34-46 16-28 (36)
8 8ESZ_BM NADH dehydrogenase [ub 34.0 62 0.00071 24.1 2.0 31 17-47 81-111 (150)
9 7DGZ_h NADH dehydrogenase [ubi 31.4 1.2E+02 0.0013 22.3 2.9 35 13-47 60-94 (125)
10 7VYS_e NADH dehydrogenase [ubi 31.4 1.3E+02 0.0015 21.3 3.0 35 13-47 39-73 (104)
11 8B9Z_g NADH dehydrogenase [ubi 30.9 85 0.00098 22.3 2.1 35 13-47 35-69 (108)
12 PF20404.2 ; DUF6694 ; Family o 30.9 93 0.0011 20.3 2.2 24 63-86 34-57 (103)
13 PF14798.10 ; Ca_hom_mod ; Calc 28.6 2.5E+02 0.0028 21.4 4.4 58 4-83 171-228 (247)
14 PF05859.16 ; Mis12 ; Mis12 pro 27.4 3.4E+02 0.004 20.8 5.0 47 36-83 76-132 (239)
15 PF14199.10 ; DUF4317 ; Domain 27.1 1.2E+02 0.0014 25.7 2.8 38 34-86 211-248 (369)
16 7R47_g NADH dehydrogenase [ubi 24.9 1.2E+02 0.0014 23.1 2.2 31 17-47 93-123 (154)
17 PF17867.5 ; AAA_lid_7 ; Midasi 24.5 72 0.00083 19.2 0.8 12 33-44 38-49 (98)
18 PF10745.13 ; DUF2530 ; Protein 24.3 2.1E+02 0.0024 19.0 3.0 37 12-48 16-52 (81)
19 PF06936.15 ; Selenoprotein_S ; 24.2 2E+02 0.0024 22.0 3.3 28 16-44 39-67 (195)
20 PF04210.17 ; MtrG ; Tetrahydro 23.8 2.2E+02 0.0025 18.0 2.9 24 3-30 41-64 (64)
21 PF05517.16 ; p25-alpha ; p25-a 23.4 1.2E+02 0.0014 21.4 1.8 52 33-84 20-72 (156)
22 6UIW_I Calcium homeostasis mod 23.2 4.4E+02 0.0051 21.5 5.1 58 4-83 180-237 (331)
23 4L1P_B RNA polymerase-associat 23.0 1.4E+02 0.0016 20.7 2.0 37 33-81 101-137 (138)
24 PF09472.14 ; MtrF ; Tetrahydro 22.7 2.2E+02 0.0026 18.0 2.8 24 3-30 39-63 (63)
25 PF02416.20 ; TatA_B_E ; mttA/H 22.6 2.7E+02 0.0031 16.1 3.3 28 14-44 1-28 (53)
26 PF10281.13 ; Ish1 ; Putative n 22.6 92 0.0011 16.6 0.9 13 33-45 4-16 (38)
27 6UMM_D ESX-3 secretion system 22.5 3.4E+02 0.004 17.9 3.7 24 12-35 58-81 (81)
28 8GMP_F Calcium homeostasis mod 22.4 1.6E+02 0.0019 23.9 2.6 58 4-83 180-237 (314)
29 3VEA_B Macrodomain Ter protein 21.9 99 0.0011 22.8 1.2 13 34-46 50-62 (151)
30 6SEI_B Structure-specific endo 21.7 89 0.001 22.1 0.9 13 33-45 74-86 (104)
31 6LMT_B Calcium homeostasis mod 21.3 3.6E+02 0.0041 21.6 4.2 58 4-83 177-234 (301)
32 PF02234.23 ; CDI ; Cyclin-depe 21.2 1.2E+02 0.0014 16.9 1.2 29 45-79 1-29 (50)
33 PF14141.10 ; YqzM ; YqzM-like 21.2 3.3E+02 0.0038 16.6 3.8 25 6-34 18-42 (42)
34 5OEN_B Signal transducer and a 20.1 1.1E+02 0.0013 21.5 1.2 9 36-44 116-124 (175)
No 1
>PF08138.15 ; Sex_peptide ; Sex peptide (SP) family
Probab=62.41 E-value=4 Score=26.03 Aligned_cols=13 Identities=23% Similarity=0.700 Sum_probs=0.0 Template_Neff=2.700
Q ss_pred CChHHHHHHHhCc
Q FD01845440_044 34 TDNKLQSWCEQCV 46 (86)
Q Consensus 34 tdndLQ~WC~~cv 46 (86)
+||+.|+||+-+.
T Consensus 35 ~p~~rdKWCRLNl 47 (55)
T A70A_DROME/1-5 35 SPNPRDKWCRLNL 47 (55)
T ss_pred CCCcccccccccC
No 2
>PF13124.10 ; DUF3963 ; Protein of unknown function (DUF3963)
Probab=43.88 E-value=28 Score=20.95 Aligned_cols=9 Identities=22% Similarity=0.796 Sum_probs=0.0 Template_Neff=1.900
Q ss_pred hHHHHHHHh
Q FD01845440_044 36 NKLQSWCEQ 44 (86)
Q Consensus 36 ndLQ~WC~~ 44 (86)
||.|+|.+.
T Consensus 14 dDIQKWiRN 22 (40)
T A0A6L8PPG6_BAC 14 HDIQKWIRN 22 (40)
T ss_pred HHHHHHHHH
No 3
>5LSJ_C Protein MIS12 homolog; ALPHA-HELICAL, cell cycle; 3.25A {Homo sapiens}
Probab=42.62 E-value=1.5e+02 Score=21.80 Aligned_cols=47 Identities=15% Similarity=0.243 Sum_probs=0.0 Template_Neff=8.900
Q ss_pred hHHHHHHHhCccCCCCC----cccCCCCCCCHHHhcccHHHHHHHHHHHHHH
Q FD01845440_044 36 NKLQSWCEQCVFGVNAD----EDVKNPRSLPEEQRKTVEEEQQDKLEKALHE 83 (86)
Q Consensus 36 ndLQ~WC~~cvFG~~~~----~~~~~~~~y~~~~~~~~~~eQ~~~f~kAl~~ 83 (86)
|.++.||-+++|..+++ .+......|++++- +..+++.+++.+-+..
T Consensus 80 d~fE~y~~~nif~IP~~v~Lp~d~~~~~~~t~e~e-~~Ld~ei~~Lr~~i~~ 130 (205)
T 5LSJ_C 80 SKMEQLFLQLILRIPSNILLPEDKCKETPYSEEDF-QHLQKEIEQLQEKYKT 130 (205)
T ss_dssp HHHHHHHHHHSSCCCSSCCCGGGSTTTSCCCHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCcccCCccccccCCCCCHHHH-HHHHHHHHHHHHHHHH
No 4
>7D60_G Calcium homeostasis modulator protein 5; large pore channel, TRANSPORT PROTEIN; HET: PA8; 2.61A {Homo sapiens}
Probab=39.85 E-value=1.5e+02 Score=23.26 Aligned_cols=58 Identities=16% Similarity=0.294 Sum_probs=0.0 Template_Neff=8.400
Q ss_pred HhHhhhhhHHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHhCccCCCCCcccCCCCCCCHHHhcccHHHHHHHHHHHHHH
Q FD01845440_044 4 ARIVVGWGGFLASWPVMIAVNLAPVLVMLLTDNKLQSWCEQCVFGVNADEDVKNPRSLPEEQRKTVEEEQQDKLEKALHE 83 (86)
Q Consensus 4 ~r~l~~~~~~lagw~v~i~i~~iq~li~~ftdndLQ~WC~~cvFG~~~~~~~~~~~~y~~~~~~~~~~eQ~~~f~kAl~~ 83 (86)
.+... -+.||.+.++++++-.++ .+|.+|-...... ...| ...-.+++++.|++.+++
T Consensus 175 ~~~~S----q~iG~~ll~~~~~~~~~~---------~~~~~C~~~~~~~-----~~~y----~~~y~~~e~~~~~e~~~e 232 (288)
T 7D60_G 175 LQAQS----QILGWCLICSASFFSLLT---------TCYARCRSKVSYL-----QLSF----WKTYAQKEKEQLENTFLD 232 (288)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHHH---------HHHHHHTCSSCHH-----HHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHhh----hhHHHHHHHHHHHHHHHH---------HHHHHcCCCChhH-----HHHH----HHHHHHHHHHHHHHHHHH
No 5
>PF18392.5 ; CSN7a_helixI ; COP9 signalosome complex subunit 7a helix I domain
Probab=36.89 E-value=32 Score=18.89 Aligned_cols=8 Identities=63% Similarity=1.954 Sum_probs=0.0 Template_Neff=9.500
Q ss_pred HHHHHHhC
Q FD01845440_044 38 LQSWCEQC 45 (86)
Q Consensus 38 LQ~WC~~c 45 (86)
|+.||..|
T Consensus 9 L~~W~~~~ 16 (50)
T E0W1H7_PEDHC/1 9 LQEWCDSC 16 (50)
T ss_pred HHHHHHHH
No 6
>PF03185.19 ; CaKB ; Calcium-activated potassium channel, beta subunit
Probab=35.58 E-value=1.3e+02 Score=21.53 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=0.0 Template_Neff=9.400
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHh
Q FD01845440_044 9 GWGGFLASWPVMIAVNLAPVLVMLLTDNKLQSWCEQ 44 (86)
Q Consensus 9 ~~~~~lagw~v~i~i~~iq~li~~ftdndLQ~WC~~ 44 (86)
.....+..|.+.++++++-++..++-..-+..||++
T Consensus 156 ~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 191 (191)
T H3B6J3_LATCH/4 156 IIVFHCLFWPTLMLLGGVIIVSMVKLTQHLSRLCER 191 (191)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
No 7
>2LAQ_A Accessory gland-specific peptide 70A; hydroxiproline rich, SIGNALING PROTEIN; HET: HYP; NMR {N/A}
Probab=34.70 E-value=21 Score=21.02 Aligned_cols=13 Identities=23% Similarity=0.700 Sum_probs=0.0 Template_Neff=1.700
Q ss_pred CChHHHHHHHhCc
Q FD01845440_044 34 TDNKLQSWCEQCV 46 (86)
Q Consensus 34 tdndLQ~WC~~cv 46 (86)
+||+.++||+-+.
T Consensus 16 ~pn~rdKWCRLnL 28 (36)
T 2LAQ_A 16 SPNPRDKWCRLNL 28 (36)
T ss_dssp SCSTTSSCCSSCC
T ss_pred CCCcccccccccC
No 8
>8ESZ_BM NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial; NADH:ubiquinone oxidoreductase, TRANSLOCASE, OXIDOREDUCTASE; HET: FMN, C14, ZMP, WSF, NDP, 3PE, PC1, DGT, SF4, CDL, D12, U10;{Drosophila melanogaster}
Probab=34.01 E-value=62 Score=24.15 Aligned_cols=31 Identities=16% Similarity=0.367 Sum_probs=0.0 Template_Neff=5.600
Q ss_pred HHHHHHHHHHHHHHHHHCChHHHHHHHhCcc
Q FD01845440_044 17 WPVMIAVNLAPVLVMLLTDNKLQSWCEQCVF 47 (86)
Q Consensus 17 w~v~i~i~~iq~li~~ftdndLQ~WC~~cvF 47 (86)
..+++.+++...++.|..|-.+++|+.+-+|
T Consensus 81 ~~itl~lv~~~~~~~Y~PD~~~~dWa~REA~ 111 (150)
T 8ESZ_BM 81 VTVTLCLVWGSFYWAYLPDTQFRNWAQREGF 111 (150)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHH
No 9
>7DGZ_h NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial; respiratory, electron transport, OXIDOREDUCTASE; HET: PC1, NAP, FMN, CDL, SF4, 3PE; 3.8A {Bos taurus}
Probab=31.43 E-value=1.2e+02 Score=22.31 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=0.0 Template_Neff=4.900
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCChHHHHHHHhCcc
Q FD01845440_044 13 FLASWPVMIAVNLAPVLVMLLTDNKLQSWCEQCVF 47 (86)
Q Consensus 13 ~lagw~v~i~i~~iq~li~~ftdndLQ~WC~~cvF 47 (86)
...-..+++.+++...++.|+.|-.+++|..+-+|
T Consensus 60 ~~~F~~itl~lv~~~~~~~Y~PD~~~~dWa~REA~ 94 (125)
T 7DGZ_h 60 VVFFFGFSIVLVLGSTFVAYLPDYRMQEWARREAE 94 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccHHHHHHHH
No 10
>7VYS_e NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial; mammalian, mitochondrial, respiratory, complex I, ELECTRON TRANSPORT; HET: PLX, PEE, CDL, UQ, TYR, 8Q1, ADP; 2.5A {Sus scrofa}
Probab=31.40 E-value=1.3e+02 Score=21.25 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=0.0 Template_Neff=5.500
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCChHHHHHHHhCcc
Q FD01845440_044 13 FLASWPVMIAVNLAPVLVMLLTDNKLQSWCEQCVF 47 (86)
Q Consensus 13 ~lagw~v~i~i~~iq~li~~ftdndLQ~WC~~cvF 47 (86)
...-..+++.+++...++.|..|-.+++|+.+-+|
T Consensus 39 ~~~F~~~sl~lv~~~~~~~Y~Pd~~~~~Wa~REA~ 73 (104)
T 7VYS_e 39 VVFFFGFSIVLVLGSTFVAYLPDYRMQEWARREAE 73 (104)
T ss_dssp HHHCCCCCCCCCCHHHHHHTCCCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCChhhcHHHHHHHH
No 11
>8B9Z_g NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial; Mitochondrial complex I, Respiratory complex I, NADH:ubiquinone oxidoreductase, Ubiquinone, OXIDOREDUCTASE; HET: PC1, UQ9, FMN, CDL, NDP, SF4, 3PE, EHZ, 2MR, DGT; 3.28A {Drosophila melanogaster}
Probab=30.91 E-value=85 Score=22.26 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=0.0 Template_Neff=5.400
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCChHHHHHHHhCcc
Q FD01845440_044 13 FLASWPVMIAVNLAPVLVMLLTDNKLQSWCEQCVF 47 (86)
Q Consensus 13 ~lagw~v~i~i~~iq~li~~ftdndLQ~WC~~cvF 47 (86)
+..-..+++.+++...++.|..|-.+++|..+-++
T Consensus 35 ~~~F~~isi~lv~~~~~~~Y~PD~~~~dWa~REA~ 69 (108)
T 8B9Z_g 35 STFFVTVTLCLVWGSFYWAYLPDTQFRNWAQREGF 69 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccchhHHHHH
No 12
>PF20404.2 ; DUF6694 ; Family of unknown function (DUF6694)
Probab=30.86 E-value=93 Score=20.31 Aligned_cols=24 Identities=17% Similarity=0.220 Sum_probs=0.0 Template_Neff=8.700
Q ss_pred HHHhcccHHHHHHHHHHHHHHhhC
Q FD01845440_044 63 EEQRKTVEEEQQDKLEKALHEVFG 86 (86)
Q Consensus 63 ~~~~~~~~~eQ~~~f~kAl~~v~~ 86 (86)
...+....++|+++|++||..+..
T Consensus 34 ~~i~~~L~~~e~~~f~~Al~~l~~ 57 (103)
T A0A1M6C0E3_9VI 34 RKIAKALPENQKEEFSRAVMYFSM 57 (103)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHh
No 13
>PF14798.10 ; Ca_hom_mod ; Calcium homeostasis modulator
Probab=28.59 E-value=2.5e+02 Score=21.42 Aligned_cols=58 Identities=14% Similarity=0.173 Sum_probs=0.0 Template_Neff=8.700
Q ss_pred HhHhhhhhHHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHhCccCCCCCcccCCCCCCCHHHhcccHHHHHHHHHHHHHH
Q FD01845440_044 4 ARIVVGWGGFLASWPVMIAVNLAPVLVMLLTDNKLQSWCEQCVFGVNADEDVKNPRSLPEEQRKTVEEEQQDKLEKALHE 83 (86)
Q Consensus 4 ~r~l~~~~~~lagw~v~i~i~~iq~li~~ftdndLQ~WC~~cvFG~~~~~~~~~~~~y~~~~~~~~~~eQ~~~f~kAl~~ 83 (86)
.+... -+.||.+.++++++-.++ .+|.+|-...... ...| ...-.+++++.|++.+++
T Consensus 171 ~~~~S----q~~G~~ll~~~~~~~~~~---------~~~~~C~~~~~~~-----~~~y----~~~y~~~e~~~~~~~~~~ 228 (247)
T E1B9Q9_BOVIN/1 171 LTAHS----QVLGWVLIAVVIILLLIC---------TSITRCLSPVSYL-----QLKF----WKIYLQQEQQILKSQATE 228 (247)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHH---------HHHHhcCCCchHH-----HHHH----HHHHHHHHHHHHHHHHHH
No 14
>PF05859.16 ; Mis12 ; Mis12 protein
Probab=27.40 E-value=3.4e+02 Score=20.76 Aligned_cols=47 Identities=11% Similarity=0.225 Sum_probs=0.0 Template_Neff=8.300
Q ss_pred hHHHHHHHhCccCCCC------C----cccCCCCCCCHHHhcccHHHHHHHHHHHHHH
Q FD01845440_044 36 NKLQSWCEQCVFGVNA------D----EDVKNPRSLPEEQRKTVEEEQQDKLEKALHE 83 (86)
Q Consensus 36 ndLQ~WC~~cvFG~~~------~----~~~~~~~~y~~~~~~~~~~eQ~~~f~kAl~~ 83 (86)
|.++.||-+++|...+ . +.......+++++. ...+++.+.+.+.+..
T Consensus 76 d~fE~y~lrnif~IP~~l~~~~~v~Lp~~~~~~~~~~~~~~-~~ld~ei~~Lr~~i~~ 132 (239)
T A5DC07_PICGU/7 76 DKFELYALRNIFTIPQTLVEQGYVRLKHHSDVAVVSDDSEA-AAADERIQNLIKKINQ 132 (239)
T ss_pred HHHHHHHHHhccCCCHHHhcCCCeecccccCCCCCCCHHHH-HHHHHHHHHHHHHHHH
No 15
>PF14199.10 ; DUF4317 ; Domain of unknown function (DUF4317)
Probab=27.12 E-value=1.2e+02 Score=25.66 Aligned_cols=38 Identities=11% Similarity=0.218 Sum_probs=0.0 Template_Neff=6.200
Q ss_pred CChHHHHHHHhCccCCCCCcccCCCCCCCHHHhcccHHHHHHHHHHHHHHhhC
Q FD01845440_044 34 TDNKLQSWCEQCVFGVNADEDVKNPRSLPEEQRKTVEEEQQDKLEKALHEVFG 86 (86)
Q Consensus 34 tdndLQ~WC~~cvFG~~~~~~~~~~~~y~~~~~~~~~~eQ~~~f~kAl~~v~~ 86 (86)
++++++.=.-+.+||.+.. .+.++|.+.|++.|..++.
T Consensus 211 ~~~~~~~~fie~vl~~~~~---------------~ta~eqke~F~~il~~~~~ 248 (369)
T R6ZY15_9FIRM/1 211 NPEEPHQEFVTDILGCSLP---------------LTAGSQKETFQTLIEETLG 248 (369)
T ss_pred CCCCCCHHHHHHHhCCCCC---------------CCHHHHHHHHHHHHHHHhC
No 16
>7R47_g NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial; Complex I, OXIDOREDUCTASE; HET: FMN, MYR, 3PE, EHZ, SF4, 2MR, CDL, I49, GTP, FME, AYA, LMT, NDP, PC1; 2.3A {Bos taurus}
Probab=24.85 E-value=1.2e+02 Score=23.05 Aligned_cols=31 Identities=23% Similarity=0.427 Sum_probs=0.0 Template_Neff=4.600
Q ss_pred HHHHHHHHHHHHHHHHHCChHHHHHHHhCcc
Q FD01845440_044 17 WPVMIAVNLAPVLVMLLTDNKLQSWCEQCVF 47 (86)
Q Consensus 17 w~v~i~i~~iq~li~~ftdndLQ~WC~~cvF 47 (86)
..+.|++++...++.|+.|-.+++|..+-++
T Consensus 93 ~g~Si~lV~g~~f~~YlPD~~m~~Wa~REA~ 123 (154)
T 7R47_g 93 FGFSIVLVLGSTFVAYLPDYRMQEWARREAE 123 (154)
T ss_dssp CCCCCCCCCHHHHHHTCTTGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCChhhchHHHHHHH
No 17
>PF17867.5 ; AAA_lid_7 ; Midasin AAA lid domain
Probab=24.47 E-value=72 Score=19.16 Aligned_cols=12 Identities=17% Similarity=0.565 Sum_probs=0.0 Template_Neff=10.900
Q ss_pred HCChHHHHHHHh
Q FD01845440_044 33 LTDNKLQSWCEQ 44 (86)
Q Consensus 33 ftdndLQ~WC~~ 44 (86)
|+.-||.+||++
T Consensus 38 ~slRdl~r~~~r 49 (98)
T B7PT76_IXOSC/3 38 VSQRDLVKLCRR 49 (98)
T ss_pred CCHHHHHHHHHH
No 18
>PF10745.13 ; DUF2530 ; Protein of unknown function (DUF2530)
Probab=24.34 E-value=2.1e+02 Score=19.01 Aligned_cols=37 Identities=16% Similarity=0.258 Sum_probs=0.0 Template_Neff=6.300
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHhCccC
Q FD01845440_044 12 GFLASWPVMIAVNLAPVLVMLLTDNKLQSWCEQCVFG 48 (86)
Q Consensus 12 ~~lagw~v~i~i~~iq~li~~ftdndLQ~WC~~cvFG 48 (86)
.++.|-.+-++.+++-.+...+.++....|.--|+.|
T Consensus 16 v~~vGt~~W~va~vv~~~~~~~~~~~~~~wl~tc~~G 52 (81)
T F4CSB1_PSEUX/1 16 IASVGTLLWLAGAVGLLVAHIVGGRPLDLWFGTCVAG 52 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
No 19
>PF06936.15 ; Selenoprotein_S ; Selenoprotein S (SelS)
Probab=24.22 E-value=2e+02 Score=21.99 Aligned_cols=28 Identities=11% Similarity=0.291 Sum_probs=0.0 Template_Neff=6.700
Q ss_pred HHHHHHHHHHHHHHHHHHCChHHH-HHHHh
Q FD01845440_044 16 SWPVMIAVNLAPVLVMLLTDNKLQ-SWCEQ 44 (86)
Q Consensus 16 gw~v~i~i~~iq~li~~ftdndLQ-~WC~~ 44 (86)
||.+.++++++-+++..+.+. +. .|-.+
T Consensus 39 GW~il~~~v~~~~l~~k~~~~-~~~~~~~~ 67 (195)
T A7SN64_NEMVE/1 39 GWFLVLGIVISAVIWSKVRPH-WQRMMKKR 67 (195)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHh
No 20
>PF04210.17 ; MtrG ; Tetrahydromethanopterin S-methyltransferase, subunit G
Probab=23.80 E-value=2.2e+02 Score=18.02 Aligned_cols=24 Identities=17% Similarity=0.055 Sum_probs=0.0 Template_Neff=6.300
Q ss_pred hHhHhhhhhHHHHHHHHHHHHHHHHHHH
Q FD01845440_044 3 IARIVVGWGGFLASWPVMIAVNLAPVLV 30 (86)
Q Consensus 3 ~~r~l~~~~~~lagw~v~i~i~~iq~li 30 (86)
++|..+ ++.|.-++++++++-+++
T Consensus 41 ~gr~~G----i~iG~~~alil~~i~~~~ 64 (64)
T D5E7Y9_METMS/9 41 VGRDIG----ILYGAVAGILMFLLYISI 64 (64)
T ss_pred HHHHHH----HHHHHHHHHHHHHHHHhC
No 21
>PF05517.16 ; p25-alpha ; p25-alpha
Probab=23.41 E-value=1.2e+02 Score=21.38 Aligned_cols=52 Identities=13% Similarity=0.277 Sum_probs=0.0 Template_Neff=8.700
Q ss_pred HCChHHHHHHHhC-ccCCCCCcccCCCCCCCHHHhcccHHHHHHHHHHHHHHh
Q FD01845440_044 33 LTDNKLQSWCEQC-VFGVNADEDVKNPRSLPEEQRKTVEEEQQDKLEKALHEV 84 (86)
Q Consensus 33 ftdndLQ~WC~~c-vFG~~~~~~~~~~~~y~~~~~~~~~~eQ~~~f~kAl~~v 84 (86)
++...+.+||+.| +++...-.......-|+.........---++|.++|..+
T Consensus 20 m~~~~~~K~~kd~~l~~~~~~t~~~~di~F~k~~~~~~~~i~~~~F~~~L~~l 72 (156)
T F6WLJ7_MONDO/8 20 MHGKNWSKLCKDCQVIDGKNVTTTDVDIVFSKIKGKSCRTITFEQFKEALEEL 72 (156)
T ss_pred CChhHHHHHHHhCCCccCCccchhhhHhhhhccCCCCCCeeCHHHHHHHHHHH
No 22
>6UIW_I Calcium homeostasis modulator protein 2; calcium homeostasis modulator, CALHM2, ruthenium red, TRANSPORT PROTEIN-INHIBITOR complex; HET: R2R; 2.7A {Homo sapiens}
Probab=23.22 E-value=4.4e+02 Score=21.50 Aligned_cols=58 Identities=9% Similarity=0.110 Sum_probs=0.0 Template_Neff=7.800
Q ss_pred HhHhhhhhHHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHhCccCCCCCcccCCCCCCCHHHhcccHHHHHHHHHHHHHH
Q FD01845440_044 4 ARIVVGWGGFLASWPVMIAVNLAPVLVMLLTDNKLQSWCEQCVFGVNADEDVKNPRSLPEEQRKTVEEEQQDKLEKALHE 83 (86)
Q Consensus 4 ~r~l~~~~~~lagw~v~i~i~~iq~li~~ftdndLQ~WC~~cvFG~~~~~~~~~~~~y~~~~~~~~~~eQ~~~f~kAl~~ 83 (86)
.|... -+.||.+.++++++-+++ .+|.+|--....- ...| ...-.+++++.|++.+++
T Consensus 180 l~~~S----QviGw~li~~i~~~~~i~---------~c~~~C~s~~s~~-----q~~y----~~~y~~~E~~~fe~~~ke 237 (331)
T 6UIW_I 180 LRYES----QLFGWLLIGVVAILVFLT---------KCLKHYCSPLSYR-----QEAY----WAQYRANEDQLFQRTAEV 237 (331)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHHH---------HHHHHHHCSSCHH-----HHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHH---------HHHHHhCCCCchh-----HHHH----HHHHHHHHHHHHHHHHHH
No 23
>4L1P_B RNA polymerase-associated protein RTF1 homolog; Tutor, Plus3, Peptide binding protein, Spt5 CTR binding, Transcription, Paf1 complex, Rtf1, ORF association region, Chromatin; HET: GOL; 2.12A {Homo sapiens} SCOP: b.34.21.1, l.1.1.1
Probab=23.02 E-value=1.4e+02 Score=20.70 Aligned_cols=37 Identities=16% Similarity=0.231 Sum_probs=0.0 Template_Neff=8.600
Q ss_pred HCChHHHHHHHhCccCCCCCcccCCCCCCCHHHhcccHHHHHHHHHHHH
Q FD01845440_044 33 LTDNKLQSWCEQCVFGVNADEDVKNPRSLPEEQRKTVEEEQQDKLEKAL 81 (86)
Q Consensus 33 ftdndLQ~WC~~cvFG~~~~~~~~~~~~y~~~~~~~~~~eQ~~~f~kAl 81 (86)
+++.|++.|...+.-+..+- ++- ...++...++.+||
T Consensus 101 ~t~~E~~~~~~~~~~~~~~l------Pt~------~~v~~K~~~l~~a~ 137 (138)
T 4L1P_B 101 FTESEFMKWKEAMFSAGMQL------PTL------DEINKKELSIKEAL 137 (138)
T ss_dssp CCHHHHHHHHHHHHHHTCCC------CBH------HHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHCCCCC------CCH------HHHHHHHHHHHHHh
No 24
>PF09472.14 ; MtrF ; Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF)
Probab=22.73 E-value=2.2e+02 Score=17.99 Aligned_cols=24 Identities=17% Similarity=0.350 Sum_probs=0.0 Template_Neff=6.200
Q ss_pred hHhHhhhhhHHHHHHHHHHHHHH-HHHHH
Q FD01845440_044 3 IARIVVGWGGFLASWPVMIAVNL-APVLV 30 (86)
Q Consensus 3 ~~r~l~~~~~~lagw~v~i~i~~-iq~li 30 (86)
++|..+ ++.|.-+++++++ +..++
T Consensus 39 ~gr~~G----i~~G~i~alil~~~~p~~~ 63 (63)
T MTRF_METAC/10- 39 STGIIG----FAAGFLFSLLMVIILPLMA 63 (63)
T ss_pred HHHHHH----HHHHHHHHHHHHHHHHhhC
No 25
>PF02416.20 ; TatA_B_E ; mttA/Hcf106 family
Probab=22.65 E-value=2.7e+02 Score=16.13 Aligned_cols=28 Identities=14% Similarity=0.294 Sum_probs=0.0 Template_Neff=8.000
Q ss_pred HHHHHHHHHHHHHHHHHHHHCChHHHHHHHh
Q FD01845440_044 14 LASWPVMIAVNLAPVLVMLLTDNKLQSWCEQ 44 (86)
Q Consensus 14 lagw~v~i~i~~iq~li~~ftdndLQ~WC~~ 44 (86)
+..|++.++++ +++-+|.|.+|-+..+.
T Consensus 1 ig~~ellii~~---v~~l~~Gp~~lp~~~r~ 28 (53)
T TATA2_AQUAE/6- 1 ISMTELIIILA---VILLLFGAGRLPEAGRA 28 (53)
T ss_pred CCHHHHHHHHH---HHHHHHCcchHHHHHHH
No 26
>PF10281.13 ; Ish1 ; Putative nuclear envelope organisation protein
Probab=22.57 E-value=92 Score=16.64 Aligned_cols=13 Identities=31% Similarity=0.486 Sum_probs=0.0 Template_Neff=8.300
Q ss_pred HCChHHHHHHHhC
Q FD01845440_044 33 LTDNKLQSWCEQC 45 (86)
Q Consensus 33 ftdndLQ~WC~~c 45 (86)
.++++|..|+...
T Consensus 4 Ws~~~L~~wL~~~ 16 (38)
T Q75BC7_ASHGO/2 4 WPLDSLRSWLEVH 16 (38)
T ss_pred CCHHHHHHHHHHC
No 27
>6UMM_D ESX-3 secretion system ATPase EccB3; ESX, secretion system, type VII secretion system, mycobacteria, complex, membrane protein, TRANSPORT PROTEIN;{Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)}
Probab=22.52 E-value=3.4e+02 Score=17.93 Aligned_cols=24 Identities=8% Similarity=0.126 Sum_probs=0.0 Template_Neff=6.400
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCC
Q FD01845440_044 12 GFLASWPVMIAVNLAPVLVMLLTD 35 (86)
Q Consensus 12 ~~lagw~v~i~i~~iq~li~~ftd 35 (86)
+.++|..+.+++++.-.++-+++|
T Consensus 58 a~~~G~~~a~l~~~g~~v~g~l~P 81 (81)
T 6UMM_D 58 AVLTGALILVTGLVGCFIFSLFRP 81 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
No 28
>8GMP_F Calcium homeostasis modulator protein 1; taste, assembly, calcium homeostasis modulator protein, membrane protein, channel, lipid binding, large-pore channel; HET: POV; 2.8A {Homo sapiens}
Probab=22.39 E-value=1.6e+02 Score=23.92 Aligned_cols=58 Identities=12% Similarity=0.165 Sum_probs=0.0 Template_Neff=7.300
Q ss_pred HhHhhhhhHHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHhCccCCCCCcccCCCCCCCHHHhcccHHHHHHHHHHHHHH
Q FD01845440_044 4 ARIVVGWGGFLASWPVMIAVNLAPVLVMLLTDNKLQSWCEQCVFGVNADEDVKNPRSLPEEQRKTVEEEQQDKLEKALHE 83 (86)
Q Consensus 4 ~r~l~~~~~~lagw~v~i~i~~iq~li~~ftdndLQ~WC~~cvFG~~~~~~~~~~~~y~~~~~~~~~~eQ~~~f~kAl~~ 83 (86)
.|... -+.||.+.++++++-.++..+ ...|.+..|-..+- -+.| .+++++.|++.+.+
T Consensus 180 lr~~S----Q~iGw~lll~~ii~a~l~~~i-----~~C~s~~~~lq~~Y-----w~~Y--------~d~E~k~fee~~~e 237 (314)
T 8GMP_F 180 LRCIS----QALGWSFVLLTTLLAFVVRSV-----RPCFTQAAFLKSKY-----WSHY--------IDIERKLFDETCTE 237 (314)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHTGGGTT-----CTTCCHHHHHHHHH-----HHHH--------HHHHHHHHHHHHTT
T ss_pred HHHHc----hHHHHHHHHHHHHHHHHHHHH-----HhhCCCcHHHHHHH-----HHHH--------HHHHHHHHHHHHHH
No 29
>3VEA_B Macrodomain Ter protein; macrodomains, chromosome, DNA condensation, DNA BINDING PROTEIN-DNA complex; 2.55A {Yersinia pestis}
Probab=21.94 E-value=99 Score=22.85 Aligned_cols=13 Identities=23% Similarity=0.534 Sum_probs=0.0 Template_Neff=6.300
Q ss_pred CChHHHHHHHhCc
Q FD01845440_044 34 TDNKLQSWCEQCV 46 (86)
Q Consensus 34 tdndLQ~WC~~cv 46 (86)
.+..|+.||++..
T Consensus 50 ~~~~l~~Wce~~L 62 (151)
T 3VEA_B 50 EPVKVQEWIDAHM 62 (151)
T ss_dssp CHHHHHHHHHHHB
T ss_pred CHHHHHHHHHHhC
No 30
>6SEI_B Structure-specific endonuclease subunit SLX4; Resolvase, Structure-Selective endonuclease, Endonuclease, DNA BINDING PROTEIN; 2.69A {Thielavia terrestris}
Probab=21.66 E-value=89 Score=22.09 Aligned_cols=13 Identities=23% Similarity=0.838 Sum_probs=0.0 Template_Neff=5.200
Q ss_pred HCChHHHHHHHhC
Q FD01845440_044 33 LTDNKLQSWCEQC 45 (86)
Q Consensus 33 ftdndLQ~WC~~c 45 (86)
++++.+++||+..
T Consensus 74 v~~~~Vr~WCd~~ 86 (104)
T 6SEI_B 74 VAPGDVKKWCESK 86 (104)
T ss_dssp CCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHc
No 31
>6LMT_B Calcium homeostasis modulator 1; channel, MEMBRANE PROTEIN; HET: Y01; 2.66A {Oryzias latipes}
Probab=21.35 E-value=3.6e+02 Score=21.65 Aligned_cols=58 Identities=7% Similarity=0.182 Sum_probs=0.0 Template_Neff=7.900
Q ss_pred HhHhhhhhHHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHhCccCCCCCcccCCCCCCCHHHhcccHHHHHHHHHHHHHH
Q FD01845440_044 4 ARIVVGWGGFLASWPVMIAVNLAPVLVMLLTDNKLQSWCEQCVFGVNADEDVKNPRSLPEEQRKTVEEEQQDKLEKALHE 83 (86)
Q Consensus 4 ~r~l~~~~~~lagw~v~i~i~~iq~li~~ftdndLQ~WC~~cvFG~~~~~~~~~~~~y~~~~~~~~~~eQ~~~f~kAl~~ 83 (86)
.|... -+.||.+.++++++-.++ .+|.+|--....- ..+| .+.-.+++++.|++.+++
T Consensus 177 l~~~S----Q~iGw~ll~~~~i~~~l~---------~~~~~C~~~~~~~-----q~~y----w~~Y~~~E~k~fee~~~e 234 (301)
T 6LMT_B 177 IKCIS----QACGWMFLLMMTFTAFLI---------RAIRPCFTQAAFL-----KTKY----WSHYIDIERKMFDETCKE 234 (301)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHHH---------HHHGGGTSCSHHH-----HHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHc----hhhHHHHHHHHHHHHHHH---------HHHHHhCCCchHH-----HHHH----HHHHHHHHHHHHHHHHHH
No 32
>PF02234.23 ; CDI ; Cyclin-dependent kinase inhibitor
Probab=21.23 E-value=1.2e+02 Score=16.93 Aligned_cols=29 Identities=21% Similarity=0.336 Sum_probs=0.0 Template_Neff=8.900
Q ss_pred CccCCCCCcccCCCCCCCHHHhcccHHHHHHHHHH
Q FD01845440_044 45 CVFGVNADEDVKNPRSLPEEQRKTVEEEQQDKLEK 79 (86)
Q Consensus 45 cvFG~~~~~~~~~~~~y~~~~~~~~~~eQ~~~f~k 79 (86)
|.||..++ ..-.........+++++++.+
T Consensus 1 ~LFg~~~~------~~e~~~~~~~~~~~~~~~~~~ 29 (50)
T E9HLZ7_DAPPU/4 1 CLFGLPSS------PEEALQQAADELQRQTESDSK 29 (50)
T ss_pred CCCCCCCC------HHHHHHHHHHHHHHHHHHHHH
No 33
>PF14141.10 ; YqzM ; YqzM-like protein
Probab=21.21 E-value=3.3e+02 Score=16.55 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=0.0 Template_Neff=4.000
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHHHC
Q FD01845440_044 6 IVVGWGGFLASWPVMIAVNLAPVLVMLLT 34 (86)
Q Consensus 6 ~l~~~~~~lagw~v~i~i~~iq~li~~ft 34 (86)
.++ +..+...+.+|++|-.+|.++.
T Consensus 18 ~~G----F~vsFgff~~IFiia~ii~~~~ 42 (42)
T Q8EPV8_OCEIH/2 18 IKG----FTFSFLFFFLIFAIGVVISFIG 42 (42)
T ss_pred HHH----HHHHHHHHHHHHHHHHHHHHhC
No 34
>5OEN_B Signal transducer and activator of transcription; STAT2, IRF9, TRANSCRIPTION; 2.919A {Mus musculus}
Probab=20.13 E-value=1.1e+02 Score=21.52 Aligned_cols=9 Identities=22% Similarity=0.767 Sum_probs=0.0 Template_Neff=9.300
Q ss_pred hHHHHHHHh
Q FD01845440_044 36 NKLQSWCEQ 44 (86)
Q Consensus 36 ndLQ~WC~~ 44 (86)
|.+|+||+.
T Consensus 116 d~iQ~w~e~ 124 (175)
T 5OEN_B 116 EQLEQWLTA 124 (175)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH